Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS05750 and HSERO_RS05755 overlap by 22 nucleotides HSERO_RS05755 and HSERO_RS05760 overlap by 4 nucleotides HSERO_RS05760 and HSERO_RS05765 are separated by 220 nucleotides
HSERO_RS05750: HSERO_RS05750 - hypothetical protein, at 1,309,162 to 1,309,893
_RS05750
HSERO_RS05755: HSERO_RS05755 - 2-dehydropantoate 2-reductase, at 1,309,872 to 1,310,828
_RS05755
HSERO_RS05760: HSERO_RS05760 - MFS transporter, at 1,310,825 to 1,312,207
_RS05760
HSERO_RS05765: HSERO_RS05765 - salicylaldehyde dehydrogenase, at 1,312,428 to 1,313,879
_RS05765
Position (kb) 1310
1311
1312
1313 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1309.895 kb on - strand at 1309.966 kb on - strand at 1310.311 kb on + strand, within HSERO_RS05755 at 1310.367 kb on + strand, within HSERO_RS05755 at 1310.397 kb on - strand, within HSERO_RS05755 at 1310.412 kb on + strand, within HSERO_RS05755 at 1310.483 kb on + strand, within HSERO_RS05755 at 1310.506 kb on + strand, within HSERO_RS05755 at 1310.509 kb on - strand, within HSERO_RS05755 at 1310.514 kb on - strand, within HSERO_RS05755 at 1310.579 kb on - strand, within HSERO_RS05755 at 1310.699 kb on + strand, within HSERO_RS05755 at 1310.707 kb on - strand, within HSERO_RS05755 at 1310.878 kb on + strand at 1310.884 kb on - strand at 1310.968 kb on - strand, within HSERO_RS05760 at 1310.998 kb on + strand, within HSERO_RS05760 at 1311.020 kb on + strand, within HSERO_RS05760 at 1311.060 kb on + strand, within HSERO_RS05760 at 1311.087 kb on - strand, within HSERO_RS05760 at 1311.095 kb on - strand, within HSERO_RS05760 at 1311.097 kb on + strand, within HSERO_RS05760 at 1311.182 kb on - strand, within HSERO_RS05760 at 1311.263 kb on - strand, within HSERO_RS05760 at 1311.295 kb on - strand, within HSERO_RS05760 at 1311.323 kb on + strand, within HSERO_RS05760 at 1311.659 kb on + strand, within HSERO_RS05760 at 1311.714 kb on - strand, within HSERO_RS05760 at 1311.721 kb on - strand, within HSERO_RS05760 at 1311.826 kb on - strand, within HSERO_RS05760 at 1311.836 kb on - strand, within HSERO_RS05760 at 1311.907 kb on - strand, within HSERO_RS05760 at 1312.189 kb on - strand at 1312.260 kb on + strand at 1312.333 kb on + strand at 1312.360 kb on - strand at 1312.450 kb on - strand at 1312.556 kb on - strand at 1312.572 kb on + strand at 1312.776 kb on - strand, within HSERO_RS05765 at 1312.840 kb on + strand, within HSERO_RS05765 at 1312.877 kb on + strand, within HSERO_RS05765 at 1312.913 kb on - strand, within HSERO_RS05765 at 1313.036 kb on - strand at 1313.116 kb on + strand, within HSERO_RS05765
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 1,309,895 - -0.3 1,309,966 - -0.9 1,310,311 + HSERO_RS05755 0.46 -0.4 1,310,367 + HSERO_RS05755 0.52 +1.0 1,310,397 - HSERO_RS05755 0.55 -3.6 1,310,412 + HSERO_RS05755 0.56 +1.5 1,310,483 + HSERO_RS05755 0.64 -0.0 1,310,506 + HSERO_RS05755 0.66 +1.3 1,310,509 - HSERO_RS05755 0.67 +0.7 1,310,514 - HSERO_RS05755 0.67 +0.1 1,310,579 - HSERO_RS05755 0.74 -0.8 1,310,699 + HSERO_RS05755 0.86 -0.0 1,310,707 - HSERO_RS05755 0.87 +0.1 1,310,878 + +1.0 1,310,884 - -0.1 1,310,968 - HSERO_RS05760 0.10 -0.6 1,310,998 + HSERO_RS05760 0.13 +0.5 1,311,020 + HSERO_RS05760 0.14 +0.7 1,311,060 + HSERO_RS05760 0.17 +0.4 1,311,087 - HSERO_RS05760 0.19 -2.6 1,311,095 - HSERO_RS05760 0.20 +1.9 1,311,097 + HSERO_RS05760 0.20 +0.3 1,311,182 - HSERO_RS05760 0.26 -0.0 1,311,263 - HSERO_RS05760 0.32 -0.5 1,311,295 - HSERO_RS05760 0.34 +0.0 1,311,323 + HSERO_RS05760 0.36 -0.0 1,311,659 + HSERO_RS05760 0.60 -0.4 1,311,714 - HSERO_RS05760 0.64 +2.0 1,311,721 - HSERO_RS05760 0.65 +1.3 1,311,826 - HSERO_RS05760 0.72 -1.5 1,311,836 - HSERO_RS05760 0.73 -0.4 1,311,907 - HSERO_RS05760 0.78 +0.3 1,312,189 - -1.4 1,312,260 + -0.6 1,312,333 + -1.3 1,312,360 - -1.0 1,312,450 - +0.4 1,312,556 - +2.8 1,312,572 + +0.4 1,312,776 - HSERO_RS05765 0.24 +0.7 1,312,840 + HSERO_RS05765 0.28 +0.5 1,312,877 + HSERO_RS05765 0.31 +0.8 1,312,913 - HSERO_RS05765 0.33 +0.2 1,313,036 - +0.5 1,313,116 + HSERO_RS05765 0.47 -0.1
Or see this region's nucleotide sequence