Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03055 and BPHYT_RS03060 are separated by 95 nucleotides BPHYT_RS03060 and BPHYT_RS03065 are separated by 384 nucleotides
BPHYT_RS03055: BPHYT_RS03055 - LysR family transcriptional regulator, at 681,210 to 682,097
_RS03055
BPHYT_RS03060: BPHYT_RS03060 - MFS transporter, at 682,193 to 683,512
_RS03060
BPHYT_RS03065: BPHYT_RS03065 - LuxR family transcriptional regulator, at 683,897 to 684,535
_RS03065
Position (kb) 682
683
684 Strain fitness (log2 ratio) -1
0
1
2 at 681.375 kb on + strand, within BPHYT_RS03055 at 681.375 kb on + strand, within BPHYT_RS03055 at 681.376 kb on - strand, within BPHYT_RS03055 at 681.443 kb on - strand, within BPHYT_RS03055 at 681.443 kb on - strand, within BPHYT_RS03055 at 681.521 kb on - strand, within BPHYT_RS03055 at 681.787 kb on + strand, within BPHYT_RS03055 at 681.790 kb on + strand, within BPHYT_RS03055 at 681.790 kb on + strand, within BPHYT_RS03055 at 681.790 kb on + strand, within BPHYT_RS03055 at 681.791 kb on - strand, within BPHYT_RS03055 at 681.791 kb on - strand, within BPHYT_RS03055 at 682.751 kb on + strand, within BPHYT_RS03060 at 682.751 kb on + strand at 682.752 kb on - strand, within BPHYT_RS03060 at 682.753 kb on + strand, within BPHYT_RS03060 at 682.753 kb on + strand, within BPHYT_RS03060 at 682.753 kb on + strand, within BPHYT_RS03060 at 683.025 kb on + strand, within BPHYT_RS03060 at 683.026 kb on - strand, within BPHYT_RS03060 at 683.111 kb on + strand, within BPHYT_RS03060 at 683.111 kb on + strand, within BPHYT_RS03060 at 683.113 kb on + strand, within BPHYT_RS03060 at 683.126 kb on - strand, within BPHYT_RS03060 at 683.126 kb on - strand, within BPHYT_RS03060 at 683.126 kb on - strand, within BPHYT_RS03060 at 683.406 kb on + strand at 683.536 kb on + strand at 683.669 kb on - strand at 684.270 kb on - strand, within BPHYT_RS03065 at 684.503 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/ml remove 681,375 + BPHYT_RS03055 0.19 +1.9 681,375 + BPHYT_RS03055 0.19 -0.3 681,376 - BPHYT_RS03055 0.19 +0.3 681,443 - BPHYT_RS03055 0.26 -0.9 681,443 - BPHYT_RS03055 0.26 -0.4 681,521 - BPHYT_RS03055 0.35 -0.7 681,787 + BPHYT_RS03055 0.65 -0.0 681,790 + BPHYT_RS03055 0.65 +0.9 681,790 + BPHYT_RS03055 0.65 -0.3 681,790 + BPHYT_RS03055 0.65 -0.3 681,791 - BPHYT_RS03055 0.65 -0.2 681,791 - BPHYT_RS03055 0.65 +1.7 682,751 + BPHYT_RS03060 0.42 -0.7 682,751 + -0.1 682,752 - BPHYT_RS03060 0.42 +0.3 682,753 + BPHYT_RS03060 0.42 -0.7 682,753 + BPHYT_RS03060 0.42 -0.7 682,753 + BPHYT_RS03060 0.42 -0.7 683,025 + BPHYT_RS03060 0.63 -0.2 683,026 - BPHYT_RS03060 0.63 -0.6 683,111 + BPHYT_RS03060 0.70 -0.1 683,111 + BPHYT_RS03060 0.70 -0.3 683,113 + BPHYT_RS03060 0.70 -1.7 683,126 - BPHYT_RS03060 0.71 +0.0 683,126 - BPHYT_RS03060 0.71 +1.7 683,126 - BPHYT_RS03060 0.71 -0.0 683,406 + +0.3 683,536 + -0.3 683,669 - +0.2 684,270 - BPHYT_RS03065 0.58 -0.1 684,503 + -1.2
Or see this region's nucleotide sequence