Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32240
Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.032 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,801,916 | + | BPHYT_RS32235 | 0.80 | -1.5 | |
| 2,801,966 | - | BPHYT_RS32235 | 0.84 | -1.2 | |
| 2,801,990 | + | BPHYT_RS32235 | 0.86 | +0.3 | |
| 2,802,063 | - | -0.3 | |||
| 2,803,089 | - | BPHYT_RS32240 | 0.26 | +0.0 | |
| 2,803,257 | - | BPHYT_RS32240 | 0.45 | -2.5 | |
| 2,803,660 | + | +0.2 | |||
| 2,803,669 | - | +0.4 | |||
| 2,803,875 | - | +0.4 | |||
| 2,803,875 | - | +0.3 | |||
| 2,803,875 | - | +0.7 | |||
| 2,803,910 | - | -0.5 | |||
| 2,803,931 | - | +0.1 | |||
| 2,804,319 | - | +0.4 | |||
| 2,804,620 | - | +0.1 |
Or see this region's nucleotide sequence