Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13815
Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.032 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,150,106 | + | +0.0 | |||
| 3,150,111 | - | +0.8 | |||
| 3,150,137 | + | -0.3 | |||
| 3,150,225 | + | -0.6 | |||
| 3,150,225 | + | +0.5 | |||
| 3,150,225 | + | -0.5 | |||
| 3,150,459 | + | +0.5 | |||
| 3,150,753 | + | +0.1 | |||
| 3,150,754 | - | -1.9 | |||
| 3,150,867 | - | BPHYT_RS13815 | 0.29 | -0.9 | |
| 3,150,924 | - | BPHYT_RS13815 | 0.52 | -1.1 | |
| 3,150,953 | - | BPHYT_RS13815 | 0.64 | -0.9 | |
| 3,150,953 | - | BPHYT_RS13815 | 0.64 | -1.6 | |
| 3,151,037 | + | -0.1 | |||
| 3,151,038 | - | +1.3 | |||
| 3,151,225 | - | +1.2 | |||
| 3,151,515 | - | BPHYT_RS13820 | 0.25 | +0.4 |
Or see this region's nucleotide sequence