Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS29050 and BPHYT_RS29055 are separated by 45 nucleotides BPHYT_RS29055 and BPHYT_RS29060 are separated by 114 nucleotides BPHYT_RS29060 and BPHYT_RS29065 are separated by 364 nucleotides
BPHYT_RS29050: BPHYT_RS29050 - polyisoprenoid-binding protein, at 2,073,544 to 2,074,119
_RS29050
BPHYT_RS29055: BPHYT_RS29055 - polyisoprenoid-binding protein, at 2,074,165 to 2,074,743
_RS29055
BPHYT_RS29060: BPHYT_RS29060 - hypothetical protein, at 2,074,858 to 2,075,841
_RS29060
BPHYT_RS29065: BPHYT_RS29065 - hypothetical protein, at 2,076,206 to 2,076,877
_RS29065
Position (kb)
2074
2075
2076 Strain fitness (log2 ratio)
-2
-1
0
1 at 2074.117 kb on + strand at 2074.688 kb on - strand at 2074.741 kb on + strand at 2074.902 kb on - strand at 2074.902 kb on - strand at 2074.902 kb on - strand at 2075.147 kb on + strand, within BPHYT_RS29060 at 2075.631 kb on + strand, within BPHYT_RS29060 at 2075.633 kb on + strand, within BPHYT_RS29060 at 2075.682 kb on - strand, within BPHYT_RS29060 at 2076.303 kb on - strand, within BPHYT_RS29065 at 2076.572 kb on + strand, within BPHYT_RS29065 at 2076.651 kb on - strand, within BPHYT_RS29065 at 2076.830 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/ml remove 2,074,117 + +0.3 2,074,688 - -0.4 2,074,741 + -0.0 2,074,902 - +0.3 2,074,902 - +1.4 2,074,902 - +0.1 2,075,147 + BPHYT_RS29060 0.29 -0.5 2,075,631 + BPHYT_RS29060 0.79 -1.6 2,075,633 + BPHYT_RS29060 0.79 +0.9 2,075,682 - BPHYT_RS29060 0.84 +0.0 2,076,303 - BPHYT_RS29065 0.14 +0.2 2,076,572 + BPHYT_RS29065 0.54 +0.1 2,076,651 - BPHYT_RS29065 0.66 -2.5 2,076,830 + +0.2
Or see this region's nucleotide sequence