Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1159

Experiment: Cholin acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 10 mM
1,185,538	+		Ga0059261_1158	0.69	-0.4
1,185,538	+		Ga0059261_1158	0.69	+0.0
1,185,538	+		Ga0059261_1158	0.69	+1.2
1,185,538	+		Ga0059261_1158	0.69	+0.4
1,185,538	+		Ga0059261_1158	0.69	-0.4
1,185,538	+		Ga0059261_1158	0.69	+0.5
1,185,538	+		Ga0059261_1158	0.69	-0.4
1,185,539	-		Ga0059261_1158	0.69	+0.8
1,185,539	-		Ga0059261_1158	0.69	+0.5
1,185,539	-		Ga0059261_1158	0.69	+0.2
1,185,539	-		Ga0059261_1158	0.69	+1.1
1,185,539	-		Ga0059261_1158	0.69	-1.2
1,185,539	-		Ga0059261_1158	0.69	+1.4
1,185,539	-		Ga0059261_1158	0.69	-0.6
1,185,539	-		Ga0059261_1158	0.69	-0.1
1,185,539	-				+0.9
1,185,540	+		Ga0059261_1158	0.69	+0.8
1,185,540	+		Ga0059261_1158	0.69	+0.8
1,185,540	+		Ga0059261_1158	0.69	-0.2
1,185,540	+		Ga0059261_1158	0.69	+1.2
1,185,540	+		Ga0059261_1158	0.69	+0.9
1,185,541	-		Ga0059261_1158	0.69	-0.5
1,185,541	-		Ga0059261_1158	0.69	+0.9
1,185,601	+		Ga0059261_1158	0.71	+0.5
1,185,601	+		Ga0059261_1158	0.71	+0.9
1,185,601	+		Ga0059261_1158	0.71	+0.9
1,185,601	+		Ga0059261_1158	0.71	+0.9
1,185,601	+		Ga0059261_1158	0.71	-1.1
1,185,602	-		Ga0059261_1158	0.71	-0.6
1,185,602	-		Ga0059261_1158	0.71	-0.4
1,185,602	-		Ga0059261_1158	0.71	+0.6
1,185,602	-		Ga0059261_1158	0.71	+0.1
1,185,606	+		Ga0059261_1158	0.72	+0.2
1,185,606	+		Ga0059261_1158	0.72	-0.6
1,185,606	+		Ga0059261_1158	0.72	+0.4
1,185,606	+		Ga0059261_1158	0.72	+0.3
1,185,606	+		Ga0059261_1158	0.72	+0.5
1,185,606	+		Ga0059261_1158	0.72	-0.1
1,185,606	+				+0.2
1,185,607	-		Ga0059261_1158	0.72	+0.4
1,185,607	-		Ga0059261_1158	0.72	-0.3
1,185,631	-		Ga0059261_1158	0.73	-0.6
1,185,723	+		Ga0059261_1158	0.76	+0.3
1,185,723	+		Ga0059261_1158	0.76	+0.1
1,185,723	+		Ga0059261_1158	0.76	+0.2
1,185,723	+		Ga0059261_1158	0.76	-0.2
1,185,724	-		Ga0059261_1158	0.76	-0.4
1,185,724	-		Ga0059261_1158	0.76	+0.3
1,185,724	-		Ga0059261_1158	0.76	+0.9
1,185,724	-		Ga0059261_1158	0.76	-0.8
1,185,825	+		Ga0059261_1158	0.80	+1.4
1,185,825	+		Ga0059261_1158	0.80	+0.9
1,185,897	+		Ga0059261_1158	0.82	+1.1
1,185,897	+		Ga0059261_1158	0.82	+0.6
1,185,897	+		Ga0059261_1158	0.82	-0.1
1,185,897	+		Ga0059261_1158	0.82	-1.4
1,185,897	+		Ga0059261_1158	0.82	+0.2
1,185,897	+		Ga0059261_1158	0.82	+0.4
1,185,898	-		Ga0059261_1158	0.82	+0.2
1,185,898	-		Ga0059261_1158	0.82	-0.1
1,185,898	-		Ga0059261_1158	0.82	+0.4
1,185,898	-		Ga0059261_1158	0.82	-0.1
1,185,898	-		Ga0059261_1158	0.82	+0.3
1,185,898	-		Ga0059261_1158	0.82	-0.1
1,185,898	-		Ga0059261_1158	0.82	+0.5
1,185,898	-		Ga0059261_1158	0.82	-1.4
1,185,964	+		Ga0059261_1158	0.85	-0.1
1,185,964	+		Ga0059261_1158	0.85	+0.2
1,185,965	-		Ga0059261_1158	0.85	+0.0
1,185,967	-		Ga0059261_1158	0.85	-0.1
1,185,988	+		Ga0059261_1158	0.86	-0.7
1,185,989	-		Ga0059261_1158	0.86	+0.7
1,185,990	+		Ga0059261_1158	0.86	+0.1
1,185,990	+		Ga0059261_1158	0.86	+1.0
1,185,990	+		Ga0059261_1158	0.86	-0.2
1,185,990	+		Ga0059261_1158	0.86	+0.2
1,185,990	+		Ga0059261_1158	0.86	+0.6
1,185,991	-		Ga0059261_1158	0.86	+0.2
1,185,991	-		Ga0059261_1158	0.86	-0.5
1,185,991	-		Ga0059261_1158	0.86	+0.3
1,185,991	-		Ga0059261_1158	0.86	+0.2
1,185,991	-		Ga0059261_1158	0.86	-0.4
1,185,991	-		Ga0059261_1158	0.86	-0.4
1,185,991	-		Ga0059261_1158	0.86	-0.3
1,185,991	-		Ga0059261_1158	0.86	+0.3
1,186,039	+		Ga0059261_1158	0.87	+0.4
1,186,039	+		Ga0059261_1158	0.87	+0.9
1,186,039	+		Ga0059261_1158	0.87	+0.4
1,186,039	+		Ga0059261_1158	0.87	-2.2
1,186,040	-				+0.9
1,186,040	-		Ga0059261_1158	0.88	+0.5
1,186,171	+				-0.1
1,186,171	+				-0.3
1,186,171	+				+0.5
1,186,171	+				+0.4
1,186,172	-				+0.4
1,186,172	-				-0.4
1,186,173	+				+0.6
1,186,173	+				+0.7
1,186,173	+				+0.1
1,186,173	+				+0.7
1,186,174	-				+0.2
1,186,192	+				-0.1
1,186,193	-				+0.6
1,186,193	-				-0.3
1,186,374	+				+0.3
1,186,374	+				+0.0
1,186,374	+				+0.9
1,186,374	+				+0.8
1,186,374	+				+1.0
1,186,374	+				-0.3
1,186,374	+				+0.4
1,186,375	-				-0.6
1,186,375	-				+1.9
1,186,375	-				+0.7
1,186,375	-				-1.2
1,186,375	-				+0.6
1,186,375	-				-0.2
1,186,448	+				+1.7
1,186,448	+				+0.2
1,186,449	-				-0.3
1,186,488	+				+0.4
1,186,489	-				+0.0
1,186,496	-				+0.8
1,186,543	-				-0.1
1,186,543	-				+0.1
1,186,620	-				+0.3
1,186,620	-				-0.2
1,186,744	+		Ga0059261_1159	0.11	+0.4
1,186,744	+		Ga0059261_1159	0.11	-0.2
1,186,744	+		Ga0059261_1159	0.11	+0.2
1,186,745	-		Ga0059261_1159	0.11	-0.8
1,186,745	-		Ga0059261_1159	0.11	+0.4
1,186,766	+		Ga0059261_1159	0.12	-0.4
1,186,766	+		Ga0059261_1159	0.12	+0.3
1,186,766	+		Ga0059261_1159	0.12	-1.5
1,186,767	-		Ga0059261_1159	0.12	+0.6
1,186,767	-		Ga0059261_1159	0.12	-0.1
1,186,767	-		Ga0059261_1159	0.12	+0.8
1,186,767	-		Ga0059261_1159	0.12	-0.6
1,186,767	-		Ga0059261_1159	0.12	+0.1
1,186,767	-		Ga0059261_1159	0.12	+0.3
1,186,783	+		Ga0059261_1159	0.13	+0.0
1,186,928	+		Ga0059261_1159	0.20	+0.4
1,186,928	+		Ga0059261_1159	0.20	+0.8
1,186,928	+		Ga0059261_1159	0.20	+0.0
1,186,928	+		Ga0059261_1159	0.20	+0.4
1,186,928	+		Ga0059261_1159	0.20	+0.2
1,186,928	+		Ga0059261_1159	0.20	+0.4
1,186,928	+		Ga0059261_1159	0.20	+0.1
1,186,928	+		Ga0059261_1159	0.20	+0.2
1,186,928	+		Ga0059261_1159	0.20	-0.2
1,186,928	+		Ga0059261_1159	0.20	+0.2
1,186,928	+		Ga0059261_1159	0.20	-0.2
1,186,929	-		Ga0059261_1159	0.21	+0.3
1,186,929	-		Ga0059261_1159	0.21	-0.3
1,186,929	-		Ga0059261_1159	0.21	-0.2
1,186,929	-		Ga0059261_1159	0.21	-1.5
1,186,937	+		Ga0059261_1159	0.21	+0.5
1,186,937	+		Ga0059261_1159	0.21	-0.0
1,186,938	-		Ga0059261_1159	0.21	+0.2
1,186,938	-		Ga0059261_1159	0.21	+0.3
1,186,938	-		Ga0059261_1159	0.21	-0.6
1,186,948	+		Ga0059261_1159	0.22	-0.7
1,186,948	+		Ga0059261_1159	0.22	+0.3
1,187,042	+		Ga0059261_1159	0.26	-1.1
1,187,043	-		Ga0059261_1159	0.26	+0.5
1,187,043	-		Ga0059261_1159	0.26	+0.3
1,187,164	+		Ga0059261_1159	0.33	-1.2
1,187,165	-		Ga0059261_1159	0.33	+0.2
1,187,318	+		Ga0059261_1159	0.41	-0.2
1,187,318	+		Ga0059261_1159	0.41	-0.2
1,187,318	+		Ga0059261_1159	0.41	+0.0
1,187,318	+		Ga0059261_1159	0.41	+0.7
1,187,319	-		Ga0059261_1159	0.41	-0.3
1,187,319	-		Ga0059261_1159	0.41	-1.8
1,187,467	+		Ga0059261_1159	0.49	-0.6
1,187,468	-				+0.6
1,187,490	-		Ga0059261_1159	0.50	+0.7
1,187,490	-		Ga0059261_1159	0.50	-0.2
1,188,036	+		Ga0059261_1159	0.78	-0.4
1,188,037	-		Ga0059261_1159	0.78	+1.6
1,188,037	-		Ga0059261_1159	0.78	-0.2
1,188,064	+		Ga0059261_1159	0.80	+0.9
1,188,148	+		Ga0059261_1159	0.84	-1.6
1,188,148	+		Ga0059261_1159	0.84	-0.0
1,188,148	+		Ga0059261_1159	0.84	-0.6
1,188,148	+		Ga0059261_1159	0.84	+0.9
1,188,148	+		Ga0059261_1159	0.84	-0.4
1,188,148	+		Ga0059261_1159	0.84	+0.4
1,188,149	-		Ga0059261_1159	0.84	+0.4
1,188,149	-		Ga0059261_1159	0.84	-0.1
1,188,152	+		Ga0059261_1159	0.84	-0.3
1,188,152	+		Ga0059261_1159	0.84	+0.5
1,188,152	+		Ga0059261_1159	0.84	-0.3
1,188,152	+		Ga0059261_1159	0.84	-0.4
1,188,152	+				+0.5
1,188,152	+		Ga0059261_1159	0.84	-0.3
1,188,153	-		Ga0059261_1159	0.84	-0.5
1,188,153	-		Ga0059261_1159	0.84	-0.1
1,188,153	-		Ga0059261_1159	0.84	+0.4
1,188,153	-		Ga0059261_1159	0.84	+0.9
1,188,153	-		Ga0059261_1159	0.84	+0.7
1,188,153	-		Ga0059261_1159	0.84	-0.2
1,188,153	-		Ga0059261_1159	0.84	-0.6
1,188,153	-		Ga0059261_1159	0.84	-0.2
1,188,200	+		Ga0059261_1159	0.87	+0.5
1,188,200	+		Ga0059261_1159	0.87	-0.9
1,188,200	+		Ga0059261_1159	0.87	+0.2
1,188,201	-		Ga0059261_1159	0.87	-0.0
1,188,201	-		Ga0059261_1159	0.87	-1.1
1,188,201	-		Ga0059261_1159	0.87	-0.4
1,188,285	-				-0.3
1,188,297	+				-0.3
1,188,297	+				+0.1
1,188,298	-				+0.5
1,188,380	+				-0.1
1,188,380	+				-0.3
1,188,380	+				+0.2
1,188,380	+				-0.6
1,188,380	+				+0.1
1,188,380	+				-0.2
1,188,380	+				+0.0
1,188,380	+				+0.0
1,188,380	+				-0.5
1,188,381	-				-0.2
1,188,574	+		Ga0059261_1160	0.27	+0.4
1,188,574	+		Ga0059261_1160	0.27	-0.7
1,188,619	+		Ga0059261_1160	0.37	-1.6
1,188,619	+		Ga0059261_1160	0.37	+0.2
1,188,619	+		Ga0059261_1160	0.37	+1.3
1,188,620	-		Ga0059261_1160	0.37	-0.3
1,188,620	-		Ga0059261_1160	0.37	-0.4
1,188,620	-		Ga0059261_1160	0.37	+0.5
1,188,620	-		Ga0059261_1160	0.37	+0.3
1,188,620	-		Ga0059261_1160	0.37	+0.6
1,188,620	-		Ga0059261_1160	0.37	-0.1
1,188,620	-		Ga0059261_1160	0.37	-0.2
1,188,621	+		Ga0059261_1160	0.38	-0.1
1,188,621	+		Ga0059261_1160	0.38	+1.4
1,188,621	+		Ga0059261_1160	0.38	-1.1
1,188,621	+				-0.1
1,188,621	+		Ga0059261_1160	0.38	-0.5
1,188,622	-		Ga0059261_1160	0.38	-0.3
1,188,622	-		Ga0059261_1160	0.38	-0.3
1,188,622	-		Ga0059261_1160	0.38	+0.1
1,188,622	-		Ga0059261_1160	0.38	-0.1
1,188,622	-		Ga0059261_1160	0.38	-0.8
1,188,622	-		Ga0059261_1160	0.38	+0.4
1,188,622	-		Ga0059261_1160	0.38	+0.2
1,188,772	+				+3.5
1,188,772	+		Ga0059261_1160	0.72	+0.3
1,188,772	+		Ga0059261_1160	0.72	+0.5
1,188,773	-		Ga0059261_1160	0.72	+0.1
1,188,773	-		Ga0059261_1160	0.72	+0.8
1,188,773	-		Ga0059261_1160	0.72	+0.7
1,188,774	+		Ga0059261_1160	0.72	-0.7
1,188,774	+		Ga0059261_1160	0.72	+0.3
1,188,774	+		Ga0059261_1160	0.72	-0.2
1,188,775	-		Ga0059261_1160	0.72	-0.0
1,188,775	-		Ga0059261_1160	0.72	+0.8
1,188,775	-		Ga0059261_1160	0.72	+0.3
1,188,775	-		Ga0059261_1160	0.72	-0.6
1,189,129	-		Ga0059261_1161	0.43	+0.6
1,189,299	-		Ga0059261_1161	0.77	+0.1
1,189,299	-		Ga0059261_1161	0.77	+0.4
1,189,299	-		Ga0059261_1161	0.77	+0.2
1,189,299	-		Ga0059261_1161	0.77	-1.5
1,189,299	-		Ga0059261_1161	0.77	-0.4
1,189,299	-		Ga0059261_1161	0.77	+0.9
1,189,307	+		Ga0059261_1161	0.79	-1.0
1,189,355	+		Ga0059261_1161	0.88	-0.1
1,189,355	+		Ga0059261_1161	0.88	-0.5
1,189,355	+		Ga0059261_1161	0.88	-0.5
1,189,356	-		Ga0059261_1161	0.88	-0.3
1,189,356	-		Ga0059261_1161	0.88	+0.3
1,189,356	-		Ga0059261_1161	0.88	+0.2
1,189,358	+		Ga0059261_1161	0.89	+0.1
1,189,359	-		Ga0059261_1161	0.89	-1.0
1,189,393	-				+0.3
1,189,393	-				-0.8