Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_17185

Experiment: D-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_17180 and AO356_17185 are separated by 98 nucleotidesAO356_17185 and AO356_17190 are separated by 112 nucleotides AO356_17180: AO356_17180 - cell division protein FtsA, at 3,866,586 to 3,867,845 _17180 AO356_17185: AO356_17185 - cell division protein FtsZ, at 3,867,944 to 3,869,137 _17185 AO356_17190: AO356_17190 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, at 3,869,250 to 3,870,161 _17190 Position (kb) 3867 3868 3869 3870Strain fitness (log2 ratio) -1 0 1at 3867.908 kb on + strandat 3867.921 kb on + strandat 3869.192 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Lactate (C)
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3,867,908 + -0.5
3,867,921 + -0.7
3,869,192 + -0.5

Or see this region's nucleotide sequence