Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_18440

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
4,148,311	-		AO356_18430	0.25	-0.4
4,148,325	+		AO356_18430	0.27	+0.5
4,148,326	-		AO356_18430	0.28	-0.1
4,148,458	+		AO356_18430	0.46	-1.9
4,148,503	-		AO356_18430	0.52	-0.7
4,148,503	-		AO356_18430	0.52	-0.6
4,148,503	-		AO356_18430	0.52	-0.0
4,148,503	-		AO356_18430	0.52	-0.1
4,148,616	+		AO356_18430	0.68	-0.2
4,148,616	+		AO356_18430	0.68	-0.0
4,148,616	+		AO356_18430	0.68	-0.1
4,148,616	+		AO356_18430	0.68	+0.2
4,148,617	-		AO356_18430	0.68	-0.1
4,148,617	-		AO356_18430	0.68	-0.0
4,148,617	-		AO356_18430	0.68	-0.4
4,148,802	+				+0.0
4,148,836	+				-0.3
4,148,837	-				-0.5
4,148,839	-				+0.3
4,148,839	-				-0.1
4,148,913	+		AO356_18435	0.31	+0.1
4,148,913	+		AO356_18435	0.31	-0.7
4,148,914	-		AO356_18435	0.31	+0.2
4,149,140	+				-0.4
4,149,140	+				+0.6
4,149,140	+				+1.5
4,149,140	+				+1.6
4,149,141	-				+0.9
4,149,141	-				+0.2
4,149,141	-				+1.4
4,149,204	+				+0.1
4,149,268	+				-0.4
4,149,324	-				-0.3
4,149,324	-				-0.1
4,149,324	-				-0.3
4,149,324	-				+0.4
4,149,623	+		AO356_18440	0.11	+0.9
4,149,623	+		AO356_18440	0.11	-0.4
4,149,623	+		AO356_18440	0.11	+0.3
4,149,623	+		AO356_18440	0.11	+0.2
4,149,623	+		AO356_18440	0.11	+0.2
4,149,623	+		AO356_18440	0.11	+0.4
4,149,623	+		AO356_18440	0.11	+0.4
4,149,623	+		AO356_18440	0.11	+0.7
4,149,623	+		AO356_18440	0.11	+0.6
4,149,623	+		AO356_18440	0.11	+0.6
4,149,623	+		AO356_18440	0.11	+1.4
4,149,624	-		AO356_18440	0.11	+0.5
4,149,624	-		AO356_18440	0.11	+0.2
4,149,624	-		AO356_18440	0.11	-0.2
4,149,624	-		AO356_18440	0.11	-0.9
4,149,624	-		AO356_18440	0.11	-1.1
4,149,624	-		AO356_18440	0.11	-0.9
4,149,624	-		AO356_18440	0.11	+0.6
4,149,624	-		AO356_18440	0.11	-0.0
4,149,624	-		AO356_18440	0.11	-0.5
4,149,624	-		AO356_18440	0.11	+1.1
4,149,624	-		AO356_18440	0.11	+2.4
4,149,624	-		AO356_18440	0.11	+0.0
4,149,624	-		AO356_18440	0.11	-0.1
4,149,624	-		AO356_18440	0.11	-1.2
4,149,750	+		AO356_18440	0.15	+0.2
4,149,750	+		AO356_18440	0.15	+1.3
4,149,751	-		AO356_18440	0.15	+0.3
4,149,751	-		AO356_18440	0.15	+0.2
4,149,800	-		AO356_18440	0.17	+1.6
4,150,028	+		AO356_18440	0.24	-0.4
4,150,028	+		AO356_18440	0.24	-0.5
4,150,028	+		AO356_18440	0.24	-1.0
4,150,028	+		AO356_18440	0.24	-0.1
4,150,028	+		AO356_18440	0.24	-2.1
4,150,029	-		AO356_18440	0.24	+0.5
4,150,029	-		AO356_18440	0.24	-0.0
4,150,031	+		AO356_18440	0.24	+0.6
4,150,031	+		AO356_18440	0.24	+0.1
4,150,031	+		AO356_18440	0.24	+0.6
4,150,031	+		AO356_18440	0.24	+0.9
4,150,031	+		AO356_18440	0.24	+1.2
4,150,031	+		AO356_18440	0.24	+0.7
4,150,031	+		AO356_18440	0.24	-0.4
4,150,031	+		AO356_18440	0.24	+0.6
4,150,031	+		AO356_18440	0.24	+0.6
4,150,032	-		AO356_18440	0.24	+0.4
4,150,032	-		AO356_18440	0.24	+1.2
4,150,091	+		AO356_18440	0.26	-0.7
4,150,092	-		AO356_18440	0.26	-0.4
4,150,092	-		AO356_18440	0.26	-0.1
4,150,092	-		AO356_18440	0.26	-0.2
4,150,092	-		AO356_18440	0.26	+0.8
4,150,523	+		AO356_18440	0.41	+0.1
4,150,523	+		AO356_18440	0.41	+0.3
4,150,523	+		AO356_18440	0.41	-0.5
4,150,524	-		AO356_18440	0.41	+0.3
4,150,524	-		AO356_18440	0.41	-0.2
4,150,547	+		AO356_18440	0.41	+2.1
4,150,547	+		AO356_18440	0.41	-0.4
4,150,547	+		AO356_18440	0.41	-0.0
4,150,547	+		AO356_18440	0.41	-0.7
4,150,547	+		AO356_18440	0.41	+0.1
4,150,548	-		AO356_18440	0.41	-0.1
4,150,548	-		AO356_18440	0.41	+1.4
4,150,548	-		AO356_18440	0.41	+0.9
4,150,548	-		AO356_18440	0.41	+0.6
4,150,548	-		AO356_18440	0.41	+0.2
4,150,548	-		AO356_18440	0.41	+0.2
4,150,548	-		AO356_18440	0.41	+0.1
4,150,550	+		AO356_18440	0.42	-0.1
4,150,551	-		AO356_18440	0.42	+0.7
4,150,576	-		AO356_18440	0.42	+1.4
4,150,576	-		AO356_18440	0.42	-0.3
4,150,576	-		AO356_18440	0.42	+0.4
4,150,576	-		AO356_18440	0.42	+0.6
4,150,590	+		AO356_18440	0.43	+0.9
4,150,592	+		AO356_18440	0.43	-0.5
4,150,592	+		AO356_18440	0.43	+0.5
4,150,592	+		AO356_18440	0.43	+0.1
4,150,592	+		AO356_18440	0.43	-0.6
4,150,593	-		AO356_18440	0.43	+0.6
4,150,593	-		AO356_18440	0.43	-0.4
4,150,593	-		AO356_18440	0.43	-0.1
4,150,593	-		AO356_18440	0.43	-0.2
4,150,593	-		AO356_18440	0.43	+0.4
4,150,593	-		AO356_18440	0.43	+2.0
4,150,593	-		AO356_18440	0.43	-0.1
4,150,593	-		AO356_18440	0.43	+0.2
4,150,593	-		AO356_18440	0.43	-0.5
4,150,593	-		AO356_18440	0.43	+0.6
4,150,593	-		AO356_18440	0.43	+1.0
4,150,985	+		AO356_18440	0.56	-0.4
4,150,985	+		AO356_18440	0.56	+1.0
4,150,985	+		AO356_18440	0.56	+0.6
4,150,985	+		AO356_18440	0.56	-0.3
4,150,985	+		AO356_18440	0.56	-0.2
4,150,985	+		AO356_18440	0.56	+0.0
4,150,985	+		AO356_18440	0.56	+0.5
4,150,985	+		AO356_18440	0.56	+0.5
4,150,986	-		AO356_18440	0.56	+1.6
4,150,986	-		AO356_18440	0.56	-1.5
4,151,047	+		AO356_18440	0.58	+0.2
4,151,047	+		AO356_18440	0.58	-0.5
4,151,048	-		AO356_18440	0.58	-0.4
4,151,233	+		AO356_18440	0.64	-0.6
4,151,343	+		AO356_18440	0.68	-0.0
4,151,343	+		AO356_18440	0.68	-0.1
4,151,344	-		AO356_18440	0.68	-0.3
4,151,478	-		AO356_18440	0.72	+0.6
4,151,478	-		AO356_18440	0.72	-1.0
4,151,478	-		AO356_18440	0.72	+0.4
4,151,516	+		AO356_18440	0.73	-0.1
4,151,516	+		AO356_18440	0.73	-0.1
4,151,516	+		AO356_18440	0.73	+0.4
4,151,516	+		AO356_18440	0.73	-0.2
4,151,516	+		AO356_18440	0.73	-0.2
4,151,517	-		AO356_18440	0.74	-0.3
4,151,651	+		AO356_18440	0.78	+0.0
4,151,651	+		AO356_18440	0.78	+0.6
4,151,651	+		AO356_18440	0.78	-0.1
4,151,651	+		AO356_18440	0.78	-0.2
4,151,651	+		AO356_18440	0.78	+0.1
4,151,652	-		AO356_18440	0.78	+0.4
4,151,652	-		AO356_18440	0.78	+0.4
4,151,652	-		AO356_18440	0.78	+0.2
4,151,852	+		AO356_18440	0.85	-1.5
4,151,852	+		AO356_18440	0.85	-0.6
4,151,900	+		AO356_18440	0.86	+0.4
4,151,900	+		AO356_18440	0.86	+0.4
4,151,900	+		AO356_18440	0.86	+0.6
4,151,900	+		AO356_18440	0.86	-0.2
4,151,900	+		AO356_18440	0.86	+0.1
4,151,900	+		AO356_18440	0.86	-0.1
4,151,900	+		AO356_18440	0.86	-1.0
4,151,901	-		AO356_18440	0.86	+0.7
4,151,901	-		AO356_18440	0.86	-0.2
4,151,901	-		AO356_18440	0.86	-0.3
4,151,901	-		AO356_18440	0.86	-1.4
4,151,901	-		AO356_18440	0.86	+0.2
4,151,901	-		AO356_18440	0.86	+0.3
4,151,901	-		AO356_18440	0.86	+1.1
4,152,038	+				+0.1
4,152,039	-				+0.5
4,152,039	-				-1.4
4,152,039	-				-0.2
4,152,083	+				-0.7
4,152,083	+				-0.4
4,152,083	+				-0.2
4,152,084	-				+0.9
4,152,084	-				+0.6
4,152,134	+				-1.3
4,152,134	+				-0.0
4,152,135	-				+2.3
4,152,168	-				+0.8
4,152,253	+				-0.1
4,152,254	-				+0.1
4,152,254	-				+1.4
4,152,585	+		AO356_18445	0.22	+0.1
4,152,585	+		AO356_18445	0.22	+1.2
4,152,585	+		AO356_18445	0.22	+0.3
4,152,585	+		AO356_18445	0.22	-0.3
4,152,585	+		AO356_18445	0.22	-0.1
4,152,585	+		AO356_18445	0.22	+0.2
4,152,586	-		AO356_18445	0.22	+1.5
4,152,586	-		AO356_18445	0.22	-0.4
4,152,586	-		AO356_18445	0.22	+0.1
4,152,586	-		AO356_18445	0.22	+0.2
4,152,586	-		AO356_18445	0.22	+0.9
4,152,586	-		AO356_18445	0.22	-0.4
4,152,586	-		AO356_18445	0.22	+0.9
4,152,586	-		AO356_18445	0.22	-1.4
4,152,609	+		AO356_18445	0.24	+0.4
4,152,610	-		AO356_18445	0.24	+0.7
4,152,610	-		AO356_18445	0.24	+0.2
4,152,867	+		AO356_18445	0.47	+0.2
4,152,867	+		AO356_18445	0.47	+0.2
4,152,867	+		AO356_18445	0.47	-0.8
4,152,867	+		AO356_18445	0.47	+0.3
4,152,868	-		AO356_18445	0.47	+0.6
4,152,868	-		AO356_18445	0.47	+0.8
4,152,868	-		AO356_18445	0.47	+1.5
4,152,868	-		AO356_18445	0.47	+1.3
4,152,880	-		AO356_18445	0.48	+0.6
4,152,880	-		AO356_18445	0.48	-0.9