Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03186

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
3,345,566	+		CCNA_03184	0.89	+0.8
3,345,569	-		CCNA_03184	0.89	-1.0
3,345,631	-				-0.1
3,345,648	+				-1.1
3,345,656	-				-1.3
3,345,666	-				+0.6
3,345,696	-				-1.4
3,345,707	+				-0.8
3,345,744	+				-2.1
3,345,746	-				-1.7
3,345,749	+				-0.3
3,345,757	-				-0.1
3,345,813	+				-1.8
3,345,906	+				-0.5
3,345,924	+		CCNA_03185	0.11	-1.2
3,345,954	+		CCNA_03185	0.16	-0.7
3,345,984	+		CCNA_03185	0.21	+1.6
3,346,015	-		CCNA_03185	0.26	-0.9
3,346,113	-		CCNA_03185	0.41	-0.8
3,346,130	+		CCNA_03185	0.44	+0.5
3,346,133	+		CCNA_03185	0.45	-0.4
3,346,142	+		CCNA_03185	0.46	-1.9
3,346,146	+		CCNA_03185	0.47	+0.5
3,346,148	+		CCNA_03185	0.47	-2.5
3,346,154	-		CCNA_03185	0.48	-1.7
3,346,154	-		CCNA_03185	0.48	-0.6
3,346,158	+		CCNA_03185	0.49	+0.2
3,346,204	-		CCNA_03185	0.56	+0.4
3,346,215	-		CCNA_03185	0.58	+0.4
3,346,250	-		CCNA_03185	0.63	-0.2
3,346,279	+		CCNA_03185	0.68	-1.7
3,346,289	+		CCNA_03185	0.70	-0.5
3,346,312	+		CCNA_03185	0.73	-0.5
3,346,320	-		CCNA_03185	0.74	-0.9
3,346,335	+		CCNA_03185	0.77	-1.3
3,346,370	-		CCNA_03185	0.82	+0.2
3,346,376	-		CCNA_03185	0.83	+0.8
3,346,422	-				-0.5
3,346,429	+				+1.4
3,346,437	-				+0.2
3,346,439	-				-0.8
3,346,446	+				+1.0
3,346,446	+				+0.8
3,346,450	-				+0.4
3,346,454	-				-1.6
3,346,454	-				+0.4
3,346,491	+				+0.7
3,346,493	-				+0.4
3,346,498	+				+0.9
3,346,498	+				+0.5
3,346,529	-				+2.6
3,346,562	+				+1.0
3,346,562	+				-0.3
3,346,562	+				-0.8
3,346,562	+				+1.5
3,346,570	-				+4.1
3,346,570	-				-1.4
3,346,575	-				+0.7
3,346,576	-				-0.3
3,346,584	+				+0.2
3,346,585	+				+1.8
3,346,593	-				+1.2
3,346,627	-		CCNA_03186	0.13	+0.8
3,346,627	-		CCNA_03186	0.13	+0.6
3,346,632	+		CCNA_03186	0.13	-0.9
3,346,632	+		CCNA_03186	0.13	-0.6
3,346,632	+		CCNA_03186	0.13	-1.7
3,346,640	-		CCNA_03186	0.14	+1.0
3,346,640	-		CCNA_03186	0.14	+0.9
3,346,653	+				+0.5
3,346,683	-		CCNA_03186	0.18	+0.4
3,346,696	-		CCNA_03186	0.19	+1.2
3,346,716	+		CCNA_03186	0.21	+2.5
3,346,724	-		CCNA_03186	0.21	-0.8
3,346,724	-		CCNA_03186	0.21	+1.8
3,346,746	+		CCNA_03186	0.23	-2.4
3,346,747	-		CCNA_03186	0.23	-0.5
3,346,752	-		CCNA_03186	0.24	+0.8
3,346,754	+		CCNA_03186	0.24	-0.6
3,346,788	-		CCNA_03186	0.27	-0.6
3,346,802	+		CCNA_03186	0.28	-2.8
3,346,802	+		CCNA_03186	0.28	-1.6
3,346,802	+		CCNA_03186	0.28	+0.2
3,346,802	+		CCNA_03186	0.28	-0.2
3,346,802	+		CCNA_03186	0.28	-0.7
3,346,810	-		CCNA_03186	0.29	-0.3
3,346,810	-		CCNA_03186	0.29	+0.0
3,346,810	-		CCNA_03186	0.29	+0.2
3,346,810	-		CCNA_03186	0.29	-0.6
3,346,810	-		CCNA_03186	0.29	-0.5
3,346,810	-		CCNA_03186	0.29	-0.5
3,346,830	-		CCNA_03186	0.31	+0.0
3,346,852	+		CCNA_03186	0.33	-1.1
3,346,855	-		CCNA_03186	0.33	-1.8
3,346,894	+		CCNA_03186	0.36	+0.2
3,346,897	-		CCNA_03186	0.37	+1.2
3,346,911	-		CCNA_03186	0.38	-0.6
3,346,920	-		CCNA_03186	0.39	+0.9
3,346,949	+		CCNA_03186	0.41	-0.1
3,346,950	+		CCNA_03186	0.41	-1.3
3,346,957	-		CCNA_03186	0.42	-0.2
3,346,957	-		CCNA_03186	0.42	-0.2
3,346,964	-		CCNA_03186	0.43	-0.8
3,347,022	+		CCNA_03186	0.48	-2.0
3,347,024	-		CCNA_03186	0.48	-0.5
3,347,032	+		CCNA_03186	0.49	+2.9
3,347,102	-		CCNA_03186	0.55	+0.0
3,347,106	+		CCNA_03186	0.55	-2.0
3,347,114	-		CCNA_03186	0.56	-2.8
3,347,121	+		CCNA_03186	0.57	-0.8
3,347,129	+		CCNA_03186	0.58	-1.9
3,347,220	-		CCNA_03186	0.66	-2.3
3,347,226	+		CCNA_03186	0.66	+2.1
3,347,234	-		CCNA_03186	0.67	-1.9
3,347,239	-		CCNA_03186	0.67	+0.6
3,347,239	-		CCNA_03186	0.67	+0.2
3,347,239	-		CCNA_03186	0.67	+1.6
3,347,239	-		CCNA_03186	0.67	-0.4
3,347,239	-		CCNA_03186	0.67	+1.1
3,347,246	-		CCNA_03186	0.68	-3.3
3,347,268	-		CCNA_03186	0.70	-0.6
3,347,303	+		CCNA_03186	0.73	-2.4
3,347,309	+		CCNA_03186	0.74	-2.1
3,347,311	-		CCNA_03186	0.74	-2.2
3,347,336	-		CCNA_03186	0.76	-1.6
3,347,352	-		CCNA_03186	0.78	-2.4
3,347,353	-		CCNA_03186	0.78	-1.0
3,347,435	+		CCNA_03186	0.85	-2.0
3,347,435	+		CCNA_03186	0.85	-2.2
3,347,458	-		CCNA_03186	0.87	-2.0
3,347,499	+				-2.4
3,347,509	+				-1.2
3,347,517	-				+1.9
3,347,551	+				-0.6
3,347,559	-				-1.8
3,347,675	+				+0.2
3,347,691	+				+0.4
3,347,708	-				+0.1
3,347,712	-				-0.8
3,347,730	+				+1.2
3,347,736	+				+1.2
3,347,744	-		CCNA_03187	0.10	-1.4
3,347,746	+		CCNA_03187	0.10	+0.6
3,347,783	+		CCNA_03187	0.14	-2.2
3,347,879	+		CCNA_03187	0.24	+0.5
3,347,917	+		CCNA_03187	0.28	-0.8
3,347,947	-		CCNA_03187	0.32	-2.1
3,347,955	+		CCNA_03187	0.32	-0.9
3,347,977	-		CCNA_03187	0.35	-2.8
3,347,992	+		CCNA_03187	0.36	-0.0
3,348,014	+		CCNA_03187	0.39	+0.9
3,348,014	+		CCNA_03187	0.39	+0.2
3,348,022	-		CCNA_03187	0.39	-2.3
3,348,040	+		CCNA_03187	0.41	-0.4
3,348,045	+		CCNA_03187	0.42	+0.4
3,348,052	+		CCNA_03187	0.43	+0.5
3,348,067	-		CCNA_03187	0.44	+0.0
3,348,100	+		CCNA_03187	0.48	+0.5
3,348,105	+		CCNA_03187	0.48	-0.8
3,348,105	+		CCNA_03187	0.48	+1.0
3,348,144	-		CCNA_03187	0.52	-1.6
3,348,197	+		CCNA_03187	0.58	+0.3
3,348,218	+		CCNA_03187	0.60	-1.2
3,348,227	+		CCNA_03187	0.61	+0.8
3,348,227	+		CCNA_03187	0.61	+0.6
3,348,235	-		CCNA_03187	0.62	-1.4
3,348,236	-		CCNA_03187	0.62	-1.1
3,348,323	+		CCNA_03187	0.71	-0.2
3,348,323	+		CCNA_03187	0.71	+0.1
3,348,324	+		CCNA_03187	0.71	+0.6
3,348,324	+		CCNA_03187	0.71	+0.1
3,348,324	+		CCNA_03187	0.71	-0.5
3,348,324	+		CCNA_03187	0.71	-0.4
3,348,324	+		CCNA_03187	0.71	+0.2
3,348,324	+		CCNA_03187	0.71	+0.2
3,348,324	+		CCNA_03187	0.71	-0.6
3,348,331	-		CCNA_03187	0.72	+0.5
3,348,332	-		CCNA_03187	0.72	-0.5
3,348,332	-		CCNA_03187	0.72	+0.8
3,348,347	-		CCNA_03187	0.73	+1.5
3,348,355	+		CCNA_03187	0.74	+0.5
3,348,369	+		CCNA_03187	0.76	-0.2
3,348,384	+		CCNA_03187	0.77	+0.2
3,348,384	+		CCNA_03187	0.77	+1.2
3,348,391	-		CCNA_03187	0.78	-1.9
3,348,392	-		CCNA_03187	0.78	+0.1
3,348,392	-		CCNA_03187	0.78	-0.8
3,348,440	+		CCNA_03187	0.83	+0.2
3,348,448	-		CCNA_03187	0.84	-1.4
3,348,458	-		CCNA_03187	0.85	+2.1
3,348,466	+		CCNA_03187	0.86	+0.0
3,348,474	-		CCNA_03187	0.87	-0.3
3,348,474	-		CCNA_03187	0.87	+0.5
3,348,490	-		CCNA_03187	0.88	-0.8
3,348,499	+		CCNA_03187	0.89	+1.5
3,348,563	+				+0.6
3,348,593	+				+1.0
3,348,593	+				+0.2
3,348,601	-				-2.4
3,348,601	-				-1.4
3,348,601	-				-0.2
3,348,601	-				-1.7