Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03320

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
3,497,863	+				+0.8
3,497,916	+				+1.0
3,497,917	-				+0.5
3,497,924	-				+1.9
3,498,002	+				-0.7
3,498,022	+		CCNA_03319	0.11	-0.2
3,498,065	-		CCNA_03319	0.17	+1.1
3,498,082	-		CCNA_03319	0.19	+0.7
3,498,092	+		CCNA_03319	0.20	+0.4
3,498,102	+		CCNA_03319	0.21	-0.2
3,498,107	+		CCNA_03319	0.22	-1.4
3,498,133	-		CCNA_03319	0.25	+1.2
3,498,140	-		CCNA_03319	0.26	+2.3
3,498,155	-		CCNA_03319	0.28	+1.4
3,498,162	+		CCNA_03319	0.29	+1.8
3,498,214	-		CCNA_03319	0.35	+0.2
3,498,220	+		CCNA_03319	0.36	-0.9
3,498,228	-		CCNA_03319	0.37	+0.5
3,498,264	-		CCNA_03319	0.41	+1.0
3,498,269	-		CCNA_03319	0.42	+1.1
3,498,285	+		CCNA_03319	0.44	+0.1
3,498,293	-		CCNA_03319	0.45	+1.8
3,498,301	-		CCNA_03319	0.46	+0.6
3,498,330	-		CCNA_03319	0.50	+0.3
3,498,330	-		CCNA_03319	0.50	+0.6
3,498,349	-		CCNA_03319	0.52	+0.3
3,498,387	+		CCNA_03319	0.57	-1.3
3,498,417	-		CCNA_03319	0.61	-0.0
3,498,450	+		CCNA_03319	0.65	-2.0
3,498,455	+		CCNA_03319	0.65	-1.3
3,498,455	+		CCNA_03319	0.65	-1.5
3,498,463	-		CCNA_03319	0.66	-0.4
3,498,463	-		CCNA_03319	0.66	+0.6
3,498,489	+		CCNA_03319	0.70	+0.3
3,498,496	+		CCNA_03319	0.70	-2.1
3,498,546	+		CCNA_03319	0.77	-0.4
3,498,556	+		CCNA_03319	0.78	+1.4
3,498,561	+		CCNA_03319	0.79	-0.1
3,498,561	+		CCNA_03319	0.79	-2.0
3,498,569	-		CCNA_03319	0.80	-1.3
3,498,631	-		CCNA_03319	0.87	+1.5
3,498,641	-		CCNA_03319	0.89	+0.2
3,498,690	-				+0.9
3,498,695	-				+0.7
3,498,768	-				-0.1
3,498,773	+				+1.2
3,498,799	-				+0.4
3,498,837	+				-0.1
3,498,852	+				-1.1
3,498,919	+				-0.7
3,498,927	-				-0.8
3,499,000	-				-0.7
3,499,009	+				-0.2
3,499,010	-				+0.8
3,499,015	+				-1.1
3,499,055	+				+0.8
3,499,060	+				-0.2
3,499,060	+				-0.0
3,499,063	-				+0.5
3,499,063	-				-0.5
3,499,082	+				-0.7
3,499,128	-				-0.1
3,499,128	-				-2.1
3,499,132	+				+0.3
3,499,252	-		CCNA_03320	0.13	+0.2
3,499,288	-		CCNA_03320	0.14	-0.8
3,499,343	+		CCNA_03320	0.15	-0.1
3,499,343	+		CCNA_03320	0.15	+0.8
3,499,388	+		CCNA_03320	0.17	+3.8
3,499,394	+		CCNA_03320	0.17	-1.2
3,499,504	-		CCNA_03320	0.20	-0.4
3,499,533	+		CCNA_03320	0.21	-1.9
3,499,533	+		CCNA_03320	0.21	+3.4
3,499,533	+		CCNA_03320	0.21	-0.2
3,499,533	+		CCNA_03320	0.21	-0.1
3,499,541	-		CCNA_03320	0.22	+0.9
3,499,594	-		CCNA_03320	0.23	-0.9
3,499,594	-		CCNA_03320	0.23	+0.6
3,499,594	-		CCNA_03320	0.23	-0.5
3,499,609	+		CCNA_03320	0.24	-1.9
3,499,659	-		CCNA_03320	0.25	-1.3
3,499,666	+		CCNA_03320	0.25	+0.3
3,499,725	+		CCNA_03320	0.27	+0.3
3,499,733	-		CCNA_03320	0.28	-2.4
3,499,742	-		CCNA_03320	0.28	-0.5
3,499,744	+		CCNA_03320	0.28	+1.8
3,499,757	+		CCNA_03320	0.28	+0.2
3,499,765	-		CCNA_03320	0.29	-1.2
3,499,801	+		CCNA_03320	0.30	-0.6
3,499,806	+		CCNA_03320	0.30	+0.7
3,499,806	+		CCNA_03320	0.30	-1.8
3,499,814	-		CCNA_03320	0.30	+1.0
3,499,814	-		CCNA_03320	0.30	-0.9
3,499,816	+		CCNA_03320	0.30	-0.9
3,499,816	+		CCNA_03320	0.30	-0.4
3,499,824	-		CCNA_03320	0.30	-1.0
3,499,858	+		CCNA_03320	0.31	-1.2
3,499,858	+		CCNA_03320	0.31	-0.0
3,499,918	+		CCNA_03320	0.33	-1.8
3,499,938	+		CCNA_03320	0.34	-0.5
3,499,951	+		CCNA_03320	0.34	+1.5
3,499,991	+		CCNA_03320	0.35	-0.2
3,499,991	+		CCNA_03320	0.35	-0.0
3,499,991	+		CCNA_03320	0.35	-1.2
3,499,991	+		CCNA_03320	0.35	+1.4
3,499,991	+		CCNA_03320	0.35	+3.1
3,499,999	-		CCNA_03320	0.36	+1.2
3,499,999	-		CCNA_03320	0.36	-0.2
3,499,999	-		CCNA_03320	0.36	-0.7
3,499,999	-		CCNA_03320	0.36	+0.5
3,499,999	-		CCNA_03320	0.36	-0.4
3,499,999	-		CCNA_03320	0.36	+0.2
3,500,076	+		CCNA_03320	0.38	+2.4
3,500,101	-		CCNA_03320	0.39	+2.2
3,500,116	-		CCNA_03320	0.39	+0.2
3,500,131	-		CCNA_03320	0.40	-1.4
3,500,136	-		CCNA_03320	0.40	+0.4
3,500,155	+		CCNA_03320	0.41	+0.1
3,500,184	+		CCNA_03320	0.41	+0.3
3,500,212	+		CCNA_03320	0.42	+1.2
3,500,252	+		CCNA_03320	0.44	-0.4
3,500,252	-		CCNA_03320	0.44	+1.1
3,500,253	-		CCNA_03320	0.44	-0.4
3,500,263	+		CCNA_03320	0.44	+0.2
3,500,273	+		CCNA_03320	0.44	-0.7
3,500,321	+		CCNA_03320	0.46	+1.2
3,500,344	+		CCNA_03320	0.46	-0.3
3,500,344	+		CCNA_03320	0.46	-2.5
3,500,347	-		CCNA_03320	0.46	-2.0
3,500,347	-		CCNA_03320	0.46	-0.5
3,500,394	+		CCNA_03320	0.48	-1.7
3,500,474	-		CCNA_03320	0.50	+1.2
3,500,499	+		CCNA_03320	0.51	+0.9
3,500,514	+		CCNA_03320	0.52	-1.1
3,500,529	+		CCNA_03320	0.52	-0.5
3,500,529	+		CCNA_03320	0.52	+2.1
3,500,576	-		CCNA_03320	0.54	-0.2
3,500,578	+		CCNA_03320	0.54	-2.8
3,500,584	+		CCNA_03320	0.54	+0.7
3,500,611	+		CCNA_03320	0.55	-1.1
3,500,611	+		CCNA_03320	0.55	-0.4
3,500,611	+		CCNA_03320	0.55	-2.6
3,500,619	-		CCNA_03320	0.55	-0.8
3,500,646	+		CCNA_03320	0.56	-0.7
3,500,659	-		CCNA_03320	0.56	+0.1
3,500,700	-		CCNA_03320	0.57	-1.1
3,500,703	+		CCNA_03320	0.57	-1.6
3,500,710	-		CCNA_03320	0.58	+1.5
3,500,716	+		CCNA_03320	0.58	+0.6
3,500,723	+		CCNA_03320	0.58	-1.5
3,500,724	-		CCNA_03320	0.58	-0.9
3,500,787	-		CCNA_03320	0.60	-0.1
3,500,822	+		CCNA_03320	0.61	+0.4
3,500,825	-		CCNA_03320	0.61	-1.8
3,500,835	+		CCNA_03320	0.62	-1.6
3,500,836	-		CCNA_03320	0.62	-0.0
3,500,836	-		CCNA_03320	0.62	-1.5
3,500,856	-		CCNA_03320	0.62	-0.3
3,500,883	-		CCNA_03320	0.63	-1.5
3,500,888	-		CCNA_03320	0.63	-1.5
3,500,907	-		CCNA_03320	0.64	-0.8
3,500,934	+		CCNA_03320	0.65	-0.6
3,501,003	-		CCNA_03320	0.67	-2.4
3,501,015	+		CCNA_03320	0.67	-0.8
3,501,020	-		CCNA_03320	0.67	-0.6
3,501,023	-		CCNA_03320	0.67	+1.6
3,501,025	-		CCNA_03320	0.67	+1.4
3,501,106	+		CCNA_03320	0.70	+0.2
3,501,133	+		CCNA_03320	0.71	-0.0
3,501,134	+		CCNA_03320	0.71	-0.9
3,501,152	-		CCNA_03320	0.71	-1.1
3,501,154	+		CCNA_03320	0.71	-1.2
3,501,162	-		CCNA_03320	0.72	-1.7
3,501,183	+		CCNA_03320	0.72	-0.7
3,501,191	-		CCNA_03320	0.73	+0.8
3,501,192	+		CCNA_03320	0.73	-1.6
3,501,201	-		CCNA_03320	0.73	-2.8
3,501,271	+		CCNA_03320	0.75	-2.2
3,501,286	+		CCNA_03320	0.76	-1.4
3,501,321	+		CCNA_03320	0.77	-0.7
3,501,378	-		CCNA_03320	0.78	-0.9
3,501,380	-		CCNA_03320	0.78	-0.7
3,501,380	-		CCNA_03320	0.78	-0.7
3,501,380	-		CCNA_03320	0.78	-0.0
3,501,380	-		CCNA_03320	0.78	-1.2
3,501,380	-		CCNA_03320	0.78	-0.2
3,501,380	-		CCNA_03320	0.78	-1.0
3,501,380	-		CCNA_03320	0.78	-0.6
3,501,380	-		CCNA_03320	0.78	-1.1
3,501,420	+		CCNA_03320	0.80	-0.2
3,501,468	+		CCNA_03320	0.81	-0.5
3,501,471	+		CCNA_03320	0.81	-2.0
3,501,499	-		CCNA_03320	0.82	-1.2
3,501,499	-		CCNA_03320	0.82	+0.7
3,501,535	-		CCNA_03320	0.83	-1.3
3,501,564	+		CCNA_03320	0.84	-0.8
3,501,566	+		CCNA_03320	0.84	-0.0
3,501,590	+		CCNA_03320	0.85	-1.8
3,501,596	+		CCNA_03320	0.85	-2.1
3,501,596	+		CCNA_03320	0.85	+0.3
3,501,604	-		CCNA_03320	0.85	+0.1
3,501,604	-		CCNA_03320	0.85	-0.4
3,501,604	-		CCNA_03320	0.85	-0.6
3,501,687	-		CCNA_03320	0.88	-0.7
3,501,687	-		CCNA_03320	0.88	+0.3
3,501,690	+		CCNA_03320	0.88	-1.0
3,501,697	+		CCNA_03320	0.88	+0.9
3,501,705	-		CCNA_03320	0.88	-1.4
3,501,720	-		CCNA_03320	0.89	-1.4
3,501,728	+		CCNA_03320	0.89	-0.1
3,501,735	+		CCNA_03320	0.89	-0.5
3,501,735	+		CCNA_03320	0.89	-2.9
3,501,735	+		CCNA_03320	0.89	-1.1
3,501,748	-		CCNA_03320	0.90	+0.5
3,501,749	+		CCNA_03320	0.90	+0.8
3,501,756	-				+1.6
3,501,837	-				+1.7
3,501,846	+				-1.5
3,501,863	+				-1.0
3,501,884	-				+2.1
3,501,903	-				+0.8
3,501,914	-				+1.0
3,501,925	+				-0.2
3,501,925	+				+0.4
3,501,925	+				+0.5
3,501,933	-				+1.2
3,501,933	-				+0.8
3,501,933	-				-0.3
3,501,933	-				-1.8
3,501,933	-				+0.9
3,501,933	-				-0.1
3,501,933	-				+0.4
3,501,933	-				-2.2
3,501,988	-				-0.5
3,501,988	-				-0.0
3,502,003	+				+0.1
3,502,045	-				-1.1
3,502,048	+				-0.3
3,502,056	-				+0.7
3,502,072	+				+1.0
3,502,085	-				+0.6
3,502,100	-				+1.1
3,502,125	+				-1.5
3,502,160	-		CCNA_03321	0.12	+2.1
3,502,174	-		CCNA_03321	0.16	+2.9
3,502,174	-		CCNA_03321	0.16	+1.2
3,502,183	+		CCNA_03321	0.19	-0.2
3,502,199	-		CCNA_03321	0.23	+2.1
3,502,200	+		CCNA_03321	0.23	-0.8
3,502,228	+		CCNA_03321	0.31	+0.8
3,502,261	+		CCNA_03321	0.40	-0.2
3,502,261	+		CCNA_03321	0.40	-2.5
3,502,269	-		CCNA_03321	0.42	+1.5
3,502,302	-		CCNA_03321	0.51	+2.5
3,502,321	+		CCNA_03321	0.56	-0.2
3,502,366	+		CCNA_03321	0.68	+0.6
3,502,374	-		CCNA_03321	0.70	+2.0
3,502,374	-		CCNA_03321	0.70	+0.3
3,502,374	-		CCNA_03321	0.70	+1.1
3,502,409	+		CCNA_03321	0.80	+0.5
3,502,417	-		CCNA_03321	0.82	+1.0
3,502,425	-		CCNA_03321	0.84	+3.0
3,502,443	-		CCNA_03321	0.89	+0.5
3,502,507	-				+0.7
3,502,521	-				+0.2
3,502,522	-				+0.8
3,502,523	+				+0.6
3,502,534	-				+0.6
3,502,568	+				-0.7
3,502,568	-				+0.5
3,502,570	-				-0.2
3,502,651	+				-1.1
3,502,651	+				-1.0
3,502,651	+				-1.7
3,502,651	+				-1.1
3,502,659	-				-1.7
3,502,659	-				-1.9
3,502,675	+				-0.1
3,502,688	+				-2.4
3,502,714	-				-0.8
3,502,719	-				+0.5
3,502,765	-				-2.4
3,502,773	+				-1.6
3,502,812	+		CCNA_03322	0.12	+0.3
3,502,830	-		CCNA_03322	0.13	+0.3
3,502,855	+		CCNA_03322	0.14	-1.8
3,502,855	-		CCNA_03322	0.14	+0.8
3,502,863	-		CCNA_03322	0.15	+1.8
3,502,869	+		CCNA_03322	0.15	-1.8
3,502,882	+		CCNA_03322	0.16	-0.7
3,502,882	+		CCNA_03322	0.16	-0.4
3,502,890	-		CCNA_03322	0.17	+0.6
3,502,946	+		CCNA_03322	0.20	-2.8
3,502,957	-		CCNA_03322	0.21	-2.8
3,502,977	+		CCNA_03322	0.22	-1.5
3,502,985	-		CCNA_03322	0.23	-2.2
3,502,985	-		CCNA_03322	0.23	-2.6
3,502,985	-		CCNA_03322	0.23	-0.9
3,503,040	+		CCNA_03322	0.26	-2.1
3,503,053	-		CCNA_03322	0.27	-2.6
3,503,064	-				+2.8