Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24420

Experiment: R2A with Polymyxin B sulfate 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.016 mg/ml
5,946,874	+		CA265_RS24415	0.74	-0.4
5,946,875	-		CA265_RS24415	0.74	+2.0
5,946,951	-		CA265_RS24415	0.77	-1.0
5,946,974	+		CA265_RS24415	0.77	+0.8
5,946,975	-		CA265_RS24415	0.78	-1.2
5,946,975	-		CA265_RS24415	0.78	-0.4
5,946,978	+		CA265_RS24415	0.78	+2.3
5,947,187	-		CA265_RS24415	0.84	+0.1
5,947,229	+		CA265_RS24415	0.85	+0.3
5,947,282	-		CA265_RS24415	0.87	+0.2
5,947,357	+		CA265_RS24415	0.89	-0.0
5,947,385	+				-0.2
5,947,386	-				-0.8
5,947,409	-				+0.6
5,947,411	+				-0.7
5,947,419	+				+0.7
5,947,452	-				+0.8
5,947,467	-				-1.3
5,947,470	+				-0.4
5,947,489	+				+0.7
5,947,490	-				+0.4
5,947,508	-				+0.2
5,947,512	-				-1.2
5,947,562	-				+1.0
5,947,579	-				+0.2
5,947,593	-				+0.4
5,947,612	+				+0.1
5,947,613	-				-0.4
5,947,644	-				-0.2
5,947,649	-				-0.4
5,947,649	-				+0.5
5,947,672	+				+0.8
5,947,673	-				-0.3
5,947,673	-				+0.1
5,947,685	+				+0.2
5,947,686	-				+0.1
5,947,689	-				+0.1
5,947,689	-				+0.5
5,947,706	-				-0.1
5,947,721	+				+0.1
5,947,845	+				+0.5
5,947,861	+				+0.2
5,947,861	+				-0.9
5,947,861	+				-1.1
5,947,862	-				+0.4
5,947,915	+		CA265_RS24420	0.13	+0.0
5,947,916	-		CA265_RS24420	0.13	+0.5
5,947,957	-		CA265_RS24420	0.16	+2.6
5,947,961	+		CA265_RS24420	0.16	-0.0
5,947,972	+		CA265_RS24420	0.17	-2.3
5,948,152	+		CA265_RS24420	0.28	-0.3
5,948,260	-		CA265_RS24420	0.35	-0.8
5,948,304	+		CA265_RS24420	0.38	-0.4
5,948,305	-		CA265_RS24420	0.38	-0.8
5,948,315	+		CA265_RS24420	0.38	+0.6
5,948,315	+		CA265_RS24420	0.38	-1.8
5,948,570	-		CA265_RS24420	0.55	+1.5
5,948,572	-		CA265_RS24420	0.55	-1.3
5,948,784	+		CA265_RS24420	0.68	-0.1
5,948,784	+		CA265_RS24420	0.68	-1.0
5,948,945	-		CA265_RS24420	0.79	-0.4
5,948,945	-		CA265_RS24420	0.79	-2.7
5,948,951	+		CA265_RS24420	0.79	-1.2
5,948,951	+		CA265_RS24420	0.79	+2.0
5,948,952	-		CA265_RS24420	0.79	+1.0
5,948,999	-		CA265_RS24420	0.82	-0.2
5,948,999	-		CA265_RS24420	0.82	-0.5
5,948,999	-		CA265_RS24420	0.82	+0.4
5,948,999	-		CA265_RS24420	0.82	-0.7
5,949,132	+				-0.4
5,949,174	+				-0.8
5,949,175	-				-1.4
5,949,178	-				-0.6
5,949,218	+				-0.0
5,949,278	-				-0.0
5,949,425	+				+0.0
5,949,442	+				+0.1
5,949,564	-				+0.1
5,949,564	-				+0.2
5,949,643	-				-0.7
5,949,749	+				-0.9
5,949,767	+				-3.3
5,949,783	-				-0.2
5,949,910	-				+0.7
5,950,019	-				+0.1
5,950,094	+				-1.2
5,950,097	+				-1.0
5,950,260	-		CA265_RS24430	0.29	+0.3
5,950,272	+		CA265_RS24430	0.31	-1.0