Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1652

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
1,892,145	-		Pf1N1B4_1651	0.32	+1.1
1,892,255	+		Pf1N1B4_1651	0.82	+2.0
1,892,278	-				-0.2
1,892,278	-				+0.1
1,892,350	+				+0.5
1,892,350	+				-0.4
1,892,350	+				-0.4
1,892,350	+				-1.9
1,892,350	+				-0.3
1,892,350	+				+1.2
1,892,350	+				-1.3
1,892,350	+				+0.3
1,892,350	+				+0.2
1,892,351	-				-1.2
1,892,351	-				-0.3
1,892,351	-				+0.4
1,892,351	-				-0.0
1,892,351	-				+0.3
1,892,351	-				+0.0
1,892,351	-				-0.3
1,892,395	+				+0.2
1,892,408	+				+1.1
1,892,417	+				+0.7
1,892,418	-				+0.7
1,892,485	-				-0.7
1,892,503	+				+0.4
1,892,503	+				-1.8
1,892,503	+				+0.5
1,892,503	+				+0.2
1,892,504	-				-1.2
1,892,504	-				+0.3
1,892,504	-				+0.4
1,892,645	+				+0.7
1,892,654	+				-0.7
1,892,654	+				-1.3
1,892,654	+				+1.1
1,892,655	-				+0.7
1,892,655	-				+0.2
1,892,655	-				+0.1
1,892,725	+				-0.3
1,892,725	+				-1.3
1,892,726	-				-0.7
1,892,736	+				+0.1
1,892,736	+				-0.9
1,892,736	+				-0.2
1,892,736	+				-0.9
1,892,736	+				+1.3
1,892,736	+				-0.5
1,892,736	+				-0.0
1,892,737	-				+0.1
1,892,737	-				+0.1
1,892,737	-				+0.1
1,892,737	-				+0.2
1,892,790	-				+0.1
1,892,790	-				-0.1
1,892,790	-				-0.2
1,892,880	-				+0.1
1,892,880	-				-0.3
1,892,880	-				+0.9
1,892,880	-				-0.5
1,892,953	-				+0.9
1,892,990	-				+0.7
1,893,000	-				-1.3
1,893,000	-				-0.0
1,893,000	-				-2.1
1,893,046	+				-1.7
1,893,046	+				-0.9
1,893,046	+				+0.9
1,893,046	+				+0.9
1,893,046	+				-1.5
1,893,047	-				-1.8
1,893,047	-				-0.9
1,893,047	-				+0.1
1,893,047	-				-0.3
1,893,047	-				+0.1
1,893,047	-				-0.9
1,893,047	-				+1.1
1,893,047	-				+2.4
1,893,050	+				-1.2
1,893,050	+				+0.5
1,893,050	+				-1.8
1,893,051	-				+0.3
1,893,051	-				-1.4
1,893,229	-		Pf1N1B4_1652	0.19	-1.2
1,893,229	-		Pf1N1B4_1652	0.19	-0.7
1,893,229	-		Pf1N1B4_1652	0.19	-1.0
1,893,320	+		Pf1N1B4_1652	0.29	-1.4
1,893,321	-		Pf1N1B4_1652	0.29	-0.9
1,893,321	-		Pf1N1B4_1652	0.29	+0.7
1,893,321	-		Pf1N1B4_1652	0.29	-0.9
1,893,387	+		Pf1N1B4_1652	0.37	-1.8
1,893,388	-		Pf1N1B4_1652	0.37	-0.7
1,893,405	+		Pf1N1B4_1652	0.39	-1.5
1,893,406	-		Pf1N1B4_1652	0.39	-0.7
1,893,514	+		Pf1N1B4_1652	0.51	-1.7
1,893,514	+		Pf1N1B4_1652	0.51	-0.3
1,893,514	+		Pf1N1B4_1652	0.51	+1.1
1,893,514	+		Pf1N1B4_1652	0.51	-1.1
1,893,514	+		Pf1N1B4_1652	0.51	-1.5
1,893,515	-		Pf1N1B4_1652	0.51	-1.1
1,893,515	-		Pf1N1B4_1652	0.51	+1.7
1,893,515	-		Pf1N1B4_1652	0.51	-2.2
1,893,515	-		Pf1N1B4_1652	0.51	-0.9
1,893,515	-		Pf1N1B4_1652	0.51	-0.5
1,893,515	-				-0.9
1,893,515	-		Pf1N1B4_1652	0.51	-0.3
1,893,578	+		Pf1N1B4_1652	0.58	-1.0
1,893,578	+		Pf1N1B4_1652	0.58	+0.7
1,893,578	+		Pf1N1B4_1652	0.58	+1.0
1,893,579	-		Pf1N1B4_1652	0.58	-0.6
1,893,579	-		Pf1N1B4_1652	0.58	-0.7
1,893,612	+		Pf1N1B4_1652	0.62	-0.3
1,893,657	+		Pf1N1B4_1652	0.67	+0.7
1,893,657	+		Pf1N1B4_1652	0.67	-0.3
1,893,681	+		Pf1N1B4_1652	0.69	+0.7
1,893,681	+		Pf1N1B4_1652	0.69	-1.2
1,893,681	+				+1.7
1,893,681	+		Pf1N1B4_1652	0.69	+0.9
1,893,681	+		Pf1N1B4_1652	0.69	-3.1
1,893,681	+		Pf1N1B4_1652	0.69	-0.9
1,893,681	+		Pf1N1B4_1652	0.69	-0.2
1,893,681	+		Pf1N1B4_1652	0.69	-1.5
1,893,681	+		Pf1N1B4_1652	0.69	-1.6
1,893,682	-		Pf1N1B4_1652	0.69	+0.1
1,893,682	-		Pf1N1B4_1652	0.69	+0.1
1,893,682	-		Pf1N1B4_1652	0.69	-0.4
1,893,682	-		Pf1N1B4_1652	0.69	+0.5
1,893,682	-		Pf1N1B4_1652	0.69	-1.5
1,893,682	-		Pf1N1B4_1652	0.69	+0.4
1,893,682	-		Pf1N1B4_1652	0.69	-0.8
1,893,682	-		Pf1N1B4_1652	0.69	-0.8
1,893,682	-		Pf1N1B4_1652	0.69	-1.5
1,893,682	-		Pf1N1B4_1652	0.69	-0.9
1,893,824	+		Pf1N1B4_1652	0.85	-1.2
1,893,824	+		Pf1N1B4_1652	0.85	-1.9
1,893,874	+				+0.1
1,893,874	+				+0.7
1,893,875	-				-0.7
1,893,875	-				+0.1
1,893,875	-				-0.3
1,893,875	-				-1.3
1,893,875	-				-0.9
1,893,875	-				+0.1
1,893,898	+				-3.0
1,893,898	+				+0.1
1,893,898	+				-0.8
1,893,899	-				+0.1
1,893,899	-				-0.3
1,893,899	-				-2.3
1,893,899	-				-0.2
1,893,899	-				-0.5
1,893,946	+				+0.7
1,893,947	-				-2.3
1,893,947	-				-2.9
1,893,947	-				-3.4
1,893,947	-				-0.8
1,893,947	-				-1.0
1,893,947	-				+1.0
1,893,954	+				-1.9
1,893,954	+				+0.7
1,893,954	+				-0.9
1,893,954	+				-2.5
1,893,954	+				+0.1
1,893,954	+				-0.2
1,893,954	+				-0.4
1,893,954	+				-0.2
1,893,954	+				-1.8
1,893,954	+				-1.9
1,893,954	+				+0.1
1,893,955	-				+1.7
1,893,955	-				-0.9
1,893,955	-				-0.3
1,893,955	-				-1.2
1,893,955	-				+1.7
1,893,955	-				+1.7
1,893,955	-				-1.5
1,893,955	-				-1.2
1,893,955	-				-0.9
1,893,955	-				-0.2
1,893,955	-				-2.6
1,893,976	+				+0.9
1,893,976	+				+0.3
1,893,976	+				-1.2
1,893,976	+				-0.7
1,893,976	+				-0.9
1,893,976	+				-0.9
1,893,976	+				-2.7
1,893,977	-				-2.9
1,893,977	-				-0.3
1,893,977	-				+0.4
1,893,977	-				-2.5
1,893,977	-				-2.7
1,893,979	-				-0.3
1,894,063	+				-2.3
1,894,064	-				-2.3
1,894,064	-				-1.7
1,894,064	-				-1.9
1,894,153	-				+0.1
1,894,153	-				-1.9
1,894,190	+				-1.3
1,894,190	+				-0.3
1,894,190	+				+0.1
1,894,190	+				-1.3
1,894,190	+				-1.5
1,894,191	-				-0.9
1,894,191	-				+1.7
1,894,191	-				-1.2
1,894,191	-				+0.7
1,894,191	-				+1.1
1,894,191	-				-0.6
1,894,191	-				-1.6
1,894,191	-				-0.7
1,894,191	-				-0.7
1,894,191	-				-1.9
1,894,222	+				-0.6
1,894,223	-				-1.8
1,894,226	+				-0.9
1,894,226	+				+0.1
1,894,227	-				+0.5
1,894,227	-				+0.8
1,894,227	-				-2.0
1,894,227	-				-2.4
1,894,227	-				-1.5
1,894,227	-				-1.2
1,894,227	-				-2.0
1,894,227	-				-1.4
1,894,227	-				+0.1
1,894,227	-				+0.7
1,894,227	-				-1.3
1,894,227	-				-1.0
1,894,300	+		Pf1N1B4_1653	0.18	-1.0
1,894,300	+		Pf1N1B4_1653	0.18	-0.7
1,894,301	-		Pf1N1B4_1653	0.18	-1.5
1,894,332	+		Pf1N1B4_1653	0.23	+0.7
1,894,333	-		Pf1N1B4_1653	0.23	-0.7
1,894,333	-		Pf1N1B4_1653	0.23	-0.2
1,894,333	-		Pf1N1B4_1653	0.23	-1.4
1,894,333	-		Pf1N1B4_1653	0.23	-2.9
1,894,333	-		Pf1N1B4_1653	0.23	-2.5
1,894,333	-		Pf1N1B4_1653	0.23	-1.3
1,894,333	-		Pf1N1B4_1653	0.23	-0.8
1,894,333	-		Pf1N1B4_1653	0.23	-1.3
1,894,357	-		Pf1N1B4_1653	0.26	-0.3
1,894,357	-		Pf1N1B4_1653	0.26	+0.7
1,894,357	-		Pf1N1B4_1653	0.26	-0.1
1,894,368	+		Pf1N1B4_1653	0.28	-1.9
1,894,369	-		Pf1N1B4_1653	0.28	+0.1
1,894,369	-		Pf1N1B4_1653	0.28	-0.5
1,894,369	-		Pf1N1B4_1653	0.28	-0.2
1,894,444	-		Pf1N1B4_1653	0.38	-1.3
1,894,464	+		Pf1N1B4_1653	0.41	-2.9
1,894,465	-		Pf1N1B4_1653	0.41	-0.3
1,894,596	+		Pf1N1B4_1653	0.60	+0.7
1,894,596	+		Pf1N1B4_1653	0.60	-1.9
1,894,597	-		Pf1N1B4_1653	0.60	-0.7
1,894,597	-		Pf1N1B4_1653	0.60	-1.3
1,894,597	-		Pf1N1B4_1653	0.60	-1.5
1,894,597	-		Pf1N1B4_1653	0.60	-2.9
1,894,597	-		Pf1N1B4_1653	0.60	-1.5
1,894,597	-		Pf1N1B4_1653	0.60	-0.7
1,894,637	-		Pf1N1B4_1653	0.65	-0.3
1,894,797	+		Pf1N1B4_1653	0.88	-1.3
1,894,798	-		Pf1N1B4_1653	0.88	-2.0
1,894,798	-				+0.1
1,894,885	+				-0.9
1,894,885	+				+0.7
1,894,885	+				-2.0
1,894,885	+				+0.1
1,894,885	+				-1.5
1,894,885	+				-0.7
1,894,885	+				-1.5
1,894,886	-				-1.9
1,894,886	-				-2.3
1,894,886	-				-0.3
1,894,886	-				-1.7
1,894,886	-				-0.7
1,894,886	-				-0.3
1,894,886	-				+0.4
1,894,886	-				-1.0
1,894,886	-				-0.3
1,894,886	-				-0.5
1,894,902	+				-1.7
1,894,902	+				-1.3
1,894,903	-				+0.4