Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07350
Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,665,969 | - | -0.5 | |||
1,666,664 | + | BPHYT_RS07350 | 0.79 | -0.8 | |
1,666,665 | - | BPHYT_RS07350 | 0.79 | -0.7 | |
1,666,923 | + | +0.0 | |||
1,666,923 | + | +0.1 | |||
1,666,984 | + | +0.4 | |||
1,666,985 | - | +1.1 | |||
1,666,986 | + | -1.6 | |||
1,667,016 | + | +0.1 | |||
1,667,174 | + | BPHYT_RS07355 | 0.28 | +0.4 | |
1,667,274 | + | BPHYT_RS07355 | 0.39 | +1.1 | |
1,667,274 | + | BPHYT_RS07355 | 0.39 | -0.2 | |
1,667,356 | + | BPHYT_RS07355 | 0.49 | +0.0 | |
1,667,359 | - | BPHYT_RS07355 | 0.49 | -0.1 | |
1,667,359 | - | BPHYT_RS07355 | 0.49 | +0.6 | |
1,667,359 | - | BPHYT_RS07355 | 0.49 | +0.8 | |
1,667,371 | - | BPHYT_RS07355 | 0.50 | -0.3 | |
1,667,429 | - | BPHYT_RS07355 | 0.57 | +0.0 | |
1,667,430 | + | +0.8 | |||
1,667,602 | - | BPHYT_RS07355 | 0.77 | -0.6 | |
1,667,806 | - | +0.7 |
Or see this region's nucleotide sequence