Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12295

Experiment: Paraquat dichloride 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.032 mg/ml
2,807,494	+				-1.5
2,807,494	+				-0.1
2,807,494	+				-1.1
2,807,495	-				-0.4
2,807,504	-				-0.1
2,807,715	+				+0.1
2,807,737	+				+1.9
2,807,738	-				-0.2
2,807,738	-				-0.2
2,807,738	-				-0.2
2,807,859	+		BPHYT_RS12290	0.35	-0.3
2,808,012	+		BPHYT_RS12290	0.70	+0.1
2,808,223	+				-0.0
2,808,224	-				+1.3
2,808,335	+				-0.3
2,808,335	+				+0.5
2,808,350	+				+0.1
2,808,350	+				+0.0
2,808,350	+				+0.6
2,808,354	+				-0.5
2,808,354	+				+0.0
2,808,354	+				-2.0
2,808,355	-				+0.8
2,808,355	-				-0.0
2,808,355	-				+0.1
2,808,355	-				-0.3
2,808,355	-				-2.6
2,808,640	-		BPHYT_RS12295	0.35	+0.4
2,809,278	+				-1.2
2,809,339	+				-1.2
2,809,532	+		BPHYT_RS12300	0.19	+0.7
2,809,533	-		BPHYT_RS12300	0.19	+0.4
2,809,533	-		BPHYT_RS12300	0.19	-0.0
2,809,533	-		BPHYT_RS12300	0.19	+0.1
2,809,685	+		BPHYT_RS12300	0.38	+0.0
2,809,881	+		BPHYT_RS12300	0.62	+0.2
2,809,881	+		BPHYT_RS12300	0.62	-1.7
2,809,881	+		BPHYT_RS12300	0.62	+0.8
2,809,882	-		BPHYT_RS12300	0.62	-0.0
2,809,925	+		BPHYT_RS12300	0.67	+1.6