Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12020

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
2,724,069	-		AO356_12015	0.16	-3.2
2,724,069	-		AO356_12015	0.16	-1.7
2,724,242	+		AO356_12015	0.34	-1.2
2,724,242	+		AO356_12015	0.34	-0.1
2,724,243	-		AO356_12015	0.34	-2.7
2,724,243	-		AO356_12015	0.34	-3.0
2,724,243	-		AO356_12015	0.34	-2.4
2,724,296	+		AO356_12015	0.39	-2.5
2,724,296	+		AO356_12015	0.39	-3.2
2,724,296	+		AO356_12015	0.39	-0.6
2,724,297	-		AO356_12015	0.39	-2.7
2,724,297	-		AO356_12015	0.39	-3.9
2,724,551	+		AO356_12015	0.66	-1.6
2,724,551	+		AO356_12015	0.66	-2.5
2,724,551	+		AO356_12015	0.66	-2.3
2,724,551	+		AO356_12015	0.66	-2.5
2,724,551	+		AO356_12015	0.66	-3.2
2,724,551	+		AO356_12015	0.66	-2.5
2,724,552	-		AO356_12015	0.66	-2.8
2,724,552	-		AO356_12015	0.66	-2.8
2,724,552	-		AO356_12015	0.66	-2.8
2,724,552	-		AO356_12015	0.66	-0.5
2,724,552	-		AO356_12015	0.66	-3.5
2,724,622	-		AO356_12015	0.73	-1.5
2,724,692	+		AO356_12015	0.80	-1.9
2,724,692	+		AO356_12015	0.80	-2.7
2,724,692	+		AO356_12015	0.80	-1.0
2,724,692	+		AO356_12015	0.80	-0.6
2,724,692	+		AO356_12015	0.80	-2.2
2,724,692	+		AO356_12015	0.80	-1.0
2,724,692	+		AO356_12015	0.80	-2.0
2,724,692	+		AO356_12015	0.80	-1.5
2,724,693	-		AO356_12015	0.81	+0.3
2,724,693	-		AO356_12015	0.81	-1.0
2,724,693	-		AO356_12015	0.81	-2.5
2,724,693	-		AO356_12015	0.81	-2.7
2,724,710	+		AO356_12015	0.82	-0.6
2,724,710	+		AO356_12015	0.82	-2.5
2,724,710	+		AO356_12015	0.82	-2.1
2,724,711	-		AO356_12015	0.82	-1.6
2,724,711	-		AO356_12015	0.82	-3.5
2,724,711	-		AO356_12015	0.82	-1.9
2,724,711	-		AO356_12015	0.82	-2.5
2,724,711	-		AO356_12015	0.82	-2.6
2,724,711	-		AO356_12015	0.82	-2.2
2,724,711	-		AO356_12015	0.82	-3.1
2,724,758	-		AO356_12015	0.87	-2.0
2,724,806	+				-0.5
2,724,806	+				-2.4
2,724,806	+				-1.2
2,724,807	-				-2.5
2,724,807	-				-1.8
2,724,807	-				-3.2
2,724,807	-				-4.5
2,724,807	-				-2.1
2,724,807	-				-2.3
2,724,858	+				-0.9
2,724,918	+				-0.9
2,724,978	+				-2.1
2,725,003	-				-1.2
2,725,041	+				+0.1
2,725,071	+				-2.3
2,725,071	+				-1.6
2,725,072	-				-2.4
2,725,476	+		AO356_12020	0.29	-1.7
2,725,477	-		AO356_12020	0.29	-1.0
2,725,477	-		AO356_12020	0.29	-2.5
2,725,823	+		AO356_12020	0.53	-2.3
2,725,824	-		AO356_12020	0.53	-2.7
2,725,824	-		AO356_12020	0.53	-1.9
2,725,913	+		AO356_12020	0.60	-4.2
2,725,913	+		AO356_12020	0.60	-1.3
2,725,913	+		AO356_12020	0.60	-2.1
2,725,913	+		AO356_12020	0.60	-3.7
2,725,913	+		AO356_12020	0.60	-2.0
2,725,913	+		AO356_12020	0.60	-1.8
2,725,913	+		AO356_12020	0.60	-1.0
2,725,913	+		AO356_12020	0.60	-2.2
2,725,913	+		AO356_12020	0.60	-1.3
2,725,913	+		AO356_12020	0.60	-3.3
2,725,913	+		AO356_12020	0.60	-2.3
2,725,914	-		AO356_12020	0.60	-2.3
2,725,914	-		AO356_12020	0.60	-0.2
2,725,914	-		AO356_12020	0.60	-1.3
2,725,914	-		AO356_12020	0.60	-2.2
2,725,914	-		AO356_12020	0.60	-2.2
2,725,914	-		AO356_12020	0.60	-3.1
2,725,914	-		AO356_12020	0.60	+1.8
2,725,914	-		AO356_12020	0.60	-0.7
2,726,133	-		AO356_12020	0.75	-1.7
2,726,135	+		AO356_12020	0.75	-2.2
2,726,135	+		AO356_12020	0.75	-2.2
2,726,135	+		AO356_12020	0.75	-2.2
2,726,135	+		AO356_12020	0.75	-2.5
2,726,135	+		AO356_12020	0.75	-2.5
2,726,135	+		AO356_12020	0.75	-2.2
2,726,135	+		AO356_12020	0.75	-2.0
2,726,136	-		AO356_12020	0.75	-2.5
2,726,136	-		AO356_12020	0.75	-0.2
2,726,136	-		AO356_12020	0.75	-1.5
2,726,136	-		AO356_12020	0.75	-1.6
2,726,136	-		AO356_12020	0.75	-2.1
2,726,136	-		AO356_12020	0.75	-2.2
2,726,136	-		AO356_12020	0.75	-3.0
2,726,177	+		AO356_12020	0.78	-4.5
2,726,177	+		AO356_12020	0.78	-0.7
2,726,178	-		AO356_12020	0.78	-2.9
2,726,186	+		AO356_12020	0.79	-0.7
2,726,187	-		AO356_12020	0.79	-3.7
2,726,187	-		AO356_12020	0.79	-3.7
2,726,204	+		AO356_12020	0.80	-2.2
2,726,205	-		AO356_12020	0.80	-1.9
2,726,205	-		AO356_12020	0.80	-1.4
2,726,205	-		AO356_12020	0.80	-2.8
2,726,321	+		AO356_12020	0.89	-2.5
2,726,321	+		AO356_12020	0.89	-3.2
2,726,321	+		AO356_12020	0.89	-1.9
2,726,321	+		AO356_12020	0.89	-1.7
2,726,322	-		AO356_12020	0.89	-2.4
2,726,322	-		AO356_12020	0.89	-2.5
2,726,324	+		AO356_12020	0.89	-2.1
2,726,324	+		AO356_12020	0.89	-2.5
2,726,325	-		AO356_12020	0.89	-1.5
2,726,325	-		AO356_12020	0.89	-0.8
2,726,371	+				-3.0
2,726,371	+				-2.9
2,726,372	-				-1.9
2,726,372	-				-1.6
2,726,409	-				-3.8
2,726,409	-				-2.6
2,726,489	+				-3.0
2,726,489	+				-2.8
2,726,489	+				-1.7
2,726,489	+				-3.6
2,726,489	+				-2.6
2,726,490	-				-1.7
2,726,490	-				-3.0
2,726,490	-				-2.8
2,726,490	-				-2.2
2,726,490	-				-2.3
2,726,490	-				-2.1
2,726,490	-				-2.5
2,726,490	-				-2.5
2,726,490	-				-2.6
2,726,775	+		AO356_12025	0.15	-0.6
2,726,775	+		AO356_12025	0.15	-0.5
2,726,775	+		AO356_12025	0.15	-2.4
2,726,776	-		AO356_12025	0.15	-1.5
2,726,840	+		AO356_12025	0.19	-3.2
2,726,932	-		AO356_12025	0.24	-2.7
2,727,046	-		AO356_12025	0.30	-2.0
2,727,046	-		AO356_12025	0.30	-2.0
2,727,246	-		AO356_12025	0.41	-2.7
2,727,303	+		AO356_12025	0.45	-2.5
2,727,303	+		AO356_12025	0.45	-3.4
2,727,303	+		AO356_12025	0.45	-3.4
2,727,303	+		AO356_12025	0.45	-0.9
2,727,303	+		AO356_12025	0.45	-1.6
2,727,303	+		AO356_12025	0.45	-2.7
2,727,304	-		AO356_12025	0.45	-3.4
2,727,304	-		AO356_12025	0.45	-3.2
2,727,304	-		AO356_12025	0.45	-3.4
2,727,304	-		AO356_12025	0.45	-2.7
2,727,304	-		AO356_12025	0.45	-3.1
2,727,304	-		AO356_12025	0.45	-2.8
2,727,304	-		AO356_12025	0.45	-2.5
2,727,304	-		AO356_12025	0.45	-1.8
2,727,304	-		AO356_12025	0.45	-3.5
2,727,309	+		AO356_12025	0.45	-1.2
2,727,310	-		AO356_12025	0.45	-2.2
2,727,310	-		AO356_12025	0.45	-1.6
2,727,327	+		AO356_12025	0.46	-2.4
2,727,327	+		AO356_12025	0.46	-1.7
2,727,327	+		AO356_12025	0.46	-2.6
2,727,327	+		AO356_12025	0.46	-1.9
2,727,327	+		AO356_12025	0.46	-2.7
2,727,328	-		AO356_12025	0.46	-3.2
2,727,328	-		AO356_12025	0.46	-2.4
2,727,328	-		AO356_12025	0.46	-2.0
2,727,328	-		AO356_12025	0.46	-0.7
2,727,328	-		AO356_12025	0.46	-2.3
2,727,328	-		AO356_12025	0.46	-2.1