Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01020

Experiment: D-Salicin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Salicin (C)
1,102,350	-		CCNA_01019	0.60	+0.7
1,102,350	-		CCNA_01019	0.60	-0.3
1,102,350	-		CCNA_01019	0.60	+0.3
1,102,373	+		CCNA_01019	0.61	-2.1
1,102,406	+		CCNA_01019	0.62	+0.4
1,102,413	-		CCNA_01019	0.62	-3.3
1,102,414	-		CCNA_01019	0.62	-1.9
1,102,414	-		CCNA_01019	0.62	-2.9
1,102,438	-		CCNA_01019	0.64	-1.3
1,102,438	-		CCNA_01019	0.64	-1.6
1,102,440	-		CCNA_01019	0.64	-1.2
1,102,442	+		CCNA_01019	0.64	-2.1
1,102,442	+		CCNA_01019	0.64	-0.5
1,102,442	+		CCNA_01019	0.64	-0.8
1,102,442	+		CCNA_01019	0.64	-0.6
1,102,450	-		CCNA_01019	0.64	+0.2
1,102,468	+		CCNA_01019	0.65	-2.1
1,102,468	+		CCNA_01019	0.65	-0.1
1,102,468	+		CCNA_01019	0.65	-1.6
1,102,476	-		CCNA_01019	0.65	-0.8
1,102,489	+		CCNA_01019	0.66	-1.9
1,102,497	-		CCNA_01019	0.66	-0.8
1,102,497	-		CCNA_01019	0.66	-1.2
1,102,498	+		CCNA_01019	0.66	-2.5
1,102,504	-		CCNA_01019	0.66	-0.4
1,102,518	-		CCNA_01019	0.67	-1.8
1,102,591	+		CCNA_01019	0.70	-0.2
1,102,638	-		CCNA_01019	0.72	-1.0
1,102,662	+		CCNA_01019	0.73	+1.2
1,102,667	+		CCNA_01019	0.74	-1.7
1,102,667	+		CCNA_01019	0.74	+1.2
1,102,672	+		CCNA_01019	0.74	-1.5
1,102,675	-		CCNA_01019	0.74	-0.2
1,102,680	-		CCNA_01019	0.74	+0.1
1,102,766	-		CCNA_01019	0.78	-0.9
1,102,766	-		CCNA_01019	0.78	-2.7
1,102,766	-		CCNA_01019	0.78	+0.6
1,102,766	-		CCNA_01019	0.78	-1.7
1,102,811	-		CCNA_01019	0.80	-2.1
1,102,871	+		CCNA_01019	0.83	-2.9
1,102,872	-		CCNA_01019	0.83	+1.3
1,102,879	-		CCNA_01019	0.83	-1.5
1,102,879	-		CCNA_01019	0.83	-0.4
1,102,884	-		CCNA_01019	0.83	-1.1
1,102,884	-		CCNA_01019	0.83	-0.9
1,102,907	-		CCNA_01019	0.84	+0.4
1,102,912	+		CCNA_01019	0.84	-1.8
1,102,912	+		CCNA_01019	0.84	+0.8
1,102,912	+		CCNA_01019	0.84	-2.2
1,102,912	+		CCNA_01019	0.84	-1.3
1,102,912	+		CCNA_01019	0.84	-0.6
1,102,920	-		CCNA_01019	0.85	-0.9
1,102,920	-		CCNA_01019	0.85	-0.9
1,102,920	-		CCNA_01019	0.85	+0.2
1,102,942	+		CCNA_01019	0.86	-0.1
1,102,943	+		CCNA_01019	0.86	-2.9
1,102,951	-		CCNA_01019	0.86	-0.6
1,102,951	-		CCNA_01019	0.86	-0.1
1,102,951	-		CCNA_01019	0.86	+1.4
1,102,953	+		CCNA_01019	0.86	-1.2
1,102,968	+		CCNA_01019	0.87	-1.6
1,103,008	+		CCNA_01019	0.89	-1.7
1,103,016	-		CCNA_01019	0.89	-1.3
1,103,031	-		CCNA_01019	0.90	-0.3
1,103,041	-				-0.7
1,103,101	-				-0.6
1,103,101	-				-2.6
1,103,107	-				-2.4
1,103,187	+				-2.4
1,103,208	-				-2.1
1,103,224	+				-0.8
1,103,248	+				-0.4
1,103,261	+				+2.2
1,103,291	-				+0.2
1,103,336	+				+1.4
1,103,338	-				+2.2
1,103,359	+				+0.3
1,103,360	+				-0.0
1,103,367	-				+3.9
1,103,367	-				+5.0
1,103,368	-				+1.2
1,103,368	-				+1.2
1,103,396	-				+5.3
1,103,396	-				+5.3
1,103,430	-				+5.8
1,103,454	+		CCNA_01020	0.12	+0.4
1,103,461	+		CCNA_01020	0.12	-0.8
1,103,466	+		CCNA_01020	0.13	-0.4
1,103,469	-		CCNA_01020	0.13	+5.3
1,103,487	+		CCNA_01020	0.15	-1.9
1,103,495	-		CCNA_01020	0.16	+5.5
1,103,495	-		CCNA_01020	0.16	+4.6
1,103,495	-		CCNA_01020	0.16	+4.7
1,103,519	+		CCNA_01020	0.18	+1.1
1,103,522	-		CCNA_01020	0.18	+4.3
1,103,527	-		CCNA_01020	0.19	+4.1
1,103,532	-		CCNA_01020	0.19	+3.4
1,103,532	-		CCNA_01020	0.19	+3.6
1,103,581	+		CCNA_01020	0.24	-3.0
1,103,696	-		CCNA_01020	0.35	+2.1
1,103,711	+		CCNA_01020	0.36	+0.1
1,103,730	+		CCNA_01020	0.38	-1.6
1,103,738	-		CCNA_01020	0.39	+1.4
1,103,741	+		CCNA_01020	0.39	+1.2
1,103,741	+		CCNA_01020	0.39	-2.9
1,103,743	-		CCNA_01020	0.39	+3.4
1,103,834	+		CCNA_01020	0.48	-1.2
1,103,848	-		CCNA_01020	0.49	+6.0
1,103,850	+		CCNA_01020	0.50	+0.6
1,103,857	-		CCNA_01020	0.50	+4.4
1,103,963	-		CCNA_01020	0.60	+2.8
1,103,963	-		CCNA_01020	0.60	+1.7
1,103,963	-		CCNA_01020	0.60	+2.0
1,104,067	+		CCNA_01020	0.70	-1.7
1,104,080	+		CCNA_01020	0.72	-1.1
1,104,088	-		CCNA_01020	0.72	+2.4
1,104,098	-		CCNA_01020	0.73	+2.1
1,104,103	-		CCNA_01020	0.74	+3.5
1,104,110	-		CCNA_01020	0.75	+1.5
1,104,133	-		CCNA_01020	0.77	+3.5
1,104,195	+		CCNA_01020	0.83	-2.8
1,104,195	+		CCNA_01020	0.83	-3.0
1,104,196	+		CCNA_01020	0.83	+0.1
1,104,230	+		CCNA_01020	0.86	-3.3
1,104,249	+		CCNA_01020	0.88	-1.7
1,104,290	-				+0.7
1,104,290	-				+3.1
1,104,295	-				+4.7
1,104,298	+				-2.4
1,104,306	-				+3.5
1,104,306	-				+2.9
1,104,326	+				-2.8
1,104,334	-				+2.8
1,104,334	-				+5.9
1,104,378	-				-1.3
1,104,380	-				+1.0
1,104,391	+				-1.1
1,104,414	+				-0.3
1,104,424	-				-0.2
1,104,470	-				+1.1
1,104,858	+				+3.0
1,104,890	+				+0.6
1,104,890	+				-1.0
1,104,961	-				-0.6
1,105,008	+				+1.0
1,105,008	+				+1.9
1,105,008	+				+0.4
1,105,016	-				-2.6
1,105,016	-				-2.1
1,105,073	+				-2.9
1,105,101	+				-0.8
1,105,109	-				+0.1
1,105,118	-				-2.2
1,105,156	-				-0.4
1,105,163	+				-0.6
1,105,180	+				+0.1
1,105,198	-				+0.4
1,105,295	+				-1.6
1,105,303	-				-1.3
1,105,303	-				-0.4
1,105,311	+				-1.6
1,105,358	+		CCNA_01021	0.11	-1.8
1,105,365	+		CCNA_01021	0.11	-0.3
1,105,372	-		CCNA_01021	0.11	-2.4
1,105,373	-		CCNA_01021	0.11	+1.6
1,105,373	-		CCNA_01021	0.11	-2.1