Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03151

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
3,305,357	-		CCNA_03149	0.68	-3.5
3,305,400	+		CCNA_03149	0.70	-0.7
3,305,401	+		CCNA_03149	0.70	+0.2
3,305,419	-		CCNA_03149	0.71	-2.5
3,305,419	-		CCNA_03149	0.71	-1.6
3,305,435	+		CCNA_03149	0.71	-0.0
3,305,443	-		CCNA_03149	0.72	-0.9
3,305,461	+		CCNA_03149	0.72	-0.7
3,305,537	-		CCNA_03149	0.76	-1.3
3,305,573	+		CCNA_03149	0.77	-1.3
3,305,625	-		CCNA_03149	0.79	-1.2
3,305,625	-		CCNA_03149	0.79	-2.3
3,305,652	+		CCNA_03149	0.80	-3.0
3,305,652	+		CCNA_03149	0.80	+1.0
3,305,660	-		CCNA_03149	0.81	-0.5
3,305,743	-		CCNA_03149	0.84	+0.1
3,305,769	+		CCNA_03149	0.85	-0.4
3,305,769	+		CCNA_03149	0.85	-0.7
3,305,769	+		CCNA_03149	0.85	-1.4
3,305,769	+		CCNA_03149	0.85	-0.2
3,305,769	+		CCNA_03149	0.85	-1.0
3,305,777	-		CCNA_03149	0.85	-2.5
3,305,777	-		CCNA_03149	0.85	-3.3
3,305,777	-		CCNA_03149	0.85	-1.5
3,305,777	-		CCNA_03149	0.85	+0.5
3,305,811	+		CCNA_03149	0.87	-1.7
3,305,811	+		CCNA_03149	0.87	-1.2
3,305,826	+		CCNA_03149	0.87	-1.5
3,305,834	-		CCNA_03149	0.88	+2.7
3,305,835	+		CCNA_03149	0.88	-0.8
3,305,846	+		CCNA_03149	0.88	+0.2
3,305,864	-		CCNA_03149	0.89	+1.6
3,305,890	+				+0.8
3,305,952	+				-1.1
3,305,952	+				-0.5
3,305,960	-				-2.1
3,305,960	-				+0.8
3,305,965	+				+0.4
3,305,973	-				-0.5
3,306,100	-				-0.3
3,306,187	-		CCNA_03150	0.38	-1.0
3,306,197	-		CCNA_03150	0.45	+0.3
3,306,197	-		CCNA_03150	0.45	+0.5
3,306,197	-		CCNA_03150	0.45	+1.0
3,306,197	-				+1.8
3,306,197	-		CCNA_03150	0.45	+1.2
3,306,197	-		CCNA_03150	0.45	+0.1
3,306,217	-		CCNA_03150	0.57	+1.1
3,306,238	+		CCNA_03150	0.70	-2.2
3,306,349	-				-0.1
3,306,353	+				+0.2
3,306,361	-				+0.7
3,306,361	-				-1.0
3,306,361	-				-0.8
3,306,361	-				-2.2
3,306,362	+				-1.3
3,306,362	+				-0.6
3,306,370	-				+0.4
3,306,370	-				+1.6
3,306,398	-				-0.1
3,306,421	+				-2.6
3,306,429	-				+1.8
3,306,437	-				-2.4
3,306,447	-				-1.7
3,306,467	+				-0.7
3,306,566	+		CCNA_03151	0.14	+2.5
3,306,580	-		CCNA_03151	0.15	-1.4
3,306,608	+		CCNA_03151	0.16	-0.8
3,306,616	-		CCNA_03151	0.17	+0.1
3,306,617	+		CCNA_03151	0.17	+1.0
3,306,674	-		CCNA_03151	0.20	-1.3
3,306,762	-		CCNA_03151	0.24	-1.4
3,306,771	+		CCNA_03151	0.25	+2.8
3,306,771	+		CCNA_03151	0.25	+0.5
3,306,771	+		CCNA_03151	0.25	-0.4
3,306,779	-		CCNA_03151	0.25	-0.7
3,306,797	+		CCNA_03151	0.26	-1.8
3,306,806	+		CCNA_03151	0.26	+1.0
3,306,865	+		CCNA_03151	0.30	-0.9
3,306,889	-		CCNA_03151	0.31	-0.4
3,306,912	-		CCNA_03151	0.32	+0.1
3,306,917	-		CCNA_03151	0.32	-3.0
3,306,943	-		CCNA_03151	0.34	-1.3
3,306,962	+		CCNA_03151	0.35	-1.5
3,306,962	+				+0.2
3,306,962	+		CCNA_03151	0.35	+0.6
3,306,962	+		CCNA_03151	0.35	-0.3
3,306,970	-		CCNA_03151	0.35	+1.2
3,306,970	-		CCNA_03151	0.35	-0.7
3,306,970	-		CCNA_03151	0.35	+0.4
3,306,970	-		CCNA_03151	0.35	-1.3
3,306,997	-		CCNA_03151	0.36	+0.5
3,306,997	-		CCNA_03151	0.36	-0.2
3,307,018	+		CCNA_03151	0.38	+0.1
3,307,026	-		CCNA_03151	0.38	-0.7
3,307,037	-		CCNA_03151	0.39	+1.0
3,307,058	+		CCNA_03151	0.40	+0.6
3,307,066	+		CCNA_03151	0.40	+1.7
3,307,067	+		CCNA_03151	0.40	+2.8
3,307,075	-				+1.2
3,307,075	-		CCNA_03151	0.41	-0.2
3,307,079	+		CCNA_03151	0.41	-0.8
3,307,092	+		CCNA_03151	0.41	+2.1
3,307,150	+		CCNA_03151	0.44	-3.0
3,307,150	+		CCNA_03151	0.44	-2.7
3,307,156	-		CCNA_03151	0.45	-1.1
3,307,168	+		CCNA_03151	0.45	-3.8
3,307,176	-		CCNA_03151	0.46	-0.5
3,307,179	+		CCNA_03151	0.46	-1.5
3,307,217	+		CCNA_03151	0.48	-0.0
3,307,218	+		CCNA_03151	0.48	-0.5
3,307,218	+		CCNA_03151	0.48	-1.0
3,307,225	-		CCNA_03151	0.48	-0.9
3,307,225	-		CCNA_03151	0.48	-2.4
3,307,253	+		CCNA_03151	0.50	-1.2
3,307,306	+		CCNA_03151	0.53	-0.8
3,307,306	+		CCNA_03151	0.53	-1.4
3,307,314	-		CCNA_03151	0.53	-0.9
3,307,319	-		CCNA_03151	0.53	-2.3
3,307,352	+		CCNA_03151	0.55	-2.4
3,307,364	+		CCNA_03151	0.56	-1.7
3,307,364	+		CCNA_03151	0.56	-0.2
3,307,364	+		CCNA_03151	0.56	+0.5
3,307,364	+		CCNA_03151	0.56	+0.2
3,307,381	-		CCNA_03151	0.57	-2.3
3,307,390	+		CCNA_03151	0.57	-0.8
3,307,545	-		CCNA_03151	0.65	-0.7
3,307,545	-		CCNA_03151	0.65	-1.0
3,307,545	-		CCNA_03151	0.65	-2.1
3,307,565	+		CCNA_03151	0.66	+0.6
3,307,580	+		CCNA_03151	0.67	-2.0
3,307,585	+		CCNA_03151	0.67	-1.3
3,307,593	-		CCNA_03151	0.68	-2.1
3,307,603	+		CCNA_03151	0.68	-1.0
3,307,603	+		CCNA_03151	0.68	-2.1
3,307,610	-		CCNA_03151	0.68	-1.8
3,307,624	+		CCNA_03151	0.69	-0.6
3,307,629	+		CCNA_03151	0.69	-1.1
3,307,665	+		CCNA_03151	0.71	-0.5
3,307,676	+		CCNA_03151	0.72	+0.2
3,307,700	-		CCNA_03151	0.73	+1.1
3,307,752	-		CCNA_03151	0.76	-1.2
3,307,767	+		CCNA_03151	0.77	-1.3
3,307,837	+		CCNA_03151	0.80	-0.5
3,307,881	+		CCNA_03151	0.83	+0.1
3,307,889	-		CCNA_03151	0.83	-1.4
3,307,903	+		CCNA_03151	0.84	+1.0
3,307,937	-		CCNA_03151	0.86	+0.4
3,307,970	+		CCNA_03151	0.87	-0.5
3,307,977	+		CCNA_03151	0.88	-0.4
3,307,980	-		CCNA_03151	0.88	-0.8
3,307,990	-		CCNA_03151	0.88	-1.6
3,308,034	+				-1.6
3,308,034	+				+0.9
3,308,034	+				-0.7
3,308,034	+				-0.8
3,308,034	+				-0.1
3,308,034	+				-1.9
3,308,042	-				+1.2
3,308,042	-				+0.5
3,308,042	-				-0.2
3,308,042	-				+2.0
3,308,042	-				+2.2
3,308,042	-				-0.9
3,308,042	-				+0.0
3,308,042	-				-0.2
3,308,042	-				-1.7
3,308,059	+				-0.8
3,308,072	-				-0.0
3,308,096	+				-1.1
3,308,104	-				-0.9
3,308,112	+				+0.3
3,308,148	+				-0.7
3,308,156	-				-2.3
3,308,166	-				+0.2
3,308,188	+				+0.5
3,308,207	-				-2.3
3,308,207	-				-0.0
3,308,214	-				-0.5
3,308,288	+				+1.0
3,308,290	+				-0.5
3,308,310	-				-0.0
3,308,310	-				+0.6
3,308,332	-				+0.1
3,308,353	-				+2.4
3,308,409	-				-0.3
3,308,428	+				-1.4
3,308,428	+				-0.5
3,308,489	+				+0.2
3,308,498	+				+1.9
3,308,516	+				-1.0
3,308,563	+		CCNA_03152	0.12	+0.5
3,308,585	+		CCNA_03152	0.17	+1.0
3,308,586	+		CCNA_03152	0.17	+0.2
3,308,631	-		CCNA_03152	0.28	-1.1
3,308,661	-		CCNA_03152	0.36	-1.2
3,308,675	-		CCNA_03152	0.39	+0.2
3,308,711	+		CCNA_03152	0.48	+1.0
3,308,786	-		CCNA_03152	0.66	+1.1
3,308,794	+		CCNA_03152	0.68	+0.5
3,308,794	+		CCNA_03152	0.68	+0.9
3,308,794	+		CCNA_03152	0.68	+1.9
3,308,794	+		CCNA_03152	0.68	+1.4
3,308,802	-		CCNA_03152	0.70	-0.2
3,308,804	+		CCNA_03152	0.70	-0.1
3,308,804	+		CCNA_03152	0.70	+1.4
3,308,808	+		CCNA_03152	0.71	+1.1
3,308,808	+		CCNA_03152	0.71	+1.5
3,308,808	+		CCNA_03152	0.71	+1.3
3,308,818	+		CCNA_03152	0.73	+1.3
3,308,818	+		CCNA_03152	0.73	+1.7
3,308,818	+		CCNA_03152	0.73	+1.3
3,308,826	-		CCNA_03152	0.75	-0.4
3,308,826	-		CCNA_03152	0.75	-0.8
3,308,826	-		CCNA_03152	0.75	-0.9
3,308,828	+		CCNA_03152	0.76	+1.1
3,308,828	+		CCNA_03152	0.76	+2.2
3,308,859	-		CCNA_03152	0.83	-0.4
3,308,904	-				-1.0
3,308,922	+				-0.3
3,308,922	+				+0.8
3,308,963	-				+0.5
3,308,988	+				-1.1
3,308,990	+				+0.3
3,308,990	+				+0.2
3,308,990	+				+0.4
3,309,044	+		CCNA_03153	0.17	+0.6
3,309,104	+		CCNA_03153	0.25	-0.8
3,309,112	-		CCNA_03153	0.26	-0.8
3,309,160	-		CCNA_03153	0.33	-1.6
3,309,194	-		CCNA_03153	0.38	+0.9
3,309,199	-		CCNA_03153	0.39	-0.9
3,309,201	+		CCNA_03153	0.39	+0.4
3,309,204	-		CCNA_03153	0.39	+0.5