Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS08610 and BPHYT_RS08615 are separated by 176 nucleotides BPHYT_RS08615 and BPHYT_RS08620 are separated by 390 nucleotides BPHYT_RS08620 and BPHYT_RS08625 are separated by 136 nucleotides
BPHYT_RS08610: BPHYT_RS08610 - hypothetical protein, at 1,963,849 to 1,964,127
_RS08610
BPHYT_RS08615: BPHYT_RS08615 - hypothetical protein, at 1,964,304 to 1,964,588
_RS08615
BPHYT_RS08620: BPHYT_RS08620 - epimerase, at 1,964,979 to 1,965,977
_RS08620
BPHYT_RS08625: BPHYT_RS08625 - TetR family transcriptional regulator, at 1,966,114 to 1,967,028
_RS08625
Position (kb) 1964
1965
1966 Strain fitness (log2 ratio) -1
0
1
2
3 at 1964.010 kb on + strand, within BPHYT_RS08610 at 1964.011 kb on - strand, within BPHYT_RS08610 at 1964.099 kb on - strand, within BPHYT_RS08610 at 1964.232 kb on - strand at 1964.439 kb on + strand, within BPHYT_RS08615 at 1964.631 kb on + strand at 1965.146 kb on - strand, within BPHYT_RS08620 at 1965.251 kb on - strand, within BPHYT_RS08620 at 1965.316 kb on + strand, within BPHYT_RS08620 at 1965.316 kb on + strand, within BPHYT_RS08620 at 1965.317 kb on - strand, within BPHYT_RS08620 at 1965.317 kb on - strand, within BPHYT_RS08620 at 1965.370 kb on + strand, within BPHYT_RS08620 at 1965.370 kb on + strand, within BPHYT_RS08620 at 1965.370 kb on + strand, within BPHYT_RS08620 at 1965.371 kb on - strand, within BPHYT_RS08620 at 1965.478 kb on + strand, within BPHYT_RS08620 at 1965.733 kb on + strand, within BPHYT_RS08620 at 1965.981 kb on + strand at 1965.981 kb on + strand at 1966.400 kb on - strand, within BPHYT_RS08625 at 1966.956 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/ml remove 1,964,010 + BPHYT_RS08610 0.58 -0.3 1,964,011 - BPHYT_RS08610 0.58 +0.7 1,964,099 - BPHYT_RS08610 0.90 +0.2 1,964,232 - +0.9 1,964,439 + BPHYT_RS08615 0.47 +1.2 1,964,631 + +1.3 1,965,146 - BPHYT_RS08620 0.17 +0.2 1,965,251 - BPHYT_RS08620 0.27 +0.1 1,965,316 + BPHYT_RS08620 0.34 +0.8 1,965,316 + BPHYT_RS08620 0.34 -0.1 1,965,317 - BPHYT_RS08620 0.34 -0.1 1,965,317 - BPHYT_RS08620 0.34 -0.4 1,965,370 + BPHYT_RS08620 0.39 +0.5 1,965,370 + BPHYT_RS08620 0.39 +1.1 1,965,370 + BPHYT_RS08620 0.39 +0.5 1,965,371 - BPHYT_RS08620 0.39 -0.1 1,965,478 + BPHYT_RS08620 0.50 +0.4 1,965,733 + BPHYT_RS08620 0.75 +0.3 1,965,981 + +2.9 1,965,981 + +0.0 1,966,400 - BPHYT_RS08625 0.31 -1.0 1,966,956 + +0.8
Or see this region's nucleotide sequence