Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15725

Experiment: R2A with Polymyxin B sulfate 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.016 mg/ml
3,963,197	+		CA265_RS15715	0.72	-1.3
3,963,245	-		CA265_RS15715	0.76	-0.0
3,963,298	+		CA265_RS15715	0.80	-0.4
3,963,444	+				-1.4
3,963,444	+				+0.6
3,963,445	-				+0.9
3,963,475	+				-0.1
3,963,534	-				+0.6
3,963,592	+				-1.0
3,963,611	+				+1.1
3,963,612	-				-0.5
3,963,613	+				+0.8
3,963,614	-				-0.4
3,963,736	+		CA265_RS15720	0.26	+0.2
3,963,800	+		CA265_RS15720	0.43	-1.4
3,963,846	+		CA265_RS15720	0.55	+1.6
3,963,847	-		CA265_RS15720	0.55	-0.8
3,963,859	+		CA265_RS15720	0.58	-1.6
3,963,860	-		CA265_RS15720	0.58	-0.4
3,963,891	-		CA265_RS15720	0.66	-1.3
3,963,917	-				+0.1
3,963,987	+				-0.9
3,963,987	+				-0.9
3,964,097	-				+1.1
3,964,126	+				-0.6
3,964,194	-		CA265_RS15725	0.17	-0.1
3,964,232	+		CA265_RS15725	0.27	+1.6
3,964,237	-		CA265_RS15725	0.29	-0.1
3,964,237	-		CA265_RS15725	0.29	-0.7
3,964,327	+		CA265_RS15725	0.53	-0.9
3,964,358	+		CA265_RS15725	0.62	+0.0
3,964,377	+		CA265_RS15725	0.67	-0.7
3,964,378	-		CA265_RS15725	0.67	+1.2
3,964,378	-		CA265_RS15725	0.67	-0.4
3,964,378	-		CA265_RS15725	0.67	+0.6
3,964,410	+		CA265_RS15725	0.76	-1.8
3,964,410	+		CA265_RS15725	0.76	-1.8
3,964,411	-		CA265_RS15725	0.76	-0.2
3,964,501	+				-1.1
3,964,599	-				-0.3
3,964,712	+		CA265_RS15730	0.15	-2.1
3,964,716	+		CA265_RS15730	0.15	-0.7
3,964,785	-		CA265_RS15730	0.25	-2.8
3,964,827	+		CA265_RS15730	0.30	-0.9
3,964,922	-		CA265_RS15730	0.43	-2.3
3,964,951	+		CA265_RS15730	0.47	-0.7
3,964,987	-		CA265_RS15730	0.52	-0.4
3,964,987	-		CA265_RS15730	0.52	+0.1
3,965,012	+		CA265_RS15730	0.55	-1.4
3,965,090	+		CA265_RS15730	0.65	-0.5
3,965,090	+		CA265_RS15730	0.65	+0.5
3,965,090	+		CA265_RS15730	0.65	+0.2
3,965,090	+		CA265_RS15730	0.65	+0.5
3,965,091	-		CA265_RS15730	0.66	-0.7
3,965,091	-		CA265_RS15730	0.66	+0.4
3,965,091	-		CA265_RS15730	0.66	+0.5
3,965,093	-		CA265_RS15730	0.66	+1.3
3,965,251	-		CA265_RS15730	0.87	+0.2
3,965,328	+				-0.2
3,965,345	+				+0.3
3,965,349	+				+0.2
3,965,357	+				-0.4
3,965,358	-				-0.2
3,965,363	-				+0.0
3,965,363	-				-0.8
3,965,419	-				-0.2
3,965,439	-				+1.4