Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05390
Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,238,818 | - | BPHYT_RS05385 | 0.85 | +0.2 | |
1,238,818 | - | BPHYT_RS05385 | 0.85 | -0.5 | |
1,238,902 | - | +0.3 | |||
1,239,100 | + | -0.2 | |||
1,239,101 | - | -0.3 | |||
1,239,160 | + | -0.3 | |||
1,239,213 | - | -0.0 | |||
1,239,771 | - | -0.1 | |||
1,240,065 | + | BPHYT_RS05390 | 0.48 | +0.4 | |
1,240,249 | + | BPHYT_RS05390 | 0.77 | -0.1 | |
1,240,250 | - | BPHYT_RS05390 | 0.77 | +0.4 | |
1,240,367 | - | +0.8 | |||
1,240,441 | - | +0.1 | |||
1,240,517 | - | BPHYT_RS05395 | 0.41 | +1.4 |
Or see this region's nucleotide sequence