Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS22500
Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.032 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 605,484 | + | BPHYT_RS22490 | 0.80 | -1.2 | |
| 605,485 | - | BPHYT_RS22490 | 0.80 | +0.6 | |
| 605,603 | - | +0.4 | |||
| 606,392 | - | -0.8 | |||
| 606,629 | - | BPHYT_RS22500 | 0.16 | -1.3 | |
| 606,655 | - | BPHYT_RS22500 | 0.19 | -0.5 | |
| 606,897 | + | BPHYT_RS22500 | 0.43 | -0.0 | |
| 606,898 | - | BPHYT_RS22500 | 0.43 | -3.3 | |
| 607,787 | - | BPHYT_RS22505 | 0.15 | -0.1 | |
| 607,884 | - | BPHYT_RS22505 | 0.27 | -0.2 | |
| 608,255 | - | BPHYT_RS22505 | 0.69 | +0.8 | |
| 608,361 | - | +1.3 |
Or see this region's nucleotide sequence