Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS22055
Experiment: R2A with Polymyxin B sulfate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Polymyxin B sulfate 0.016 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,421,985 | + | CA265_RS22050 | 0.23 | +0.2 | |
5,422,086 | - | CA265_RS22050 | 0.40 | +1.0 | |
5,422,091 | - | CA265_RS22050 | 0.41 | +0.5 | |
5,422,124 | - | CA265_RS22050 | 0.46 | +0.4 | |
5,422,161 | - | CA265_RS22050 | 0.52 | -0.4 | |
5,422,167 | - | CA265_RS22050 | 0.53 | +0.6 | |
5,422,208 | + | CA265_RS22050 | 0.60 | -2.4 | |
5,422,209 | - | CA265_RS22050 | 0.60 | +1.4 | |
5,422,245 | + | CA265_RS22050 | 0.66 | -0.6 | |
5,422,253 | - | CA265_RS22050 | 0.67 | +1.2 | |
5,422,279 | - | CA265_RS22050 | 0.72 | -0.0 | |
5,422,318 | - | CA265_RS22050 | 0.78 | +0.7 | |
5,422,351 | - | CA265_RS22050 | 0.83 | -0.3 | |
5,422,391 | - | +0.2 | |||
5,422,411 | - | +0.6 | |||
5,422,414 | + | -2.5 | |||
5,422,466 | + | +0.7 | |||
5,422,467 | - | +0.6 | |||
5,422,507 | + | -2.0 | |||
5,422,554 | + | -1.0 | |||
5,422,665 | - | +0.4 | |||
5,422,668 | + | +0.4 | |||
5,422,669 | - | -0.0 | |||
5,422,709 | + | -1.5 | |||
5,422,782 | + | +0.4 | |||
5,422,785 | - | +0.4 | |||
5,422,785 | - | +0.3 | |||
5,422,827 | + | -0.7 | |||
5,422,841 | + | -0.2 | |||
5,424,257 | + | -0.1 | |||
5,424,258 | - | -0.6 | |||
5,424,259 | + | -0.7 |
Or see this region's nucleotide sequence