Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01579

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
1,694,309	-		CCNA_01577	0.83	-0.3
1,694,311	+		CCNA_01577	0.83	+0.3
1,694,336	-		CCNA_01577	0.86	+1.7
1,694,495	-				-1.4
1,694,578	+				-2.2
1,694,578	+				+1.3
1,694,610	-				-0.7
1,694,684	+				+0.5
1,694,705	+				+0.0
1,694,722	+		CCNA_01578	0.12	-0.7
1,694,731	+		CCNA_01578	0.14	-2.3
1,694,731	+		CCNA_01578	0.14	-0.3
1,694,772	+		CCNA_01578	0.26	+0.0
1,694,772	+		CCNA_01578	0.26	+0.6
1,694,794	+		CCNA_01578	0.32	-1.0
1,694,807	+		CCNA_01578	0.35	-0.2
1,694,815	-		CCNA_01578	0.37	-0.8
1,694,866	+		CCNA_01578	0.52	-0.5
1,694,893	+		CCNA_01578	0.59	+0.8
1,694,893	+		CCNA_01578	0.59	+0.2
1,694,898	+		CCNA_01578	0.60	-0.6
1,694,909	+		CCNA_01578	0.63	+1.3
1,694,919	+		CCNA_01578	0.66	-0.4
1,694,919	+		CCNA_01578	0.66	-0.1
1,694,919	+		CCNA_01578	0.66	-0.7
1,694,919	+		CCNA_01578	0.66	+1.9
1,694,975	+		CCNA_01578	0.82	+0.9
1,695,087	+				+2.2
1,695,087	-				-1.5
1,695,090	-				-0.5
1,695,120	-				+0.1
1,695,152	+				+2.1
1,695,152	+				-0.1
1,695,160	+				+0.7
1,695,160	-				-1.4
1,695,161	-				-0.3
1,695,161	-				-1.1
1,695,207	+				+2.0
1,695,207	+				+2.0
1,695,252	+				+1.9
1,695,252	+				+1.2
1,695,252	+				+1.0
1,695,252	+				+2.3
1,695,259	-				+0.7
1,695,260	-				-0.6
1,695,260	-				-0.3
1,695,260	-				-0.3
1,695,260	-				-0.8
1,695,293	+				+2.6
1,695,311	+				+0.3
1,695,343	+				+1.3
1,695,380	+				+2.1
1,695,382	-				-0.1
1,695,422	-				-1.4
1,695,422	-				-1.1
1,695,422	-				+1.9
1,695,447	+				+1.6
1,695,474	+		CCNA_01579	0.11	+1.5
1,695,479	+		CCNA_01579	0.12	+0.1
1,695,479	+		CCNA_01579	0.12	+1.3
1,695,487	-		CCNA_01579	0.12	-0.2
1,695,492	-		CCNA_01579	0.13	-2.6
1,695,494	+		CCNA_01579	0.13	+0.6
1,695,494	+		CCNA_01579	0.13	+1.7
1,695,494	+		CCNA_01579	0.13	+1.0
1,695,494	+		CCNA_01579	0.13	+1.7
1,695,502	-		CCNA_01579	0.13	-1.7
1,695,513	+		CCNA_01579	0.14	+1.3
1,695,513	+		CCNA_01579	0.14	+1.5
1,695,521	-		CCNA_01579	0.14	-1.0
1,695,521	-		CCNA_01579	0.14	-1.0
1,695,527	-		CCNA_01579	0.15	-0.3
1,695,546	-		CCNA_01579	0.16	-0.4
1,695,581	+		CCNA_01579	0.18	+0.1
1,695,581	+		CCNA_01579	0.18	+1.0
1,695,634	+		CCNA_01579	0.22	+2.5
1,695,634	+		CCNA_01579	0.22	+1.0
1,695,634	+		CCNA_01579	0.22	+1.7
1,695,634	+		CCNA_01579	0.22	+1.1
1,695,637	-		CCNA_01579	0.22	+0.1
1,695,639	+		CCNA_01579	0.22	+0.9
1,695,639	+		CCNA_01579	0.22	+1.8
1,695,640	+		CCNA_01579	0.22	+1.7
1,695,642	-		CCNA_01579	0.22	+0.4
1,695,642	-		CCNA_01579	0.22	+1.4
1,695,642	-		CCNA_01579	0.22	+0.5
1,695,642	-		CCNA_01579	0.22	-0.3
1,695,644	+		CCNA_01579	0.23	+1.4
1,695,647	-		CCNA_01579	0.23	+0.1
1,695,756	+		CCNA_01579	0.30	+2.2
1,695,777	+		CCNA_01579	0.31	+2.0
1,695,795	-		CCNA_01579	0.33	-0.7
1,695,797	+		CCNA_01579	0.33	+1.7
1,695,797	+		CCNA_01579	0.33	+2.3
1,695,809	+		CCNA_01579	0.34	+2.4
1,695,819	-		CCNA_01579	0.34	-3.2
1,695,828	+		CCNA_01579	0.35	+4.1
1,695,836	-		CCNA_01579	0.35	+1.5
1,695,836	-		CCNA_01579	0.35	+1.5
1,695,894	-		CCNA_01579	0.39	+0.5
1,695,904	-		CCNA_01579	0.40	+0.1
1,695,948	+		CCNA_01579	0.43	+0.8
1,695,961	-		CCNA_01579	0.44	-0.5
1,695,996	+		CCNA_01579	0.46	+2.3
1,695,996	+		CCNA_01579	0.46	+0.6
1,695,996	+		CCNA_01579	0.46	+0.4
1,695,996	+		CCNA_01579	0.46	+1.2
1,695,996	+		CCNA_01579	0.46	+0.0
1,695,996	+		CCNA_01579	0.46	+1.5
1,695,996	+		CCNA_01579	0.46	+1.6
1,695,996	+		CCNA_01579	0.46	+1.3
1,695,996	+		CCNA_01579	0.46	+2.4
1,695,997	+		CCNA_01579	0.46	+3.4
1,696,001	+		CCNA_01579	0.46	-0.2
1,696,001	+		CCNA_01579	0.46	+0.8
1,696,001	+		CCNA_01579	0.46	+0.7
1,696,001	+		CCNA_01579	0.46	+1.4
1,696,001	+		CCNA_01579	0.46	+1.4
1,696,001	+		CCNA_01579	0.46	+1.4
1,696,004	-		CCNA_01579	0.46	+2.3
1,696,009	-		CCNA_01579	0.47	+1.1
1,696,020	+		CCNA_01579	0.48	+0.7
1,696,044	-		CCNA_01579	0.49	+1.3
1,696,077	+		CCNA_01579	0.51	+0.3
1,696,077	+		CCNA_01579	0.51	+1.1
1,696,077	+		CCNA_01579	0.51	+1.9
1,696,082	+		CCNA_01579	0.52	+2.4
1,696,085	-		CCNA_01579	0.52	-0.4
1,696,085	-		CCNA_01579	0.52	-1.1
1,696,085	-		CCNA_01579	0.52	+0.9
1,696,107	+		CCNA_01579	0.53	+1.7
1,696,153	-		CCNA_01579	0.56	+0.3
1,696,154	-		CCNA_01579	0.56	+0.1
1,696,237	+		CCNA_01579	0.62	+2.6
1,696,242	+		CCNA_01579	0.62	+2.1
1,696,319	-		CCNA_01579	0.67	-0.9
1,696,346	+		CCNA_01579	0.69	+1.5
1,696,346	+		CCNA_01579	0.69	+1.4
1,696,364	+		CCNA_01579	0.70	+1.9
1,696,417	-		CCNA_01579	0.74	-0.8
1,696,444	-		CCNA_01579	0.76	-1.2
1,696,498	+		CCNA_01579	0.79	+1.0
1,696,506	-		CCNA_01579	0.80	-2.1
1,696,512	-		CCNA_01579	0.80	-2.4
1,696,576	+		CCNA_01579	0.84	+0.7
1,696,595	+		CCNA_01579	0.86	+1.9
1,696,675	+				+0.8
1,696,675	+				+0.8
1,696,675	+				+1.3
1,696,679	-				-0.9
1,696,712	+				+1.6
1,696,712	+				+1.2
1,696,720	-				-1.9
1,696,770	+				+1.4
1,696,837	+				+0.1
1,696,837	+				+2.3
1,696,837	+				+2.0
1,696,837	+				+0.5
1,696,849	+				+2.1
1,696,990	+		CCNA_01580	0.16	+0.1
1,696,995	-		CCNA_01580	0.17	+0.1
1,696,997	+		CCNA_01580	0.18	-0.4
1,697,053	-		CCNA_01580	0.26	-0.7
1,697,065	+		CCNA_01580	0.28	-0.3
1,697,091	+		CCNA_01580	0.32	+0.7
1,697,091	+		CCNA_01580	0.32	+1.7
1,697,091	+		CCNA_01580	0.32	+0.0
1,697,094	-		CCNA_01580	0.32	+0.9
1,697,098	+		CCNA_01580	0.33	-0.8
1,697,099	-		CCNA_01580	0.33	-1.5
1,697,147	-		CCNA_01580	0.41	-1.5
1,697,159	+		CCNA_01580	0.42	+1.8
1,697,182	+		CCNA_01580	0.46	+0.7
1,697,182	+		CCNA_01580	0.46	-1.4
1,697,216	+		CCNA_01580	0.51	+0.9
1,697,238	+		CCNA_01580	0.55	+0.0
1,697,246	-		CCNA_01580	0.56	-1.6
1,697,246	-		CCNA_01580	0.56	-1.2
1,697,246	-		CCNA_01580	0.56	+0.5
1,697,270	+		CCNA_01580	0.59	+1.2
1,697,277	+		CCNA_01580	0.61	-0.3
1,697,278	-		CCNA_01580	0.61	+1.3
1,697,278	-		CCNA_01580	0.61	+0.1
1,697,545	+				+1.8
1,697,584	+				+1.7
1,697,612	-				+2.7
1,697,634	+				+1.5
1,697,634	+				+1.9
1,697,644	-				-1.3
1,697,644	-				-0.8
1,697,651	+				+1.2
1,697,669	+				-0.5
1,697,760	+		CCNA_01581	0.35	+2.5
1,697,773	-		CCNA_01581	0.39	+0.1