Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_07455

Experiment: D-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_07445 and AO356_07450 are separated by 16 nucleotidesAO356_07450 and AO356_07455 are separated by 8 nucleotidesAO356_07455 and AO356_07460 are separated by 191 nucleotidesAO356_07460 and AO356_07465 are separated by 106 nucleotides AO356_07445: AO356_07445 - phosphoglucosamine mutase, at 1,647,267 to 1,648,604 _07445 AO356_07450: AO356_07450 - dihydropteroate synthase, at 1,648,621 to 1,649,472 _07450 AO356_07455: AO356_07455 - ATP-dependent metalloprotease, at 1,649,481 to 1,651,394 _07455 AO356_07460: AO356_07460 - 23S rRNA methyltransferase, at 1,651,586 to 1,652,236 _07460 AO356_07465: AO356_07465 - RNA-binding protein, at 1,652,343 to 1,652,651 _07465 Position (kb) 1649 1650 1651 1652Strain fitness (log2 ratio) -1 0 1 2at 1648.623 kb on - strandat 1648.623 kb on - strandat 1648.623 kb on - strandat 1648.623 kb on - strandat 1648.623 kb on - strandat 1648.623 kb on - strandat 1649.483 kb on - strandat 1649.556 kb on - strandat 1651.406 kb on - strandat 1651.406 kb on - strandat 1651.406 kb on - strandat 1651.406 kb on - strandat 1651.406 kb on - strandat 1651.410 kb on - strandat 1651.410 kb on - strandat 1651.410 kb on - strandat 1651.454 kb on - strandat 1651.454 kb on - strandat 1651.466 kb on - strandat 1651.466 kb on - strandat 1651.466 kb on - strandat 1651.471 kb on - strandat 1651.471 kb on - strandat 1651.471 kb on - strandat 1651.471 kb on - strandat 1651.474 kb on - strandat 1651.474 kb on - strandat 1651.474 kb on - strandat 1651.474 kb on - strandat 1651.474 kb on - strandat 1651.474 kb on - strandat 1651.474 kb on - strandat 1651.479 kb on - strandat 1651.479 kb on - strandat 1651.479 kb on - strandat 1651.479 kb on - strandat 1651.479 kb on - strandat 1651.479 kb on - strandat 1651.479 kb on - strandat 1651.479 kb on - strandat 1651.479 kb on - strandat 1651.479 kb on - strandat 1651.483 kb on - strandat 1651.483 kb on - strandat 1651.576 kb on - strandat 1652.254 kb on - strandat 1652.270 kb on - strandat 1652.270 kb on - strandat 1652.270 kb on - strandat 1652.270 kb on - strandat 1652.270 kb on - strandat 1652.343 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Lactate (C)
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1,648,623 - +0.1
1,648,623 - +0.8
1,648,623 - -0.6
1,648,623 - +1.0
1,648,623 - +0.1
1,648,623 - +0.1
1,649,483 - +0.1
1,649,556 - +0.0
1,651,406 - +0.9
1,651,406 - +0.4
1,651,406 - -0.1
1,651,406 - +0.2
1,651,406 - +0.4
1,651,410 - -1.1
1,651,410 - -1.2
1,651,410 - +0.4
1,651,454 - -1.7
1,651,454 - -0.0
1,651,466 - -1.7
1,651,466 - -0.0
1,651,466 - +0.1
1,651,471 - -0.9
1,651,471 - +1.0
1,651,471 - -1.7
1,651,471 - +1.8
1,651,474 - +0.2
1,651,474 - +0.5
1,651,474 - +0.4
1,651,474 - +0.2
1,651,474 - -1.5
1,651,474 - +0.2
1,651,474 - +0.9
1,651,479 - +0.9
1,651,479 - +0.3
1,651,479 - -0.1
1,651,479 - -0.0
1,651,479 - -0.9
1,651,479 - +0.2
1,651,479 - +0.2
1,651,479 - +2.0
1,651,479 - -0.9
1,651,479 - -0.3
1,651,483 - -0.7
1,651,483 - +0.6
1,651,576 - +0.5
1,652,254 - +0.8
1,652,270 - -0.8
1,652,270 - -1.3
1,652,270 - -0.7
1,652,270 - +0.4
1,652,270 - -0.1
1,652,343 - +0.2

Or see this region's nucleotide sequence