Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_14790

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
3,343,742	+		AO356_14785	0.88	+0.1
3,343,742	+		AO356_14785	0.88	-0.0
3,343,742	+		AO356_14785	0.88	+0.2
3,343,742	+		AO356_14785	0.88	-0.5
3,343,742	+		AO356_14785	0.88	-0.3
3,343,743	-		AO356_14785	0.88	+0.6
3,343,743	-		AO356_14785	0.88	-0.3
3,343,758	-		AO356_14785	0.89	+0.6
3,343,763	+		AO356_14785	0.89	+0.2
3,343,763	+		AO356_14785	0.89	-0.2
3,343,763	+		AO356_14785	0.89	+1.0
3,343,763	+		AO356_14785	0.89	+0.9
3,343,763	+		AO356_14785	0.89	+0.6
3,343,763	+		AO356_14785	0.89	-0.1
3,343,763	+		AO356_14785	0.89	-1.3
3,343,763	+		AO356_14785	0.89	+0.9
3,343,763	+		AO356_14785	0.89	+0.0
3,343,764	-		AO356_14785	0.89	-0.3
3,343,764	-		AO356_14785	0.89	-0.6
3,343,764	-		AO356_14785	0.89	-0.2
3,343,764	-		AO356_14785	0.89	+0.1
3,343,764	-		AO356_14785	0.89	-0.4
3,343,898	+				+0.6
3,343,898	+				+0.3
3,343,898	+				+0.4
3,343,898	+				-0.0
3,343,899	-				+1.3
3,343,899	-				+0.6
3,343,899	-				-0.3
3,343,899	-				+0.9
3,343,919	+				+1.0
3,343,919	+				+0.1
3,343,919	+				+0.4
3,343,919	+				+0.0
3,343,920	-				-1.1
3,343,920	-				+0.1
3,343,920	-				-0.2
3,343,941	-				+0.6
3,343,941	-				+0.5
3,343,941	-				+3.4
3,343,941	-				-0.2
3,344,029	-				-0.7
3,344,108	-				-0.5
3,344,108	-				+0.3
3,344,108	-				-1.0
3,344,113	+				+1.2
3,344,113	+				-1.3
3,344,113	+				+1.3
3,344,113	+				+0.6
3,344,113	+				-0.5
3,344,113	+				+0.9
3,344,113	+				-0.0
3,344,113	+				+0.1
3,344,113	+				-0.5
3,344,113	+				+0.9
3,344,113	+				+0.1
3,344,114	-				+0.0
3,344,114	-				-0.6
3,344,114	-				-0.6
3,344,114	-				-0.4
3,344,114	-				-0.6
3,344,115	+				+0.7
3,344,166	+				+0.6
3,344,166	+				+0.5
3,344,166	+				-0.5
3,344,166	+				-0.1
3,344,166	+				-0.8
3,344,166	+				+0.3
3,344,166	+				+0.2
3,344,167	-				-0.8
3,344,167	-				+0.8
3,344,167	-				+0.2
3,344,167	-				+0.8
3,344,167	-				+0.7
3,344,167	-				-1.3
3,344,167	-				+0.4
3,344,167	-				+0.3
3,344,167	-				-0.5
3,344,167	-				+0.1
3,344,167	-				-1.0
3,344,167	-				-0.2
3,344,197	+				-0.6
3,344,197	+				-0.8
3,344,197	+				+0.6
3,344,197	+				-0.0
3,344,197	+				-0.0
3,344,198	-				-0.7
3,344,198	-				+0.3
3,344,198	-				-1.2
3,344,199	+				+1.3
3,344,199	+				+0.5
3,344,199	+				+0.3
3,344,199	+				-0.8
3,344,199	+				-0.4
3,344,199	+				-1.1
3,344,199	+				-0.2
3,344,199	+				+0.5
3,344,199	+				+0.5
3,344,200	-				-0.5
3,344,200	-				+0.1
3,344,200	-				-0.9
3,344,200	-				-0.1
3,344,200	-				+1.1
3,344,200	-				+1.1
3,344,200	-				-0.1
3,344,223	+				-0.7
3,344,224	-				-1.0
3,344,224	-				-0.9
3,344,224	-				-1.2
3,344,224	-				-1.3
3,344,336	+				-2.5
3,344,336	+				-1.0
3,344,376	+				+0.8
3,344,376	+				-0.8
3,344,377	-				-1.5
3,344,377	-				-1.0
3,344,377	-				-0.7
3,344,377	-				-0.8
3,344,377	-				-1.7
3,344,377	-				-1.5
3,344,434	-		AO356_14790	0.13	-1.4
3,344,504	+		AO356_14790	0.18	-0.1
3,344,508	+		AO356_14790	0.18	-1.5
3,344,508	+		AO356_14790	0.18	-1.9
3,344,509	-		AO356_14790	0.18	-0.8
3,344,509	-		AO356_14790	0.18	-1.5
3,344,509	-		AO356_14790	0.18	-0.8
3,344,509	-		AO356_14790	0.18	+0.8
3,344,509	-		AO356_14790	0.18	-0.8
3,344,509	-		AO356_14790	0.18	+0.8
3,345,024	+		AO356_14790	0.55	-0.2
3,345,024	+		AO356_14790	0.55	-1.9
3,345,075	+		AO356_14790	0.59	+0.2
3,345,075	+		AO356_14790	0.59	-1.4
3,345,075	+		AO356_14790	0.59	-1.7
3,345,075	+		AO356_14790	0.59	-2.2
3,345,076	-		AO356_14790	0.59	-1.7
3,345,076	-		AO356_14790	0.59	-1.0
3,345,076	-		AO356_14790	0.59	-2.2
3,345,076	-		AO356_14790	0.59	-1.0
3,345,076	-		AO356_14790	0.59	-1.2
3,345,076	-		AO356_14790	0.59	-2.2
3,345,076	-		AO356_14790	0.59	-1.0
3,345,076	-		AO356_14790	0.59	-0.9
3,345,145	+		AO356_14790	0.64	-0.5
3,345,145	+		AO356_14790	0.64	-1.2
3,345,145	+		AO356_14790	0.64	-2.8
3,345,145	+		AO356_14790	0.64	-1.0
3,345,146	-		AO356_14790	0.64	-0.5
3,345,146	-		AO356_14790	0.64	-1.4
3,345,146	-		AO356_14790	0.64	-0.5
3,345,146	-		AO356_14790	0.64	-0.2
3,345,146	-		AO356_14790	0.64	-1.7
3,345,168	-		AO356_14790	0.65	-1.8
3,345,168	-		AO356_14790	0.65	-2.0
3,345,294	+		AO356_14790	0.74	-0.4
3,345,295	-		AO356_14790	0.74	-1.5
3,345,295	-		AO356_14790	0.74	-1.2
3,345,295	-		AO356_14790	0.74	-1.0
3,345,425	+		AO356_14790	0.84	-0.4
3,345,444	+		AO356_14790	0.85	+0.2
3,345,444	+		AO356_14790	0.85	+0.4
3,345,444	+		AO356_14790	0.85	+0.3
3,345,444	+		AO356_14790	0.85	-1.3
3,345,444	+		AO356_14790	0.85	-0.5
3,345,567	+				-0.2
3,345,567	+				-1.8
3,345,567	+				-2.7
3,345,567	+				-2.1
3,345,567	+				-3.6
3,345,567	+				-1.8
3,345,569	+				-0.1
3,345,569	+				-2.0
3,345,569	+				-1.3
3,345,651	+				-1.4
3,345,651	+				+0.4
3,346,210	+				+0.3
3,346,210	+				-0.7
3,346,211	-				-0.1
3,346,251	+				-0.0
3,346,251	+				+0.5
3,346,252	-				+0.9
3,346,252	-				-0.9
3,346,252	-				+2.8
3,346,252	-				+0.3
3,346,327	+				+0.5
3,346,327	+				-0.5
3,346,327	+				-1.5
3,346,328	-				-0.1
3,346,328	-				-0.0
3,346,328	-				+0.1
3,346,502	+		AO356_14800	0.40	-1.0
3,346,502	+		AO356_14800	0.40	+0.0
3,346,502	+		AO356_14800	0.40	+0.3
3,346,502	+		AO356_14800	0.40	-3.2
3,346,502	+		AO356_14800	0.40	-0.1
3,346,502	+		AO356_14800	0.40	+0.3
3,346,503	-		AO356_14800	0.40	-0.5
3,346,503	-		AO356_14800	0.40	-0.8
3,346,503	-		AO356_14800	0.40	+0.1
3,346,503	-		AO356_14800	0.40	+0.3
3,346,503	-		AO356_14800	0.40	+0.2
3,346,503	-		AO356_14800	0.40	+0.2
3,346,503	-		AO356_14800	0.40	+1.5
3,346,517	+		AO356_14800	0.43	+0.1
3,346,611	+		AO356_14800	0.63	-0.2
3,346,611	+		AO356_14800	0.63	+0.5
3,346,611	+		AO356_14800	0.63	-0.3
3,346,611	+		AO356_14800	0.63	-0.9
3,346,611	+		AO356_14800	0.63	-0.0
3,346,612	-		AO356_14800	0.63	-0.2
3,346,612	-		AO356_14800	0.63	-0.6
3,346,612	-		AO356_14800	0.63	+0.4
3,346,612	-		AO356_14800	0.63	-0.5
3,346,612	-		AO356_14800	0.63	+0.6
3,346,612	-		AO356_14800	0.63	+0.6