Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11035

Experiment: R2A with Polymyxin B sulfate 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.016 mg/ml
2,708,400	-				-0.8
2,708,400	-				+0.7
2,708,400	-				+0.4
2,708,400	-				-0.3
2,708,423	-				-0.6
2,708,581	+				+0.1
2,708,582	-				+0.5
2,708,675	+				+0.1
2,708,704	-				+0.5
2,708,771	-				-0.3
2,708,860	+		CA265_RS11025	0.39	-0.2
2,708,861	-		CA265_RS11025	0.39	-0.7
2,708,910	-		CA265_RS11025	0.62	-1.2
2,709,048	+				+0.7
2,709,049	-				-0.9
2,709,053	-				-0.0
2,709,162	-		CA265_RS11030	0.82	-0.7
2,709,187	+				+0.2
2,709,187	+				+0.3
2,709,195	+				-0.1
2,709,196	-				-0.4
2,709,207	+				+1.3
2,709,207	+				-0.1
2,709,209	+				+0.3
2,709,294	+				-0.7
2,709,295	-				+0.2
2,709,318	+				+0.2
2,709,408	-				-0.8
2,709,464	-		CA265_RS11035	0.14	+0.0
2,709,522	+		CA265_RS11035	0.20	+1.8
2,709,580	-		CA265_RS11035	0.27	-1.6
2,709,584	+		CA265_RS11035	0.28	+0.0
2,709,597	-		CA265_RS11035	0.29	-1.7
2,709,602	+		CA265_RS11035	0.30	+1.1
2,709,602	+		CA265_RS11035	0.30	-0.6
2,709,602	+		CA265_RS11035	0.30	+0.2
2,709,603	-		CA265_RS11035	0.30	-0.6
2,709,603	-		CA265_RS11035	0.30	-0.9
2,709,839	-		CA265_RS11035	0.57	-0.8
2,709,856	-		CA265_RS11035	0.59	-0.7
2,709,856	-		CA265_RS11035	0.59	+2.1
2,709,908	-		CA265_RS11035	0.65	+0.2
2,709,921	-		CA265_RS11035	0.67	-0.8
2,709,968	+		CA265_RS11035	0.73	+0.2
2,710,011	+		CA265_RS11035	0.78	+0.4
2,710,011	+		CA265_RS11035	0.78	-0.0
2,710,134	-				-0.1
2,710,211	-				-0.0
2,710,228	-				+0.0
2,710,284	-				-0.3
2,710,304	+				+0.8
2,710,348	+				+0.0
2,710,348	+				+0.2
2,710,407	+				-0.1
2,710,413	+				-0.7
2,710,424	+				-0.7
2,710,426	+				+0.3
2,710,427	-				-0.4
2,710,461	+				-0.1
2,710,462	-				+0.5
2,710,462	-				-1.0
2,710,504	+		CA265_RS11040	0.12	+0.7
2,710,573	-		CA265_RS11040	0.22	-0.6
2,710,573	-		CA265_RS11040	0.22	-1.8
2,710,647	-		CA265_RS11040	0.34	-0.0
2,710,649	-		CA265_RS11040	0.34	-0.1
2,710,679	+		CA265_RS11040	0.39	-0.2
2,710,680	-		CA265_RS11040	0.39	-0.9
2,710,680	-		CA265_RS11040	0.39	+0.1
2,710,685	+		CA265_RS11040	0.39	-1.5
2,710,724	+		CA265_RS11040	0.45	-1.2
2,710,725	-		CA265_RS11040	0.46	+0.4
2,710,756	+		CA265_RS11040	0.50	+0.4
2,710,813	+		CA265_RS11040	0.59	-1.0
2,710,827	+		CA265_RS11040	0.61	-0.2
2,710,832	-		CA265_RS11040	0.62	+0.2
2,710,865	-		CA265_RS11040	0.67	+0.6
2,711,014	+		CA265_RS11040	0.90	-0.9
2,711,079	-				+0.2
2,711,114	+				-0.2
2,711,120	+				-0.4
2,711,172	+				+0.0
2,711,175	-				-0.6
2,711,175	-				+0.2
2,711,178	-				+0.3