Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS22355
Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.032 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 570,964 | - | +1.9 | |||
| 571,054 | + | +0.0 | |||
| 571,143 | - | +0.0 | |||
| 571,143 | - | +0.2 | |||
| 571,493 | + | -1.9 | |||
| 571,494 | - | +0.4 | |||
| 571,536 | + | -1.0 | |||
| 571,568 | + | +0.7 | |||
| 571,922 | - | -0.2 | |||
| 572,196 | - | BPHYT_RS22355 | 0.36 | -1.5 | |
| 572,382 | - | BPHYT_RS22355 | 0.63 | +0.5 | |
| 572,627 | + | +0.4 | |||
| 572,720 | + | -1.1 | |||
| 572,723 | + | -0.0 | |||
| 572,724 | - | -0.9 | |||
| 572,724 | - | -0.3 | |||
| 572,726 | - | -1.8 | |||
| 572,796 | - | -2.0 | |||
| 572,828 | + | +0.3 | |||
| 572,829 | - | -0.9 | |||
| 572,872 | + | +0.1 | |||
| 572,982 | - | -0.1 | |||
| 573,052 | - | +0.7 | |||
| 573,541 | - | BPHYT_RS22360 | 0.58 | -1.0 | |
| 573,541 | - | BPHYT_RS22360 | 0.58 | -1.2 |
Or see this region's nucleotide sequence