Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04465

Experiment: R2A with Polymyxin B sulfate 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.016 mg/ml
1,067,324	+		CA265_RS04455	0.59	+0.7
1,067,332	+		CA265_RS04455	0.60	+0.4
1,067,419	-		CA265_RS04455	0.66	+0.7
1,067,419	-		CA265_RS04455	0.66	-0.1
1,067,425	-		CA265_RS04455	0.67	+0.0
1,067,460	+		CA265_RS04455	0.69	-0.5
1,067,488	-		CA265_RS04455	0.72	+0.1
1,067,584	-		CA265_RS04455	0.79	+0.5
1,067,584	-		CA265_RS04455	0.79	+0.0
1,067,588	-		CA265_RS04455	0.79	-0.4
1,067,591	-		CA265_RS04455	0.80	+0.8
1,067,607	+		CA265_RS04455	0.81	+0.0
1,067,651	+		CA265_RS04455	0.84	-0.1
1,067,651	+		CA265_RS04455	0.84	-0.2
1,067,652	-		CA265_RS04455	0.84	-0.8
1,067,655	-		CA265_RS04455	0.85	+0.1
1,067,655	-		CA265_RS04455	0.85	+0.1
1,067,657	-		CA265_RS04455	0.85	+0.1
1,067,812	-				+0.6
1,067,812	-				-1.4
1,067,812	-				+0.1
1,067,888	-				-0.6
1,067,898	+				-0.9
1,067,898	+				-0.5
1,067,924	-				-1.0
1,067,977	+		CA265_RS04460	0.34	-1.2
1,067,984	+		CA265_RS04460	0.37	-0.1
1,067,985	-		CA265_RS04460	0.38	-0.9
1,068,011	+		CA265_RS04460	0.50	-0.6
1,068,087	-		CA265_RS04460	0.85	-0.2
1,068,135	+				+0.0
1,068,154	-				-0.6
1,068,228	+				+0.2
1,068,242	-				+0.7
1,068,273	-		CA265_RS04465	0.10	+1.0
1,068,302	-		CA265_RS04465	0.23	+0.6
1,068,305	+		CA265_RS04465	0.25	+0.5
1,068,317	-		CA265_RS04465	0.30	+0.8
1,068,359	+		CA265_RS04465	0.49	-0.5
1,068,394	-		CA265_RS04465	0.65	-0.4
1,068,435	-		CA265_RS04465	0.84	+0.9
1,068,435	-				-1.3
1,068,459	+				+0.7
1,068,686	+		CA265_RS04470	0.20	+0.6
1,068,686	+		CA265_RS04470	0.20	+0.0
1,068,686	+		CA265_RS04470	0.20	-0.4
1,068,720	+		CA265_RS04470	0.26	-0.2
1,068,762	+		CA265_RS04470	0.32	+0.2
1,068,762	+		CA265_RS04470	0.32	-0.1
1,068,779	+		CA265_RS04470	0.35	-2.0
1,068,789	-		CA265_RS04470	0.36	+0.5
1,068,879	-		CA265_RS04470	0.50	+0.1
1,068,902	-		CA265_RS04470	0.53	-0.7
1,068,950	+		CA265_RS04470	0.61	+0.1
1,069,047	+		CA265_RS04470	0.75	-0.1
1,069,048	-		CA265_RS04470	0.75	+0.1
1,069,076	-		CA265_RS04470	0.80	+0.7
1,069,087	-		CA265_RS04470	0.81	+0.3
1,069,089	+		CA265_RS04470	0.82	-0.2
1,069,090	-		CA265_RS04470	0.82	+0.4
1,069,118	+		CA265_RS04470	0.86	-0.4
1,069,156	-				-0.2
1,069,211	+				+0.1
1,069,211	+				-0.7
1,069,212	-				+0.6
1,069,275	-				+0.0
1,069,276	+				-0.6
1,069,276	+				-1.1
1,069,276	+				-0.3
1,069,276	+				-0.2
1,069,332	-				+1.5
1,069,415	+				+0.0
1,069,415	+				+0.0