Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25335
Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,258,642 | + | -0.2 | |||
1,258,710 | - | -0.9 | |||
1,258,715 | - | +0.7 | |||
1,258,810 | - | -1.3 | |||
1,258,888 | + | +0.0 | |||
1,258,897 | - | +0.7 | |||
1,258,934 | - | BPHYT_RS25335 | 0.17 | -1.3 | |
1,259,428 | - | +0.1 | |||
1,259,592 | + | BPHYT_RS25340 | 0.24 | -0.8 | |
1,259,634 | + | BPHYT_RS25340 | 0.28 | +0.1 | |
1,259,896 | - | BPHYT_RS25340 | 0.51 | +0.8 |
Or see this region's nucleotide sequence