Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16285

Experiment: Paraquat dichloride 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.032 mg/ml
3,696,421	-		BPHYT_RS16280	0.33	+0.2
3,696,503	+		BPHYT_RS16280	0.44	+0.9
3,696,504	-		BPHYT_RS16280	0.44	-0.6
3,696,506	+		BPHYT_RS16280	0.45	+0.9
3,696,506	+		BPHYT_RS16280	0.45	+0.2
3,696,507	-		BPHYT_RS16280	0.45	+0.3
3,696,507	-		BPHYT_RS16280	0.45	+0.7
3,696,507	-		BPHYT_RS16280	0.45	+0.1
3,696,507	-		BPHYT_RS16280	0.45	-0.5
3,696,507	-		BPHYT_RS16280	0.45	+0.1
3,696,507	-		BPHYT_RS16280	0.45	-0.1
3,696,527	+		BPHYT_RS16280	0.48	-0.3
3,696,527	+		BPHYT_RS16280	0.48	-0.5
3,696,527	+		BPHYT_RS16280	0.48	-1.0
3,696,563	+		BPHYT_RS16280	0.52	+0.9
3,696,564	-		BPHYT_RS16280	0.52	-2.1
3,696,564	-		BPHYT_RS16280	0.52	+0.5
3,696,564	-		BPHYT_RS16280	0.52	-1.8
3,696,564	-		BPHYT_RS16280	0.52	+0.0
3,696,618	-		BPHYT_RS16280	0.60	+0.0
3,696,663	+		BPHYT_RS16280	0.66	+0.1
3,696,753	-		BPHYT_RS16280	0.78	+0.8
3,696,897	+				+0.3
3,696,897	+				+0.4
3,696,898	-				-2.4
3,696,898	-				+0.6
3,697,009	+				+0.5
3,697,009	+				-0.2
3,697,010	-				-1.8
3,697,026	-				-0.8
3,697,027	+				+0.0
3,697,028	-				+0.0
3,697,074	+				+0.1
3,697,093	-				+1.1
3,697,094	+				+0.2
3,697,103	+				-0.3
3,697,103	+				-0.0
3,697,103	+				-0.4
3,697,107	+				-0.4
3,697,107	+				-0.2
3,697,107	+				+0.2
3,697,113	+				-0.2
3,697,138	+				-0.2
3,697,138	+				-0.1
3,697,430	+		BPHYT_RS16285	0.31	+1.2
3,697,430	+		BPHYT_RS16285	0.31	+1.6
3,697,431	-		BPHYT_RS16285	0.32	+1.6
3,697,529	+		BPHYT_RS16285	0.42	-0.4
3,697,529	+		BPHYT_RS16285	0.42	+0.1
3,697,880	+		BPHYT_RS16285	0.80	+0.9
3,697,880	+		BPHYT_RS16285	0.80	-0.2
3,698,108	+				-0.4
3,698,108	+				+0.2
3,698,281	+				+0.5
3,698,281	+		BPHYT_RS16290	0.80	-1.8
3,698,387	+				-0.5
3,698,416	+				-0.5
3,698,444	+				+0.5