Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03470 and BPHYT_RS03475 are separated by 429 nucleotides BPHYT_RS03475 and BPHYT_RS03480 are separated by 398 nucleotides
BPHYT_RS03470: BPHYT_RS03470 - LysR family transcriptional regulator, at 782,438 to 783,397
_RS03470
BPHYT_RS03475: BPHYT_RS03475 - catalase, at 783,827 to 785,281
_RS03475
BPHYT_RS03480: BPHYT_RS03480 - ferritin, at 785,680 to 786,177
_RS03480
Position (kb) 783
784
785
786 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 783.166 kb on + strand, within BPHYT_RS03470 at 783.167 kb on - strand, within BPHYT_RS03470 at 783.395 kb on + strand at 783.395 kb on + strand at 783.527 kb on - strand at 783.709 kb on + strand at 783.710 kb on - strand at 783.768 kb on + strand at 783.769 kb on - strand at 783.804 kb on + strand at 783.838 kb on + strand at 783.839 kb on - strand at 783.839 kb on - strand at 784.034 kb on - strand, within BPHYT_RS03475 at 784.034 kb on - strand, within BPHYT_RS03475 at 784.172 kb on + strand, within BPHYT_RS03475 at 784.280 kb on + strand, within BPHYT_RS03475 at 784.421 kb on + strand, within BPHYT_RS03475 at 784.421 kb on + strand, within BPHYT_RS03475 at 784.422 kb on - strand, within BPHYT_RS03475 at 784.422 kb on - strand, within BPHYT_RS03475 at 784.521 kb on + strand, within BPHYT_RS03475 at 784.521 kb on + strand, within BPHYT_RS03475 at 784.522 kb on - strand, within BPHYT_RS03475 at 784.685 kb on + strand, within BPHYT_RS03475 at 784.685 kb on + strand, within BPHYT_RS03475 at 784.686 kb on - strand, within BPHYT_RS03475 at 784.686 kb on - strand at 784.736 kb on + strand, within BPHYT_RS03475 at 784.736 kb on + strand, within BPHYT_RS03475 at 784.736 kb on + strand, within BPHYT_RS03475 at 785.078 kb on + strand, within BPHYT_RS03475 at 785.078 kb on + strand, within BPHYT_RS03475 at 785.078 kb on + strand, within BPHYT_RS03475 at 785.079 kb on - strand, within BPHYT_RS03475 at 785.081 kb on + strand, within BPHYT_RS03475 at 785.081 kb on + strand, within BPHYT_RS03475 at 785.158 kb on + strand at 785.279 kb on + strand at 785.279 kb on + strand at 785.280 kb on - strand at 785.337 kb on + strand at 785.338 kb on - strand at 785.346 kb on + strand at 785.346 kb on + strand at 785.394 kb on - strand at 785.415 kb on + strand at 785.658 kb on - strand at 785.788 kb on + strand, within BPHYT_RS03480 at 785.788 kb on + strand, within BPHYT_RS03480 at 785.788 kb on + strand, within BPHYT_RS03480 at 785.788 kb on + strand, within BPHYT_RS03480 at 785.789 kb on - strand, within BPHYT_RS03480 at 785.789 kb on - strand, within BPHYT_RS03480 at 785.876 kb on - strand, within BPHYT_RS03480 at 786.175 kb on + strand at 786.175 kb on + strand at 786.176 kb on - strand at 786.179 kb on + strand at 786.244 kb on - strand at 786.244 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/ml remove 783,166 + BPHYT_RS03470 0.76 +0.8 783,167 - BPHYT_RS03470 0.76 +0.8 783,395 + +0.2 783,395 + +1.2 783,527 - -1.3 783,709 + -0.0 783,710 - -0.3 783,768 + -0.4 783,769 - -0.7 783,804 + -1.6 783,838 + -1.0 783,839 - -1.0 783,839 - -1.3 784,034 - BPHYT_RS03475 0.14 -0.6 784,034 - BPHYT_RS03475 0.14 -0.3 784,172 + BPHYT_RS03475 0.24 -0.2 784,280 + BPHYT_RS03475 0.31 -1.0 784,421 + BPHYT_RS03475 0.41 -0.1 784,421 + BPHYT_RS03475 0.41 -0.7 784,422 - BPHYT_RS03475 0.41 -0.9 784,422 - BPHYT_RS03475 0.41 +0.1 784,521 + BPHYT_RS03475 0.48 -0.3 784,521 + BPHYT_RS03475 0.48 -1.8 784,522 - BPHYT_RS03475 0.48 -0.7 784,685 + BPHYT_RS03475 0.59 -0.9 784,685 + BPHYT_RS03475 0.59 -1.0 784,686 - BPHYT_RS03475 0.59 -0.9 784,686 - +0.3 784,736 + BPHYT_RS03475 0.62 -0.8 784,736 + BPHYT_RS03475 0.62 -0.8 784,736 + BPHYT_RS03475 0.62 -1.3 785,078 + BPHYT_RS03475 0.86 +0.1 785,078 + BPHYT_RS03475 0.86 +0.1 785,078 + BPHYT_RS03475 0.86 -1.2 785,079 - BPHYT_RS03475 0.86 -0.7 785,081 + BPHYT_RS03475 0.86 -1.9 785,081 + BPHYT_RS03475 0.86 -0.7 785,158 + -0.6 785,279 + +1.2 785,279 + -3.4 785,280 - -0.1 785,337 + -0.8 785,338 - +0.7 785,346 + -2.1 785,346 + +0.1 785,394 - -0.6 785,415 + +0.2 785,658 - -0.9 785,788 + BPHYT_RS03480 0.22 -2.8 785,788 + BPHYT_RS03480 0.22 -2.9 785,788 + BPHYT_RS03480 0.22 -1.8 785,788 + BPHYT_RS03480 0.22 -2.1 785,789 - BPHYT_RS03480 0.22 -1.1 785,789 - BPHYT_RS03480 0.22 -2.9 785,876 - BPHYT_RS03480 0.39 +0.9 786,175 + -1.1 786,175 + +0.5 786,176 - -0.2 786,179 + -0.4 786,244 - +1.9 786,244 - -0.3
Or see this region's nucleotide sequence