Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2542

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
2,883,559	+				-1.3
2,883,559	+				+0.2
2,883,688	+		Pf1N1B4_2541	0.21	-1.1
2,883,896	-		Pf1N1B4_2541	0.46	-1.4
2,883,896	-		Pf1N1B4_2541	0.46	-0.6
2,883,931	+		Pf1N1B4_2541	0.50	-0.9
2,883,931	+		Pf1N1B4_2541	0.50	-0.8
2,883,931	+		Pf1N1B4_2541	0.50	+1.3
2,883,931	+		Pf1N1B4_2541	0.50	-1.6
2,883,931	+		Pf1N1B4_2541	0.50	-0.3
2,883,931	+		Pf1N1B4_2541	0.50	-2.7
2,883,932	-		Pf1N1B4_2541	0.50	-1.8
2,883,932	-		Pf1N1B4_2541	0.50	-1.1
2,883,932	-		Pf1N1B4_2541	0.50	-0.9
2,883,932	-		Pf1N1B4_2541	0.50	-0.8
2,883,932	-		Pf1N1B4_2541	0.50	+0.1
2,883,932	-		Pf1N1B4_2541	0.50	+0.5
2,883,932	-		Pf1N1B4_2541	0.50	-0.2
2,883,932	-		Pf1N1B4_2541	0.50	-0.2
2,883,932	-		Pf1N1B4_2541	0.50	-0.3
2,883,932	-				-0.9
2,883,932	-		Pf1N1B4_2541	0.50	-0.1
2,883,933	+		Pf1N1B4_2541	0.50	+0.7
2,883,933	+		Pf1N1B4_2541	0.50	+0.3
2,883,933	+		Pf1N1B4_2541	0.50	-2.8
2,883,933	+		Pf1N1B4_2541	0.50	+0.8
2,883,933	+		Pf1N1B4_2541	0.50	-1.8
2,883,933	+		Pf1N1B4_2541	0.50	-2.2
2,883,933	+		Pf1N1B4_2541	0.50	+0.4
2,883,933	+		Pf1N1B4_2541	0.50	-2.7
2,883,934	-		Pf1N1B4_2541	0.51	+1.5
2,883,934	-		Pf1N1B4_2541	0.51	+0.9
2,883,934	-		Pf1N1B4_2541	0.51	-1.7
2,884,476	+				+1.5
2,884,517	-				-0.1
2,884,517	-				-1.1
2,884,519	+				+0.8
2,884,519	+				+0.3
2,884,519	+				-0.3
2,884,519	+				-1.3
2,884,520	-				+0.1
2,884,520	-				+1.9
2,884,520	-				-0.6
2,884,520	-				-0.3
2,884,520	-				-1.3
2,884,520	-				-2.0
2,884,520	-				-0.2
2,884,520	-				-1.1
2,884,520	-				+0.8
2,884,520	-				-0.2
2,884,520	-				-0.7
2,884,520	-				-1.1
2,884,520	-				+0.9
2,884,520	-				+0.5
2,884,538	-				-0.8
2,884,538	-				-0.3
2,884,541	+				-2.1
2,884,541	+				-1.6
2,884,541	+				+0.1
2,884,541	+				+1.3
2,884,541	+				+0.9
2,884,541	+				-0.7
2,884,541	+				+1.0
2,884,541	+				-0.9
2,884,541	+				-0.3
2,884,541	+				-1.4
2,884,541	+				-0.7
2,884,541	+				-0.5
2,884,541	+				-1.3
2,884,541	+				+0.9
2,884,541	+				+0.5
2,884,541	+				+0.9
2,884,542	-				-0.8
2,884,542	-				+0.9
2,884,542	-				+1.2
2,884,542	-				+0.2
2,884,542	-				-0.5
2,884,542	-				+0.6
2,884,542	-				-1.7
2,884,542	-				-1.9
2,884,542	-				+0.5
2,884,542	-				-1.1
2,884,542	-				+1.2
2,884,542	-				+0.3
2,884,542	-				-0.3
2,884,542	-				-0.5
2,884,542	-				+0.1
2,884,542	-				+0.9
2,884,542	-				+0.3
2,884,542	-				-0.1
2,884,542	-				-0.2
2,884,542	-				+0.3
2,884,542	-				+0.5
2,884,542	-				-0.3
2,884,542	-				-0.1
2,884,542	-				+0.9
2,884,542	-				-0.8
2,884,543	+				-1.7
2,884,543	+				+1.5
2,884,543	+				+0.9
2,884,543	+				-0.3
2,884,544	-				+0.3
2,884,544	-				+0.8
2,884,544	-				-1.4
2,884,544	-				-0.3
2,884,701	-		Pf1N1B4_2542	0.12	+2.1
2,884,801	+		Pf1N1B4_2542	0.21	+0.7
2,884,879	+		Pf1N1B4_2542	0.28	+0.8
2,884,880	-		Pf1N1B4_2542	0.28	+0.7
2,885,037	+		Pf1N1B4_2542	0.42	-1.1
2,885,037	+		Pf1N1B4_2542	0.42	+0.9
2,885,037	+		Pf1N1B4_2542	0.42	+0.6
2,885,037	+		Pf1N1B4_2542	0.42	+0.5
2,885,038	-		Pf1N1B4_2542	0.42	-0.8
2,885,038	-		Pf1N1B4_2542	0.42	-0.6
2,885,038	-		Pf1N1B4_2542	0.42	-1.1
2,885,050	+		Pf1N1B4_2542	0.43	+1.8
2,885,050	+		Pf1N1B4_2542	0.43	+0.5
2,885,050	+		Pf1N1B4_2542	0.43	+0.1
2,885,051	-		Pf1N1B4_2542	0.43	+0.5
2,885,158	+		Pf1N1B4_2542	0.52	+0.5
2,885,159	-		Pf1N1B4_2542	0.52	+2.1
2,885,221	-		Pf1N1B4_2542	0.58	-0.1
2,885,243	-		Pf1N1B4_2542	0.60	+0.5
2,885,243	-		Pf1N1B4_2542	0.60	+0.6
2,885,410	+		Pf1N1B4_2542	0.74	-0.2
2,885,410	+		Pf1N1B4_2542	0.74	+0.2
2,885,410	+		Pf1N1B4_2542	0.74	-0.4
2,885,410	+		Pf1N1B4_2542	0.74	+0.4
2,885,411	-		Pf1N1B4_2542	0.74	-1.5
2,885,411	-		Pf1N1B4_2542	0.74	-0.3
2,885,411	-		Pf1N1B4_2542	0.74	+0.3
2,885,689	+				+0.4
2,885,701	+				+1.3
2,885,701	+				+0.9
2,885,702	-				-1.3
2,885,702	-				+0.5
2,885,702	-				-0.5
2,885,704	+				-0.1
2,885,704	+				+0.3
2,885,704	+				-0.5
2,885,704	+				-0.5
2,885,704	+				-1.8
2,885,704	+				+1.0
2,885,704	+				-0.4
2,885,704	+				-0.8
2,885,704	+				+0.3
2,885,705	-				+0.3
2,885,705	-				+0.5
2,885,705	-				-1.9
2,885,705	-				-1.1
2,885,705	-				+1.1
2,885,705	-				-0.5
2,885,707	+				-2.3
2,885,749	+				+1.8
2,885,749	+				-1.8
2,885,750	-				-0.5
2,885,751	+				-0.1
2,885,751	+				+0.3
2,885,751	+				+0.0
2,885,751	+				-0.4
2,885,751	+				+1.0
2,885,751	+				-0.5
2,885,751	+				-0.9
2,885,751	+				-1.7
2,885,751	+				+0.7
2,885,751	+				-0.4
2,885,751	+				-1.3
2,885,751	+				+0.5
2,885,751	+				+0.5
2,885,751	+				-1.2
2,885,751	+				+0.5
2,885,751	+				-2.1
2,885,751	+				-0.4
2,885,751	+				+1.0
2,885,751	+				-0.6
2,885,751	+				-0.8
2,885,752	-				-0.5
2,885,752	-				+0.8
2,885,752	-				-0.8
2,885,752	-				+1.1
2,885,752	-				-0.4
2,885,752	-				-1.1
2,885,752	-				+0.5
2,885,752	-				-0.9
2,885,752	-				-0.8
2,885,752	-				+0.5
2,885,752	-				-0.1
2,885,752	-				-0.1
2,885,752	-				+1.1
2,886,571	+		Pf1N1B4_2544	0.13	+0.4