Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS21345 and BPHYT_RS21350 are separated by 27 nucleotides BPHYT_RS21350 and BPHYT_RS21355 are separated by 225 nucleotides
BPHYT_RS21345: BPHYT_RS21345 - membrane protein, at 347,247 to 348,266
_RS21345
BPHYT_RS21350: BPHYT_RS21350 - ADP-glucose pyrophosphorylase, at 348,294 to 349,058
_RS21350
BPHYT_RS21355: BPHYT_RS21355 - major facilitator transporter, at 349,284 to 350,687
_RS21355
Position (kb) 348
349
350 Strain fitness (log2 ratio) -2
-1
0
1
2 at 348.282 kb on - strand at 348.865 kb on - strand, within BPHYT_RS21350 at 348.929 kb on + strand, within BPHYT_RS21350 at 349.238 kb on + strand at 349.440 kb on + strand, within BPHYT_RS21355 at 349.440 kb on + strand, within BPHYT_RS21355 at 349.441 kb on - strand, within BPHYT_RS21355 at 349.441 kb on - strand, within BPHYT_RS21355 at 349.441 kb on - strand, within BPHYT_RS21355 at 349.441 kb on - strand, within BPHYT_RS21355 at 349.693 kb on - strand, within BPHYT_RS21355 at 349.714 kb on + strand, within BPHYT_RS21355 at 349.715 kb on - strand, within BPHYT_RS21355 at 349.758 kb on + strand, within BPHYT_RS21355 at 349.758 kb on + strand, within BPHYT_RS21355 at 349.758 kb on + strand, within BPHYT_RS21355 at 349.758 kb on + strand, within BPHYT_RS21355 at 349.759 kb on - strand, within BPHYT_RS21355 at 349.759 kb on - strand, within BPHYT_RS21355 at 349.759 kb on - strand, within BPHYT_RS21355 at 349.759 kb on - strand, within BPHYT_RS21355 at 349.759 kb on - strand at 349.759 kb on - strand, within BPHYT_RS21355 at 349.988 kb on - strand, within BPHYT_RS21355 at 350.013 kb on + strand, within BPHYT_RS21355
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/ml remove 348,282 - -0.4 348,865 - BPHYT_RS21350 0.75 -2.1 348,929 + BPHYT_RS21350 0.83 -0.4 349,238 + -0.6 349,440 + BPHYT_RS21355 0.11 -0.7 349,440 + BPHYT_RS21355 0.11 -1.1 349,441 - BPHYT_RS21355 0.11 -0.7 349,441 - BPHYT_RS21355 0.11 +1.3 349,441 - BPHYT_RS21355 0.11 -0.5 349,441 - BPHYT_RS21355 0.11 -0.1 349,693 - BPHYT_RS21355 0.29 -0.2 349,714 + BPHYT_RS21355 0.31 -0.1 349,715 - BPHYT_RS21355 0.31 +1.0 349,758 + BPHYT_RS21355 0.34 -0.1 349,758 + BPHYT_RS21355 0.34 +0.5 349,758 + BPHYT_RS21355 0.34 -0.5 349,758 + BPHYT_RS21355 0.34 -0.4 349,759 - BPHYT_RS21355 0.34 +2.6 349,759 - BPHYT_RS21355 0.34 -0.4 349,759 - BPHYT_RS21355 0.34 -0.4 349,759 - BPHYT_RS21355 0.34 -1.1 349,759 - -0.0 349,759 - BPHYT_RS21355 0.34 -0.1 349,988 - BPHYT_RS21355 0.50 +0.2 350,013 + BPHYT_RS21355 0.52 +1.3
Or see this region's nucleotide sequence