Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5161

Experiment: Putrescine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (C)
5,949,326	+				+0.3
5,949,327	-				+0.2
5,949,327	-				+0.8
5,949,392	-				-1.2
5,949,392	-				-0.0
5,949,457	+				+0.5
5,949,458	-				+1.5
5,949,492	+				+2.7
5,949,493	-				+0.0
5,949,616	-		Pf6N2E2_5160	0.34	-4.2
5,949,616	-		Pf6N2E2_5160	0.34	-3.1
5,949,855	+				-1.9
5,949,855	+				-0.8
5,949,855	+				-3.3
5,949,855	+				-4.9
5,949,856	-				-3.2
5,949,856	-				-3.5
5,949,856	-				-1.8
5,949,856	-				-2.4
5,949,856	-				-3.5
5,949,856	-				-1.5
5,949,879	+				-0.3
5,949,879	+				-2.3
5,949,879	+				-1.8
5,949,880	-				-3.0
5,949,880	-				-3.7
5,949,880	-				-4.3
5,949,880	-				-5.0
5,949,949	+				-3.1
5,949,949	+				-2.9
5,949,949	+				-3.6
5,949,957	+				-2.9
5,949,957	+				-3.0
5,949,957	+				-3.8
5,949,958	-				+0.5
5,949,958	-				+0.7
5,950,024	+				-3.1
5,950,024	+				-3.0
5,950,024	+				-1.8
5,950,025	-				+0.2
5,950,048	-				+0.3
5,950,084	+				-0.2
5,950,084	+				-0.6
5,950,084	+				+0.1
5,950,085	-				+0.7
5,950,117	+				-0.5
5,950,117	+				+0.0
5,950,140	+				-0.2
5,950,140	+				+0.4
5,950,141	-				+0.2
5,950,243	+				+0.6
5,950,243	+				-1.5
5,950,243	+				+0.0
5,950,244	-				+0.1
5,950,244	-				+0.3
5,950,252	-				-1.0
5,950,298	+				+0.8
5,950,298	+				+0.7
5,950,298	+				+0.6
5,950,298	+				+1.1
5,950,299	-				-0.1
5,950,478	+		Pf6N2E2_5161	0.16	+0.5
5,950,529	+		Pf6N2E2_5161	0.21	+0.4
5,950,529	+		Pf6N2E2_5161	0.21	+0.3
5,950,904	+		Pf6N2E2_5161	0.53	+0.2
5,950,904	+		Pf6N2E2_5161	0.53	+0.5
5,950,904	+		Pf6N2E2_5161	0.53	-0.3
5,950,904	+		Pf6N2E2_5161	0.53	-0.7
5,950,904	+		Pf6N2E2_5161	0.53	+0.2
5,950,904	+		Pf6N2E2_5161	0.53	-0.1
5,950,905	-		Pf6N2E2_5161	0.53	+1.0
5,950,905	-		Pf6N2E2_5161	0.53	-0.3
5,950,905	-		Pf6N2E2_5161	0.53	+0.1
5,950,905	-		Pf6N2E2_5161	0.53	+0.4
5,950,919	+		Pf6N2E2_5161	0.54	+0.1
5,950,919	+		Pf6N2E2_5161	0.54	+0.7
5,950,920	-		Pf6N2E2_5161	0.54	+0.9
5,950,920	-		Pf6N2E2_5161	0.54	+0.4
5,950,988	+		Pf6N2E2_5161	0.60	+0.0
5,950,988	+		Pf6N2E2_5161	0.60	-0.5
5,950,988	+		Pf6N2E2_5161	0.60	+0.2
5,950,989	-		Pf6N2E2_5161	0.60	+1.4
5,950,989	-		Pf6N2E2_5161	0.60	+0.1
5,951,075	+		Pf6N2E2_5161	0.67	+0.0
5,951,075	+		Pf6N2E2_5161	0.67	+0.3
5,951,075	+		Pf6N2E2_5161	0.67	+0.2
5,951,075	+		Pf6N2E2_5161	0.67	+1.0
5,951,075	+		Pf6N2E2_5161	0.67	+1.4
5,951,076	-		Pf6N2E2_5161	0.67	-0.8
5,951,076	-		Pf6N2E2_5161	0.67	-0.2
5,951,076	-		Pf6N2E2_5161	0.67	+0.0
5,951,076	-		Pf6N2E2_5161	0.67	+0.3
5,951,188	-		Pf6N2E2_5161	0.77	-0.0
5,951,246	+		Pf6N2E2_5161	0.82	-0.4
5,951,246	+		Pf6N2E2_5161	0.82	-0.2
5,951,246	+		Pf6N2E2_5161	0.82	+0.5
5,951,247	-		Pf6N2E2_5161	0.82	+0.5
5,951,247	-		Pf6N2E2_5161	0.82	-0.0
5,951,252	+		Pf6N2E2_5161	0.82	+0.6
5,951,252	+		Pf6N2E2_5161	0.82	+0.3
5,951,252	+		Pf6N2E2_5161	0.82	+0.4
5,951,252	+		Pf6N2E2_5161	0.82	+0.7
5,951,253	-		Pf6N2E2_5161	0.82	+0.7
5,951,253	-		Pf6N2E2_5161	0.82	+0.3
5,951,384	+				-0.2
5,951,439	+				-1.0
5,951,503	+				+0.2
5,951,553	+		Pf6N2E2_5162	0.13	+0.3
5,951,553	+		Pf6N2E2_5162	0.13	+0.1
5,951,553	+		Pf6N2E2_5162	0.13	+0.3
5,951,565	+		Pf6N2E2_5162	0.14	+0.9
5,951,565	+		Pf6N2E2_5162	0.14	+0.7
5,951,794	+		Pf6N2E2_5162	0.45	+0.3
5,951,833	+		Pf6N2E2_5162	0.50	-0.3
5,951,834	-		Pf6N2E2_5162	0.50	-0.0
5,951,992	+		Pf6N2E2_5162	0.71	-0.1
5,951,992	+		Pf6N2E2_5162	0.71	+0.5
5,951,992	+		Pf6N2E2_5162	0.71	-0.7
5,951,992	+		Pf6N2E2_5162	0.71	+0.1
5,951,992	+		Pf6N2E2_5162	0.71	+1.4
5,951,992	+		Pf6N2E2_5162	0.71	+0.2
5,951,992	+		Pf6N2E2_5162	0.71	-0.1
5,951,992	+		Pf6N2E2_5162	0.71	-0.2
5,951,993	-		Pf6N2E2_5162	0.72	+0.1
5,951,993	-		Pf6N2E2_5162	0.72	+1.0
5,951,993	-		Pf6N2E2_5162	0.72	+0.9
5,951,993	-		Pf6N2E2_5162	0.72	+1.6
5,951,993	-		Pf6N2E2_5162	0.72	+0.6
5,952,050	+		Pf6N2E2_5162	0.79	+0.2
5,952,051	-		Pf6N2E2_5162	0.79	+0.6
5,952,052	+		Pf6N2E2_5162	0.80	+0.6
5,952,053	-		Pf6N2E2_5162	0.80	+0.5
5,952,053	-		Pf6N2E2_5162	0.80	+0.3
5,952,053	-		Pf6N2E2_5162	0.80	-0.3
5,952,053	-		Pf6N2E2_5162	0.80	-0.8
5,952,103	+		Pf6N2E2_5162	0.86	-0.4
5,952,161	+				-0.1
5,952,161	+				+0.2
5,952,256	+		Pf6N2E2_5163	0.30	-0.6
5,952,256	+		Pf6N2E2_5163	0.30	-0.5
5,952,256	+		Pf6N2E2_5163	0.30	-0.3
5,952,368	+		Pf6N2E2_5163	0.65	+0.1
5,952,368	+		Pf6N2E2_5163	0.65	-0.0
5,952,368	+		Pf6N2E2_5163	0.65	+0.1
5,952,374	+		Pf6N2E2_5163	0.67	+0.4
5,952,374	+		Pf6N2E2_5163	0.67	-1.0
5,952,374	+		Pf6N2E2_5163	0.67	+1.0
5,952,374	+		Pf6N2E2_5163	0.67	+0.1
5,952,374	+		Pf6N2E2_5163	0.67	+0.5
5,952,374	+		Pf6N2E2_5163	0.67	-1.0
5,952,374	+		Pf6N2E2_5163	0.67	-0.0
5,952,374	+		Pf6N2E2_5163	0.67	+1.0
5,952,374	+		Pf6N2E2_5163	0.67	+0.5
5,952,374	+		Pf6N2E2_5163	0.67	+0.0
5,952,375	-		Pf6N2E2_5163	0.68	+0.2
5,952,375	-		Pf6N2E2_5163	0.68	+0.2
5,952,375	-		Pf6N2E2_5163	0.68	+0.4
5,952,375	-		Pf6N2E2_5163	0.68	-1.6
5,952,375	-		Pf6N2E2_5163	0.68	+0.3
5,952,375	-		Pf6N2E2_5163	0.68	+0.1
5,952,375	-		Pf6N2E2_5163	0.68	-0.0
5,952,375	-		Pf6N2E2_5163	0.68	+0.4
5,952,375	-		Pf6N2E2_5163	0.68	+0.2
5,952,375	-		Pf6N2E2_5163	0.68	-0.2
5,952,375	-		Pf6N2E2_5163	0.68	-0.5
5,952,375	-		Pf6N2E2_5163	0.68	+0.5
5,952,375	-		Pf6N2E2_5163	0.68	+0.9