Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS02485 and ABIE51_RS02490 are separated by 17 nucleotides ABIE51_RS02490 and ABIE51_RS02495 are separated by 21 nucleotides
ABIE51_RS02485: ABIE51_RS02485 - glutathione-independent formaldehyde dehydrogenase, at 550,752 to 551,891
_RS02485
ABIE51_RS02490: ABIE51_RS02490 - L-dopachrome tautomerase-related protein, at 551,909 to 553,024
_RS02490
ABIE51_RS02495: ABIE51_RS02495 - hypothetical protein, at 553,046 to 553,873
_RS02495
Position (kb) 551
552
553
554 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 550.945 kb on + strand, within ABIE51_RS02485 at 550.945 kb on + strand, within ABIE51_RS02485 at 551.139 kb on + strand, within ABIE51_RS02485 at 551.140 kb on - strand, within ABIE51_RS02485 at 551.140 kb on - strand, within ABIE51_RS02485 at 551.203 kb on - strand, within ABIE51_RS02485 at 551.212 kb on - strand, within ABIE51_RS02485 at 551.296 kb on - strand, within ABIE51_RS02485 at 551.296 kb on - strand, within ABIE51_RS02485 at 551.328 kb on + strand, within ABIE51_RS02485 at 551.353 kb on - strand, within ABIE51_RS02485 at 551.688 kb on + strand, within ABIE51_RS02485 at 551.689 kb on - strand, within ABIE51_RS02485 at 551.734 kb on - strand, within ABIE51_RS02485 at 551.734 kb on - strand, within ABIE51_RS02485 at 551.734 kb on - strand, within ABIE51_RS02485 at 551.902 kb on + strand at 552.374 kb on + strand, within ABIE51_RS02490 at 552.417 kb on - strand, within ABIE51_RS02490 at 552.417 kb on - strand, within ABIE51_RS02490 at 552.626 kb on + strand, within ABIE51_RS02490 at 552.657 kb on - strand, within ABIE51_RS02490 at 552.782 kb on + strand, within ABIE51_RS02490 at 552.783 kb on - strand, within ABIE51_RS02490 at 552.783 kb on - strand, within ABIE51_RS02490 at 552.783 kb on - strand, within ABIE51_RS02490 at 552.874 kb on + strand, within ABIE51_RS02490 at 552.875 kb on - strand, within ABIE51_RS02490 at 552.905 kb on + strand, within ABIE51_RS02490 at 552.906 kb on - strand, within ABIE51_RS02490 at 552.906 kb on - strand, within ABIE51_RS02490 at 553.090 kb on - strand at 553.172 kb on + strand, within ABIE51_RS02495 at 553.221 kb on + strand, within ABIE51_RS02495 at 553.221 kb on + strand, within ABIE51_RS02495 at 553.498 kb on - strand, within ABIE51_RS02495 at 553.638 kb on + strand, within ABIE51_RS02495 at 553.638 kb on + strand, within ABIE51_RS02495 at 553.715 kb on + strand, within ABIE51_RS02495 at 553.716 kb on - strand, within ABIE51_RS02495 at 553.716 kb on - strand, within ABIE51_RS02495 at 553.716 kb on - strand, within ABIE51_RS02495 at 553.716 kb on - strand, within ABIE51_RS02495 at 553.801 kb on + strand at 553.859 kb on - strand at 553.977 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 550,945 + ABIE51_RS02485 0.17 +1.6 550,945 + ABIE51_RS02485 0.17 -0.3 551,139 + ABIE51_RS02485 0.34 +0.7 551,140 - ABIE51_RS02485 0.34 +0.0 551,140 - ABIE51_RS02485 0.34 +0.1 551,203 - ABIE51_RS02485 0.40 -0.1 551,212 - ABIE51_RS02485 0.40 -0.0 551,296 - ABIE51_RS02485 0.48 -1.1 551,296 - ABIE51_RS02485 0.48 +0.2 551,328 + ABIE51_RS02485 0.51 +0.4 551,353 - ABIE51_RS02485 0.53 -2.9 551,688 + ABIE51_RS02485 0.82 +0.1 551,689 - ABIE51_RS02485 0.82 -0.2 551,734 - ABIE51_RS02485 0.86 +0.6 551,734 - ABIE51_RS02485 0.86 -1.9 551,734 - ABIE51_RS02485 0.86 +0.0 551,902 + -0.1 552,374 + ABIE51_RS02490 0.42 +0.6 552,417 - ABIE51_RS02490 0.46 -0.7 552,417 - ABIE51_RS02490 0.46 -0.3 552,626 + ABIE51_RS02490 0.64 +0.4 552,657 - ABIE51_RS02490 0.67 -0.1 552,782 + ABIE51_RS02490 0.78 -0.1 552,783 - ABIE51_RS02490 0.78 +0.4 552,783 - ABIE51_RS02490 0.78 -0.1 552,783 - ABIE51_RS02490 0.78 -0.4 552,874 + ABIE51_RS02490 0.86 -0.1 552,875 - ABIE51_RS02490 0.87 -0.3 552,905 + ABIE51_RS02490 0.89 +0.3 552,906 - ABIE51_RS02490 0.89 -1.6 552,906 - ABIE51_RS02490 0.89 -1.1 553,090 - +0.2 553,172 + ABIE51_RS02495 0.15 -1.0 553,221 + ABIE51_RS02495 0.21 +0.4 553,221 + ABIE51_RS02495 0.21 +0.3 553,498 - ABIE51_RS02495 0.55 -3.0 553,638 + ABIE51_RS02495 0.71 -1.0 553,638 + ABIE51_RS02495 0.71 +0.5 553,715 + ABIE51_RS02495 0.81 -0.4 553,716 - ABIE51_RS02495 0.81 -0.3 553,716 - ABIE51_RS02495 0.81 +1.7 553,716 - ABIE51_RS02495 0.81 -0.4 553,716 - ABIE51_RS02495 0.81 -1.9 553,801 + -0.4 553,859 - -0.6 553,977 - +1.5
Or see this region's nucleotide sequence