Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05700

Experiment: R2A with Polymyxin B sulfate 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.016 mg/ml
1,384,892	-				-0.1
1,384,914	-				-0.2
1,384,918	+				-1.7
1,384,918	+				-1.2
1,384,996	+				-1.0
1,384,997	-				+0.4
1,385,084	+				-0.9
1,385,094	+				-1.1
1,385,098	-				+0.2
1,385,177	+				-0.9
1,385,178	-				+0.2
1,385,199	+				-1.0
1,385,217	+				-2.0
1,385,348	+				-1.8
1,385,365	+				-1.7
1,385,396	+				-2.0
1,385,449	+				-0.2
1,385,450	-				-0.8
1,385,499	-				+0.3
1,385,520	-				+0.1
1,385,525	+				-1.9
1,385,526	-				+0.2
1,385,526	-				+1.4
1,385,558	+				-2.5
1,385,649	-				+0.5
1,385,682	-				+0.6
1,385,682	-				+0.1
1,385,682	-				+0.6
1,385,724	+				-0.1
1,385,918	-				-0.6
1,385,954	+		CA265_RS05700	0.13	-1.7
1,385,954	+		CA265_RS05700	0.13	-0.8
1,385,954	+		CA265_RS05700	0.13	-1.5
1,385,969	+		CA265_RS05700	0.15	-0.2
1,385,970	-		CA265_RS05700	0.15	+0.1
1,386,026	+		CA265_RS05700	0.21	-2.6
1,386,041	-		CA265_RS05700	0.23	+0.8
1,386,041	-				+0.2
1,386,081	-		CA265_RS05700	0.27	+0.5
1,386,139	+		CA265_RS05700	0.33	-3.2
1,386,140	-		CA265_RS05700	0.34	+2.0
1,386,146	-		CA265_RS05700	0.34	+1.0
1,386,167	-		CA265_RS05700	0.36	-0.2
1,386,167	-		CA265_RS05700	0.36	-0.4
1,386,167	-		CA265_RS05700	0.36	-0.0
1,386,274	+		CA265_RS05700	0.48	-1.4
1,386,300	+		CA265_RS05700	0.51	-1.2
1,386,305	+		CA265_RS05700	0.52	-1.1
1,386,306	-		CA265_RS05700	0.52	-0.3
1,386,311	-		CA265_RS05700	0.52	+0.2
1,386,338	+		CA265_RS05700	0.55	-0.7
1,386,349	+		CA265_RS05700	0.56	+0.2
1,386,427	+		CA265_RS05700	0.65	-1.3
1,386,503	-		CA265_RS05700	0.73	+0.2
1,386,565	+		CA265_RS05700	0.80	-1.3
1,386,566	-		CA265_RS05700	0.80	+0.2
1,386,579	-		CA265_RS05700	0.81	+0.2
1,386,592	-		CA265_RS05700	0.83	+0.2
1,386,592	-		CA265_RS05700	0.83	+0.6
1,386,593	+		CA265_RS05700	0.83	-0.9
1,386,594	-		CA265_RS05700	0.83	+1.0
1,386,602	-		CA265_RS05700	0.84	+0.5
1,386,610	+		CA265_RS05700	0.85	-1.0
1,386,735	-				+1.0
1,386,745	+				-3.3
1,386,748	-				+0.9
1,386,791	-				+0.5
1,386,795	-				-1.0
1,386,795	-				+0.8
1,386,797	-				+0.3
1,386,799	-				+0.2
1,386,799	-				-1.7
1,386,799	-				-0.6
1,386,799	-				+0.9
1,386,900	+				-2.6
1,386,931	+		CA265_RS05705	0.11	-3.6
1,387,044	+		CA265_RS05705	0.18	-0.8
1,387,092	+		CA265_RS05705	0.21	+0.6
1,387,093	-		CA265_RS05705	0.21	-0.6
1,387,135	+		CA265_RS05705	0.23	-1.2
1,387,136	-		CA265_RS05705	0.23	+1.2
1,387,181	-		CA265_RS05705	0.26	+0.6
1,387,181	-		CA265_RS05705	0.26	-0.4
1,387,231	+		CA265_RS05705	0.29	-3.0
1,387,360	+		CA265_RS05705	0.38	-0.4
1,387,475	-		CA265_RS05705	0.45	+0.6
1,387,503	+		CA265_RS05705	0.47	-2.5
1,387,535	-		CA265_RS05705	0.49	+0.4