Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01465

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
1,571,607	+		CCNA_01463	0.85	+0.1
1,571,681	-				-0.5
1,571,686	-				-0.1
1,571,692	+				+0.5
1,571,717	+				-0.5
1,571,878	-				+2.4
1,571,883	-		CCNA_03951	0.13	+2.7
1,571,888	-		CCNA_03951	0.19	+2.5
1,571,934	-		CCNA_03951	0.74	+2.7
1,571,966	-				+2.5
1,572,032	+				-0.9
1,572,032	-				+2.2
1,572,039	+				-2.3
1,572,047	-				+0.9
1,572,053	+				-1.0
1,572,066	-				+1.0
1,572,072	-				+1.3
1,572,077	-				+2.9
1,572,080	+				-1.2
1,572,087	+				-0.1
1,572,093	-				+1.4
1,572,095	-				+1.0
1,572,097	+				-0.1
1,572,100	-		CCNA_01464	0.11	+1.4
1,572,100	-		CCNA_01464	0.11	-0.5
1,572,126	+		CCNA_01464	0.19	-0.4
1,572,127	+		CCNA_01464	0.19	+0.6
1,572,162	+		CCNA_01464	0.30	-0.1
1,572,169	-		CCNA_01464	0.32	+1.0
1,572,193	+		CCNA_01464	0.40	-1.0
1,572,201	-		CCNA_01464	0.42	-1.0
1,572,211	-		CCNA_01464	0.46	+0.8
1,572,211	-		CCNA_01464	0.46	+2.2
1,572,211	-		CCNA_01464	0.46	+0.2
1,572,214	+		CCNA_01464	0.47	-2.6
1,572,214	+		CCNA_01464	0.47	+1.4
1,572,216	-		CCNA_01464	0.47	+2.8
1,572,222	-		CCNA_01464	0.49	+1.4
1,572,222	-		CCNA_01464	0.49	+1.1
1,572,222	-		CCNA_01464	0.49	+1.1
1,572,222	-		CCNA_01464	0.49	+0.2
1,572,227	-		CCNA_01464	0.51	+1.1
1,572,227	-		CCNA_01464	0.51	-0.1
1,572,250	-		CCNA_01464	0.58	+0.9
1,572,364	-				+0.1
1,572,382	+				-1.4
1,572,388	-				-1.4
1,572,417	-				+0.6
1,572,417	-				-1.7
1,572,424	+				-1.2
1,572,448	-				-0.9
1,572,475	-				-0.7
1,572,478	+				+0.9
1,572,486	-				+0.3
1,572,486	-				-1.3
1,572,486	-				+0.9
1,572,503	-				-0.6
1,572,506	+				-0.2
1,572,509	-				-1.0
1,572,514	-				+0.9
1,572,514	-				-1.8
1,572,623	+				+1.1
1,572,693	+				+2.6
1,572,698	+				+1.3
1,572,703	+				+2.3
1,572,703	+				+1.8
1,572,713	+				+1.5
1,572,758	-				-1.3
1,572,761	+				+1.1
1,572,782	-		CCNA_01465	0.11	-1.3
1,572,812	+		CCNA_01465	0.13	-0.7
1,572,820	+		CCNA_01465	0.13	+2.0
1,572,830	+		CCNA_01465	0.14	+2.2
1,572,830	+		CCNA_01465	0.14	+2.2
1,572,833	-		CCNA_01465	0.14	+1.9
1,572,848	+		CCNA_01465	0.15	+0.6
1,572,856	-		CCNA_01465	0.16	-0.9
1,572,881	-		CCNA_01465	0.17	-1.5
1,572,897	+		CCNA_01465	0.18	+0.7
1,573,006	-		CCNA_01465	0.25	-0.1
1,573,073	-		CCNA_01465	0.29	-0.4
1,573,115	+		CCNA_01465	0.32	+1.5
1,573,115	+		CCNA_01465	0.32	+0.7
1,573,115	+		CCNA_01465	0.32	+1.4
1,573,115	+		CCNA_01465	0.32	+1.3
1,573,115	+		CCNA_01465	0.32	+1.2
1,573,125	+		CCNA_01465	0.33	+0.8
1,573,125	-		CCNA_01465	0.33	-0.8
1,573,158	+		CCNA_01465	0.35	-0.9
1,573,166	+		CCNA_01465	0.35	+1.1
1,573,174	-				+0.9
1,573,188	+		CCNA_01465	0.36	-1.0
1,573,198	+		CCNA_01465	0.37	+1.6
1,573,225	-		CCNA_01465	0.39	-0.3
1,573,354	+		CCNA_01465	0.47	+1.1
1,573,413	+		CCNA_01465	0.51	+1.3
1,573,432	+		CCNA_01465	0.52	+0.7
1,573,438	-		CCNA_01465	0.52	-0.5
1,573,444	-		CCNA_01465	0.53	+0.9
1,573,450	-				+3.7
1,573,479	-		CCNA_01465	0.55	+0.2
1,573,512	+		CCNA_01465	0.57	+1.9
1,573,512	+		CCNA_01465	0.57	+0.9
1,573,512	+		CCNA_01465	0.57	+0.0
1,573,513	+		CCNA_01465	0.57	-0.3
1,573,541	-		CCNA_01465	0.59	+0.2
1,573,621	-		CCNA_01465	0.64	+0.4
1,573,636	-		CCNA_01465	0.65	-2.0
1,573,658	+		CCNA_01465	0.66	+1.8
1,573,686	+		CCNA_01465	0.68	+2.9
1,573,689	-		CCNA_01465	0.68	-0.5
1,573,689	-		CCNA_01465	0.68	-0.1
1,573,754	+		CCNA_01465	0.72	+1.4
1,573,818	-		CCNA_01465	0.76	-0.3
1,573,825	+		CCNA_01465	0.76	-2.0
1,573,843	-		CCNA_01465	0.78	-0.9
1,573,859	+		CCNA_01465	0.79	-0.8
1,573,867	-		CCNA_01465	0.79	+1.4
1,573,887	+		CCNA_01465	0.80	+1.8
1,573,887	+		CCNA_01465	0.80	+0.0
1,573,892	+		CCNA_01465	0.81	+0.9
1,573,904	+		CCNA_01465	0.81	+0.3
1,573,932	+		CCNA_01465	0.83	+0.1
1,573,932	+		CCNA_01465	0.83	+1.1
1,573,940	+		CCNA_01465	0.84	+1.6
1,573,940	-		CCNA_01465	0.84	-1.0
1,573,940	-		CCNA_01465	0.84	-0.9
1,573,984	-		CCNA_01465	0.86	-2.1
1,573,987	-		CCNA_01465	0.87	+0.2
1,574,028	+		CCNA_01465	0.89	+0.6
1,574,028	+		CCNA_01465	0.89	+1.0
1,574,028	+				+0.9
1,574,059	-				-1.3
1,574,061	+				+2.2
1,574,061	+				+1.0
1,574,069	-				-0.3
1,574,074	-				-0.2
1,574,143	+				+0.3
1,574,153	+				-1.8
1,574,186	+				+0.1
1,574,243	+				-0.3
1,574,243	+				+0.8
1,574,243	+				-0.2
1,574,243	+				+0.3
1,574,243	+				-1.6
1,574,251	-				+0.6
1,574,251	-				-1.5
1,574,322	-				+0.2
1,574,338	+				+1.3
1,574,368	-		CCNA_01466	0.17	-1.5
1,574,421	+		CCNA_01466	0.37	-1.1
1,574,426	+		CCNA_01466	0.39	-1.6
1,574,447	+				+1.9
1,574,460	-		CCNA_01466	0.51	-2.1
1,574,462	+		CCNA_01466	0.52	-0.3
1,574,465	+		CCNA_01466	0.53	+0.3
1,574,465	-		CCNA_01466	0.53	+1.1
1,574,473	-		CCNA_01466	0.56	-0.9
1,574,478	-		CCNA_01466	0.58	+0.4
1,574,498	+		CCNA_01466	0.66	-1.3
1,574,506	-		CCNA_01466	0.69	-1.3
1,574,514	-		CCNA_01466	0.72	-0.3
1,574,522	-		CCNA_01466	0.75	-0.3
1,574,535	+		CCNA_01466	0.79	-1.0
1,574,538	-		CCNA_01466	0.81	-1.2
1,574,555	-		CCNA_01466	0.87	-0.0
1,574,558	-		CCNA_01466	0.88	+1.1
1,574,598	+				+1.3
1,574,605	+				-1.4
1,574,605	+				+0.2
1,574,613	-				+0.1
1,574,614	+				-1.6
1,574,639	+				-0.4
1,574,647	-				+0.2
1,574,647	-				-0.3
1,574,647	-				-0.5
1,574,658	-				-0.7
1,574,694	-				-2.3
1,574,706	+				+0.1
1,574,714	-				+1.4
1,574,801	+				+1.9
1,574,801	+				-0.4
1,574,806	+				-0.5
1,574,806	+				+0.9
1,574,809	-				-1.6
1,574,843	+				-1.5
1,574,851	+				-0.3
1,574,851	+				-0.4
1,574,851	-				-0.7
1,574,859	-				-1.8
1,574,886	-		CCNA_01467	0.11	-1.4
1,574,975	+		CCNA_01467	0.16	-0.9
1,574,975	+		CCNA_01467	0.16	+0.2
1,574,975	+		CCNA_01467	0.16	+0.0
1,574,975	+		CCNA_01467	0.16	+0.2
1,574,975	+		CCNA_01467	0.16	-0.1
1,574,979	-		CCNA_01467	0.16	-0.9
1,574,983	-				+0.3
1,575,026	+		CCNA_01467	0.19	+3.1
1,575,054	+		CCNA_01467	0.21	+2.1
1,575,062	-		CCNA_01467	0.21	+0.1
1,575,105	-		CCNA_01467	0.24	-1.1
1,575,146	+		CCNA_01467	0.26	-1.6
1,575,146	+		CCNA_01467	0.26	+0.3
1,575,146	+		CCNA_01467	0.26	+0.7
1,575,154	-		CCNA_01467	0.27	+0.5