Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS18745 and ABIE51_RS18750 are separated by 74 nucleotides ABIE51_RS18750 and ABIE51_RS18755 are separated by 183 nucleotides ABIE51_RS18755 and ABIE51_RS18760 are separated by 312 nucleotides
ABIE51_RS18745: ABIE51_RS18745 - hypothetical protein, at 4,076,985 to 4,078,172
_RS18745
ABIE51_RS18750: ABIE51_RS18750 - lysozyme inhibitor LprI family protein, at 4,078,247 to 4,078,564
_RS18750
ABIE51_RS18755: ABIE51_RS18755 - hypothetical protein, at 4,078,748 to 4,079,224
_RS18755
ABIE51_RS18760: ABIE51_RS18760 - hypothetical protein, at 4,079,537 to 4,079,779
_RS18760
Position (kb)
4078
4079
4080 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4077.772 kb on - strand, within ABIE51_RS18745 at 4077.867 kb on + strand, within ABIE51_RS18745 at 4077.867 kb on + strand, within ABIE51_RS18745 at 4077.867 kb on + strand, within ABIE51_RS18745 at 4077.867 kb on + strand, within ABIE51_RS18745 at 4077.867 kb on + strand, within ABIE51_RS18745 at 4077.889 kb on + strand, within ABIE51_RS18745 at 4077.914 kb on + strand, within ABIE51_RS18745 at 4077.914 kb on + strand, within ABIE51_RS18745 at 4077.914 kb on + strand, within ABIE51_RS18745 at 4078.114 kb on + strand at 4078.115 kb on - strand at 4078.115 kb on - strand at 4078.115 kb on - strand at 4078.134 kb on + strand at 4078.134 kb on + strand at 4078.134 kb on + strand at 4078.134 kb on + strand at 4078.134 kb on + strand at 4078.134 kb on + strand at 4078.134 kb on + strand at 4078.135 kb on - strand at 4078.220 kb on - strand at 4078.268 kb on + strand at 4078.268 kb on + strand at 4078.322 kb on + strand, within ABIE51_RS18750 at 4078.322 kb on + strand, within ABIE51_RS18750 at 4078.322 kb on + strand, within ABIE51_RS18750 at 4078.323 kb on - strand, within ABIE51_RS18750 at 4078.356 kb on - strand, within ABIE51_RS18750 at 4078.383 kb on + strand, within ABIE51_RS18750 at 4078.384 kb on - strand, within ABIE51_RS18750 at 4078.384 kb on - strand, within ABIE51_RS18750 at 4078.535 kb on + strand at 4078.535 kb on + strand at 4078.535 kb on + strand at 4078.536 kb on - strand at 4078.536 kb on - strand at 4078.562 kb on + strand at 4078.562 kb on + strand at 4078.575 kb on + strand at 4078.575 kb on + strand at 4078.743 kb on + strand at 4078.743 kb on + strand at 4078.743 kb on + strand at 4078.743 kb on + strand at 4078.744 kb on - strand at 4078.744 kb on - strand at 4078.744 kb on - strand at 4078.744 kb on - strand at 4078.744 kb on - strand at 4079.102 kb on + strand, within ABIE51_RS18755 at 4079.103 kb on - strand, within ABIE51_RS18755 at 4079.118 kb on + strand, within ABIE51_RS18755 at 4079.539 kb on - strand at 4079.539 kb on - strand at 4079.539 kb on - strand at 4079.580 kb on + strand, within ABIE51_RS18760 at 4079.581 kb on - strand, within ABIE51_RS18760 at 4079.581 kb on - strand, within ABIE51_RS18760 at 4079.856 kb on + strand at 4079.856 kb on + strand at 4079.856 kb on + strand at 4079.856 kb on + strand at 4079.870 kb on + strand at 4079.870 kb on + strand at 4079.871 kb on - strand at 4079.892 kb on + strand at 4079.892 kb on + strand at 4079.892 kb on + strand at 4079.892 kb on + strand at 4079.892 kb on + strand at 4079.892 kb on + strand at 4079.893 kb on - strand at 4079.948 kb on + strand at 4079.984 kb on + strand at 4079.984 kb on + strand at 4079.985 kb on - strand at 4080.057 kb on + strand at 4080.057 kb on + strand at 4080.057 kb on + strand at 4080.057 kb on + strand at 4080.058 kb on - strand at 4080.058 kb on - strand at 4080.058 kb on - strand at 4080.067 kb on + strand at 4080.067 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.083 kb on + strand at 4080.084 kb on - strand at 4080.084 kb on - strand at 4080.084 kb on - strand at 4080.084 kb on - strand at 4080.084 kb on - strand at 4080.084 kb on - strand at 4080.084 kb on - strand at 4080.084 kb on - strand at 4080.084 kb on - strand at 4080.087 kb on + strand at 4080.087 kb on + strand at 4080.087 kb on + strand at 4080.087 kb on + strand at 4080.087 kb on + strand at 4080.087 kb on + strand at 4080.087 kb on + strand at 4080.087 kb on + strand at 4080.087 kb on + strand at 4080.087 kb on + strand at 4080.088 kb on - strand at 4080.088 kb on - strand at 4080.088 kb on - strand at 4080.088 kb on - strand at 4080.088 kb on - strand at 4080.088 kb on - strand at 4080.088 kb on - strand at 4080.088 kb on - strand at 4080.088 kb on - strand at 4080.088 kb on - strand at 4080.108 kb on + strand at 4080.109 kb on - strand at 4080.160 kb on + strand at 4080.160 kb on + strand at 4080.160 kb on + strand at 4080.161 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,077,772 - ABIE51_RS18745 0.66 -0.6 4,077,867 + ABIE51_RS18745 0.74 -1.6 4,077,867 + ABIE51_RS18745 0.74 +0.0 4,077,867 + ABIE51_RS18745 0.74 -0.3 4,077,867 + ABIE51_RS18745 0.74 -0.0 4,077,867 + ABIE51_RS18745 0.74 +0.1 4,077,889 + ABIE51_RS18745 0.76 -0.8 4,077,914 + ABIE51_RS18745 0.78 -0.2 4,077,914 + ABIE51_RS18745 0.78 -0.2 4,077,914 + ABIE51_RS18745 0.78 +0.1 4,078,114 + -0.5 4,078,115 - -0.2 4,078,115 - -0.1 4,078,115 - +0.8 4,078,134 + -0.1 4,078,134 + -0.8 4,078,134 + +0.2 4,078,134 + +0.1 4,078,134 + +0.2 4,078,134 + -0.2 4,078,134 + -1.0 4,078,135 - +0.3 4,078,220 - -0.0 4,078,268 + +0.7 4,078,268 + -0.4 4,078,322 + ABIE51_RS18750 0.24 +0.1 4,078,322 + ABIE51_RS18750 0.24 +2.0 4,078,322 + ABIE51_RS18750 0.24 -0.8 4,078,323 - ABIE51_RS18750 0.24 -1.3 4,078,356 - ABIE51_RS18750 0.34 -0.5 4,078,383 + ABIE51_RS18750 0.43 -0.3 4,078,384 - ABIE51_RS18750 0.43 -0.3 4,078,384 - ABIE51_RS18750 0.43 -0.2 4,078,535 + +0.3 4,078,535 + +0.6 4,078,535 + -1.2 4,078,536 - +0.2 4,078,536 - +1.0 4,078,562 + +0.0 4,078,562 + -0.6 4,078,575 + -0.6 4,078,575 + +0.5 4,078,743 + -0.8 4,078,743 + +0.2 4,078,743 + +1.0 4,078,743 + -1.1 4,078,744 - +0.3 4,078,744 - -0.8 4,078,744 - +0.3 4,078,744 - +1.6 4,078,744 - +0.0 4,079,102 + ABIE51_RS18755 0.74 +1.6 4,079,103 - ABIE51_RS18755 0.74 -0.1 4,079,118 + ABIE51_RS18755 0.78 +0.1 4,079,539 - +0.6 4,079,539 - -0.2 4,079,539 - +0.2 4,079,580 + ABIE51_RS18760 0.18 -0.8 4,079,581 - ABIE51_RS18760 0.18 -0.5 4,079,581 - ABIE51_RS18760 0.18 +1.7 4,079,856 + +0.7 4,079,856 + +1.6 4,079,856 + +1.0 4,079,856 + +0.8 4,079,870 + -3.4 4,079,870 + +0.5 4,079,871 - -1.1 4,079,892 + +2.1 4,079,892 + -0.4 4,079,892 + +0.1 4,079,892 + +0.2 4,079,892 + +0.1 4,079,892 + +0.9 4,079,893 - +1.1 4,079,948 + +0.5 4,079,984 + -0.7 4,079,984 + -0.1 4,079,985 - -0.6 4,080,057 + +0.0 4,080,057 + +0.1 4,080,057 + +1.3 4,080,057 + -0.1 4,080,058 - -0.6 4,080,058 - -1.2 4,080,058 - +0.1 4,080,067 + +0.6 4,080,067 + +0.9 4,080,083 + +0.1 4,080,083 + -0.3 4,080,083 + +0.5 4,080,083 + +0.0 4,080,083 + +0.8 4,080,083 + +0.2 4,080,083 + +1.7 4,080,083 + -0.4 4,080,083 + +0.6 4,080,083 + -2.6 4,080,083 + +0.5 4,080,083 + -1.4 4,080,083 + -0.4 4,080,083 + -0.1 4,080,083 + -0.4 4,080,083 + +0.1 4,080,084 - +0.2 4,080,084 - +0.9 4,080,084 - +0.3 4,080,084 - -1.3 4,080,084 - -0.8 4,080,084 - +1.2 4,080,084 - -0.3 4,080,084 - -0.8 4,080,084 - -0.5 4,080,087 + +0.2 4,080,087 + +0.5 4,080,087 + -0.4 4,080,087 + +0.8 4,080,087 + -0.0 4,080,087 + +0.5 4,080,087 + -0.2 4,080,087 + +0.8 4,080,087 + +0.2 4,080,087 + -0.1 4,080,088 - -0.0 4,080,088 - +0.5 4,080,088 - +0.6 4,080,088 - +0.5 4,080,088 - -2.7 4,080,088 - +2.3 4,080,088 - -0.1 4,080,088 - +0.3 4,080,088 - +0.2 4,080,088 - -2.8 4,080,108 + +0.9 4,080,109 - -0.6 4,080,160 + -0.2 4,080,160 + +1.0 4,080,160 + -0.2 4,080,161 - +0.4
Or see this region's nucleotide sequence