Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11045

Experiment: R2A with Polymyxin B sulfate 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.016 mg/ml
2,710,134	-				-0.1
2,710,211	-				-0.0
2,710,228	-				+0.0
2,710,284	-				-0.3
2,710,304	+				+0.8
2,710,348	+				+0.0
2,710,348	+				+0.2
2,710,407	+				-0.1
2,710,413	+				-0.7
2,710,424	+				-0.7
2,710,426	+				+0.3
2,710,427	-				-0.4
2,710,461	+				-0.1
2,710,462	-				+0.5
2,710,462	-				-1.0
2,710,504	+		CA265_RS11040	0.12	+0.7
2,710,573	-		CA265_RS11040	0.22	-0.6
2,710,573	-		CA265_RS11040	0.22	-1.8
2,710,647	-		CA265_RS11040	0.34	-0.0
2,710,649	-		CA265_RS11040	0.34	-0.1
2,710,679	+		CA265_RS11040	0.39	-0.2
2,710,680	-		CA265_RS11040	0.39	-0.9
2,710,680	-		CA265_RS11040	0.39	+0.1
2,710,685	+		CA265_RS11040	0.39	-1.5
2,710,724	+		CA265_RS11040	0.45	-1.2
2,710,725	-		CA265_RS11040	0.46	+0.4
2,710,756	+		CA265_RS11040	0.50	+0.4
2,710,813	+		CA265_RS11040	0.59	-1.0
2,710,827	+		CA265_RS11040	0.61	-0.2
2,710,832	-		CA265_RS11040	0.62	+0.2
2,710,865	-		CA265_RS11040	0.67	+0.6
2,711,014	+		CA265_RS11040	0.90	-0.9
2,711,079	-				+0.2
2,711,114	+				-0.2
2,711,120	+				-0.4
2,711,172	+				+0.0
2,711,175	-				-0.6
2,711,175	-				+0.2
2,711,178	-				+0.3
2,711,228	-		CA265_RS11045	0.11	-1.2
2,711,255	+		CA265_RS11045	0.13	-0.5
2,711,321	+		CA265_RS11045	0.18	-0.6
2,711,337	+		CA265_RS11045	0.19	+0.3
2,711,341	+		CA265_RS11045	0.19	-0.0
2,711,582	-		CA265_RS11045	0.38	+0.1
2,711,631	-		CA265_RS11045	0.42	-1.1
2,711,634	+		CA265_RS11045	0.42	-1.9
2,711,635	-		CA265_RS11045	0.42	+0.0
2,711,676	+		CA265_RS11045	0.45	-0.9
2,711,751	+		CA265_RS11045	0.51	+0.5
2,711,752	-		CA265_RS11045	0.51	+0.2
2,711,752	-		CA265_RS11045	0.51	-0.6
2,711,807	-		CA265_RS11045	0.55	-0.7
2,711,914	+		CA265_RS11045	0.64	-0.3
2,711,991	-		CA265_RS11045	0.70	-0.5
2,712,047	-		CA265_RS11045	0.74	+1.1
2,712,071	-		CA265_RS11045	0.76	+0.8
2,712,132	+		CA265_RS11045	0.80	-0.4
2,712,177	+		CA265_RS11045	0.84	+0.5
2,712,177	+		CA265_RS11045	0.84	-0.1
2,712,177	+		CA265_RS11045	0.84	-0.4
2,712,177	+		CA265_RS11045	0.84	+0.4
2,712,178	-		CA265_RS11045	0.84	+1.1
2,712,179	+		CA265_RS11045	0.84	+0.4
2,712,186	-		CA265_RS11045	0.85	-0.6
2,712,229	-		CA265_RS11045	0.88	-0.2
2,712,229	-		CA265_RS11045	0.88	-0.1
2,712,230	+		CA265_RS11045	0.88	+0.5
2,712,231	-		CA265_RS11045	0.88	-0.2
2,712,234	+		CA265_RS11045	0.88	-0.8
2,712,234	+		CA265_RS11045	0.88	+0.2
2,712,235	-		CA265_RS11045	0.88	-0.2
2,712,327	-				-0.3
2,712,335	-				-0.2
2,712,335	-				+0.9
2,712,382	+				-0.2
2,712,391	+				-0.6
2,712,392	-				-0.2
2,712,434	+				+0.3
2,712,467	+				-0.3
2,712,468	-				-0.6
2,712,513	+				-1.6
2,712,516	-				+0.7
2,712,525	+				+0.4
2,712,537	-				+0.8
2,712,570	-				+0.2
2,712,595	+				+0.2
2,712,598	-				+0.8
2,712,726	+		CA265_RS11050	0.16	-0.0
2,712,761	+		CA265_RS11050	0.26	-0.0
2,712,794	+		CA265_RS11050	0.35	+0.3
2,712,795	-		CA265_RS11050	0.36	-1.5
2,712,795	-		CA265_RS11050	0.36	-0.2
2,712,820	+		CA265_RS11050	0.43	+0.4
2,712,873	-		CA265_RS11050	0.57	+1.7
2,712,908	-		CA265_RS11050	0.67	+0.6
2,712,908	-		CA265_RS11050	0.67	-0.5
2,712,908	-		CA265_RS11050	0.67	+0.6
2,712,974	+		CA265_RS11050	0.86	-2.4
2,713,008	-				+0.3
2,713,108	+				-0.1
2,713,157	-				+0.1
2,713,157	-				+0.4
2,713,216	+				+0.7
2,713,229	-				-0.4
2,713,274	-				-0.0
2,713,362	+		CA265_RS11055	0.11	+1.0
2,713,362	+		CA265_RS11055	0.11	-0.5
2,713,366	-		CA265_RS11055	0.12	+1.2