Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13280

Experiment: R2A with Polymyxin B sulfate 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.016 mg/ml
3,297,704	+		CA265_RS13275	0.44	-1.1
3,297,704	+		CA265_RS13275	0.44	+0.0
3,297,745	+		CA265_RS13275	0.48	-1.8
3,297,812	-		CA265_RS13275	0.54	-0.6
3,297,830	+		CA265_RS13275	0.56	-1.5
3,297,831	-		CA265_RS13275	0.56	-0.8
3,297,886	-		CA265_RS13275	0.61	-0.2
3,297,967	+		CA265_RS13275	0.68	-2.1
3,297,972	-		CA265_RS13275	0.68	-1.2
3,298,049	-		CA265_RS13275	0.75	-1.5
3,298,071	-		CA265_RS13275	0.77	-0.8
3,298,215	+				-1.2
3,298,216	-				+0.3
3,298,216	-				+1.5
3,298,217	-				-0.4
3,298,252	-				-2.7
3,298,257	+				+0.0
3,298,258	-				-0.8
3,298,258	-				-1.6
3,298,275	+				+0.2
3,298,430	+				+0.6
3,298,573	+				+0.4
3,298,574	-				-0.0
3,298,583	+				-3.4
3,298,583	+				-0.7
3,298,587	+				-1.3
3,298,587	+				-0.1
3,298,588	-				+0.1
3,298,635	+				-1.9
3,298,635	+				+1.2
3,298,668	+				+0.9
3,298,669	-				-1.7
3,298,675	+				-0.5
3,298,682	+				+0.0
3,298,683	-				-0.6
3,298,698	-				+0.5
3,298,711	+				+0.7
3,298,757	-		CA265_RS13280	0.12	-0.1
3,298,799	+		CA265_RS13280	0.19	-0.5
3,298,799	+		CA265_RS13280	0.19	-0.5
3,298,800	-		CA265_RS13280	0.19	-0.9
3,298,800	-		CA265_RS13280	0.19	-1.2
3,298,800	-		CA265_RS13280	0.19	-0.7
3,298,986	+		CA265_RS13280	0.50	+0.3
3,298,988	+		CA265_RS13280	0.50	-2.6
3,298,989	-		CA265_RS13280	0.50	+0.5
3,298,989	-		CA265_RS13280	0.50	-0.2
3,299,103	+		CA265_RS13280	0.69	+0.6
3,299,129	-		CA265_RS13280	0.73	-0.8
3,299,144	+		CA265_RS13280	0.75	-0.7
3,299,144	+		CA265_RS13280	0.75	+0.5
3,299,145	-		CA265_RS13280	0.75	-1.1
3,299,145	-		CA265_RS13280	0.75	-0.5
3,299,145	-		CA265_RS13280	0.75	-2.9
3,299,149	-		CA265_RS13280	0.76	-0.4
3,299,158	-		CA265_RS13280	0.78	-0.7
3,299,281	-				-0.9
3,299,446	-		CA265_RS13285	0.10	-0.4
3,299,455	+		CA265_RS13285	0.11	-1.2
3,299,499	+		CA265_RS13285	0.14	-0.6
3,299,535	+		CA265_RS13285	0.17	+0.6
3,299,535	+		CA265_RS13285	0.17	-0.6
3,299,591	-		CA265_RS13285	0.21	-1.5
3,299,613	+		CA265_RS13285	0.22	+1.0
3,299,614	-		CA265_RS13285	0.22	-0.4
3,299,654	-		CA265_RS13285	0.25	-3.0
3,299,706	+		CA265_RS13285	0.29	-0.8
3,299,750	-		CA265_RS13285	0.32	-1.2
3,299,754	+		CA265_RS13285	0.33	+0.3
3,299,876	+		CA265_RS13285	0.41	-0.4
3,299,926	-		CA265_RS13285	0.45	-0.4
3,299,974	+		CA265_RS13285	0.49	-0.5
3,300,067	+		CA265_RS13285	0.55	+1.3
3,300,144	+		CA265_RS13285	0.61	+0.2
3,300,145	-		CA265_RS13285	0.61	-1.8
3,300,157	+		CA265_RS13285	0.62	-0.0
3,300,169	-		CA265_RS13285	0.63	-3.0
3,300,179	+		CA265_RS13285	0.63	-0.7
3,300,180	-		CA265_RS13285	0.64	-0.3
3,300,180	-		CA265_RS13285	0.64	-0.8
3,300,180	-		CA265_RS13285	0.64	-0.2
3,300,243	+		CA265_RS13285	0.68	-0.2
3,300,268	-		CA265_RS13285	0.70	-0.1
3,300,294	+		CA265_RS13285	0.72	+0.4