Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07445 and AO356_07450 are separated by 16 nucleotides AO356_07450 and AO356_07455 are separated by 8 nucleotides AO356_07455 and AO356_07460 are separated by 191 nucleotides AO356_07460 and AO356_07465 are separated by 106 nucleotides
AO356_07445: AO356_07445 - phosphoglucosamine mutase, at 1,647,267 to 1,648,604
_07445
AO356_07450: AO356_07450 - dihydropteroate synthase, at 1,648,621 to 1,649,472
_07450
AO356_07455: AO356_07455 - ATP-dependent metalloprotease, at 1,649,481 to 1,651,394
_07455
AO356_07460: AO356_07460 - 23S rRNA methyltransferase, at 1,651,586 to 1,652,236
_07460
AO356_07465: AO356_07465 - RNA-binding protein, at 1,652,343 to 1,652,651
_07465
Position (kb)
1649
1650
1651
1652 Strain fitness (log2 ratio)
-1
0
1
2 at 1648.623 kb on - strand at 1648.623 kb on - strand at 1648.623 kb on - strand at 1648.623 kb on - strand at 1648.623 kb on - strand at 1648.623 kb on - strand at 1649.483 kb on - strand at 1649.556 kb on - strand at 1651.406 kb on - strand at 1651.406 kb on - strand at 1651.406 kb on - strand at 1651.406 kb on - strand at 1651.406 kb on - strand at 1651.410 kb on - strand at 1651.410 kb on - strand at 1651.410 kb on - strand at 1651.454 kb on - strand at 1651.454 kb on - strand at 1651.466 kb on - strand at 1651.466 kb on - strand at 1651.466 kb on - strand at 1651.471 kb on - strand at 1651.471 kb on - strand at 1651.471 kb on - strand at 1651.471 kb on - strand at 1651.474 kb on - strand at 1651.474 kb on - strand at 1651.474 kb on - strand at 1651.474 kb on - strand at 1651.474 kb on - strand at 1651.474 kb on - strand at 1651.474 kb on - strand at 1651.479 kb on - strand at 1651.479 kb on - strand at 1651.479 kb on - strand at 1651.479 kb on - strand at 1651.479 kb on - strand at 1651.479 kb on - strand at 1651.479 kb on - strand at 1651.479 kb on - strand at 1651.479 kb on - strand at 1651.479 kb on - strand at 1651.483 kb on - strand at 1651.483 kb on - strand at 1651.576 kb on - strand at 1652.254 kb on - strand at 1652.270 kb on - strand at 1652.270 kb on - strand at 1652.270 kb on - strand at 1652.270 kb on - strand at 1652.270 kb on - strand at 1652.343 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 1,648,623 - +0.1 1,648,623 - +0.8 1,648,623 - -0.6 1,648,623 - +1.0 1,648,623 - +0.1 1,648,623 - +0.1 1,649,483 - +0.1 1,649,556 - +0.0 1,651,406 - +0.9 1,651,406 - +0.4 1,651,406 - -0.1 1,651,406 - +0.2 1,651,406 - +0.4 1,651,410 - -1.1 1,651,410 - -1.2 1,651,410 - +0.4 1,651,454 - -1.7 1,651,454 - -0.0 1,651,466 - -1.7 1,651,466 - -0.0 1,651,466 - +0.1 1,651,471 - -0.9 1,651,471 - +1.0 1,651,471 - -1.7 1,651,471 - +1.8 1,651,474 - +0.2 1,651,474 - +0.5 1,651,474 - +0.4 1,651,474 - +0.2 1,651,474 - -1.5 1,651,474 - +0.2 1,651,474 - +0.9 1,651,479 - +0.9 1,651,479 - +0.3 1,651,479 - -0.1 1,651,479 - -0.0 1,651,479 - -0.9 1,651,479 - +0.2 1,651,479 - +0.2 1,651,479 - +2.0 1,651,479 - -0.9 1,651,479 - -0.3 1,651,483 - -0.7 1,651,483 - +0.6 1,651,576 - +0.5 1,652,254 - +0.8 1,652,270 - -0.8 1,652,270 - -1.3 1,652,270 - -0.7 1,652,270 - +0.4 1,652,270 - -0.1 1,652,343 - +0.2
Or see this region's nucleotide sequence