Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3165

Experiment: Choline chloride 40 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 40 mM
3,300,517	+				-0.9
3,300,517	+				-0.1
3,300,517	+				-0.5
3,300,517	+				+0.5
3,300,518	-				-0.4
3,300,518	-				+0.3
3,300,518	-				-0.9
3,300,531	-				+0.6
3,300,531	-				+1.1
3,300,553	+				-0.4
3,300,553	+				+0.4
3,300,553	+				-0.1
3,300,553	+				-0.3
3,300,554	-				-0.3
3,300,554	-				-0.4
3,300,554	-				+0.1
3,300,554	-				+0.5
3,300,574	+				+0.1
3,300,575	-				+1.2
3,300,706	+		Ga0059261_3163	0.20	-0.4
3,300,706	+		Ga0059261_3163	0.20	-0.3
3,300,707	-		Ga0059261_3163	0.21	+0.8
3,300,756	+				+0.8
3,300,809	-				-0.3
3,300,815	-		Ga0059261_3163	0.47	-0.6
3,300,815	-		Ga0059261_3163	0.47	+0.0
3,300,815	-		Ga0059261_3163	0.47	-0.1
3,300,829	+				+2.1
3,300,830	-		Ga0059261_3163	0.51	+0.2
3,300,830	-		Ga0059261_3163	0.51	+0.9
3,300,838	+		Ga0059261_3163	0.53	+0.2
3,300,838	+		Ga0059261_3163	0.53	+0.5
3,300,838	+		Ga0059261_3163	0.53	-0.3
3,300,838	+		Ga0059261_3163	0.53	-0.2
3,300,838	+		Ga0059261_3163	0.53	-0.1
3,300,839	-		Ga0059261_3163	0.53	+0.4
3,300,839	-		Ga0059261_3163	0.53	-0.2
3,300,854	-		Ga0059261_3163	0.56	+0.1
3,300,854	-		Ga0059261_3163	0.56	+0.1
3,300,860	-		Ga0059261_3163	0.58	-2.3
3,300,860	-		Ga0059261_3163	0.58	-0.2
3,300,860	-		Ga0059261_3163	0.58	+1.2
3,300,871	+		Ga0059261_3163	0.61	+0.3
3,300,871	+		Ga0059261_3163	0.61	-0.4
3,300,872	-		Ga0059261_3163	0.61	+0.1
3,300,872	-		Ga0059261_3163	0.61	-0.6
3,300,874	+		Ga0059261_3163	0.61	-0.3
3,300,874	+		Ga0059261_3163	0.61	+0.3
3,300,874	+		Ga0059261_3163	0.61	-0.4
3,300,874	+		Ga0059261_3163	0.61	-0.0
3,300,874	+		Ga0059261_3163	0.61	+0.2
3,300,874	+		Ga0059261_3163	0.61	+0.3
3,300,874	+		Ga0059261_3163	0.61	-0.5
3,300,874	+		Ga0059261_3163	0.61	-0.2
3,300,874	+		Ga0059261_3163	0.61	-0.4
3,300,875	-		Ga0059261_3163	0.62	+0.1
3,300,875	-		Ga0059261_3163	0.62	-0.1
3,300,875	-		Ga0059261_3163	0.62	-0.1
3,300,880	+		Ga0059261_3163	0.63	+0.8
3,300,880	+		Ga0059261_3163	0.63	-0.6
3,300,880	+		Ga0059261_3163	0.63	-0.4
3,300,880	+		Ga0059261_3163	0.63	+0.8
3,300,880	+		Ga0059261_3163	0.63	+0.1
3,300,880	+		Ga0059261_3163	0.63	-0.9
3,300,881	-		Ga0059261_3163	0.63	-0.0
3,300,881	-		Ga0059261_3163	0.63	+0.4
3,300,881	-		Ga0059261_3163	0.63	+0.6
3,300,892	+		Ga0059261_3163	0.66	+0.3
3,300,892	+		Ga0059261_3163	0.66	-0.4
3,300,892	+		Ga0059261_3163	0.66	+0.3
3,300,893	-				+0.1
3,300,893	-		Ga0059261_3163	0.66	+1.2
3,300,895	+		Ga0059261_3163	0.66	+0.1
3,300,910	+		Ga0059261_3163	0.70	+0.1
3,300,910	+		Ga0059261_3163	0.70	+0.8
3,300,911	-		Ga0059261_3163	0.70	-0.2
3,300,911	-		Ga0059261_3163	0.70	-0.5
3,300,911	-		Ga0059261_3163	0.70	+0.5
3,300,928	+		Ga0059261_3163	0.74	+0.1
3,300,929	-		Ga0059261_3163	0.75	+0.3
3,300,929	-		Ga0059261_3163	0.75	+0.3
3,300,931	+		Ga0059261_3163	0.75	+0.1
3,300,931	+		Ga0059261_3163	0.75	+1.1
3,300,931	+		Ga0059261_3163	0.75	+0.7
3,300,931	+		Ga0059261_3163	0.75	-0.3
3,300,931	+		Ga0059261_3163	0.75	+1.6
3,300,932	-		Ga0059261_3163	0.75	-0.3
3,300,932	-		Ga0059261_3163	0.75	-0.2
3,300,932	-		Ga0059261_3163	0.75	-0.9
3,300,932	-		Ga0059261_3163	0.75	+0.1
3,300,934	+		Ga0059261_3163	0.76	+0.6
3,300,935	-		Ga0059261_3163	0.76	-0.1
3,300,935	-		Ga0059261_3163	0.76	-0.0
3,300,943	+		Ga0059261_3163	0.78	-0.4
3,300,943	+		Ga0059261_3163	0.78	-0.2
3,300,944	-		Ga0059261_3163	0.78	-0.2
3,300,985	+		Ga0059261_3163	0.88	+0.5
3,300,986	-		Ga0059261_3163	0.89	-0.2
3,300,986	-		Ga0059261_3163	0.89	+0.2
3,300,986	-		Ga0059261_3163	0.89	+0.2
3,300,986	-		Ga0059261_3163	0.89	-0.9
3,300,994	+				-0.2
3,301,021	+				-2.4
3,301,021	+				-0.1
3,301,021	+				+0.8
3,301,022	-				-0.8
3,301,042	-				-0.4
3,301,068	-				-0.4
3,301,068	-				+0.3
3,301,225	+		Ga0059261_3164	0.45	-0.0
3,301,225	+		Ga0059261_3164	0.45	+0.1
3,301,225	+		Ga0059261_3164	0.45	-0.2
3,301,226	-		Ga0059261_3164	0.45	-0.2
3,301,226	-		Ga0059261_3164	0.45	+0.2
3,301,226	-		Ga0059261_3164	0.45	-0.2
3,301,226	-		Ga0059261_3164	0.45	-0.2
3,301,226	-		Ga0059261_3164	0.45	+0.5
3,301,226	-		Ga0059261_3164	0.45	+0.7
3,301,226	-		Ga0059261_3164	0.45	+0.7
3,301,226	-		Ga0059261_3164	0.45	+0.8
3,301,226	-		Ga0059261_3164	0.45	-0.6
3,301,226	-		Ga0059261_3164	0.45	-0.2
3,301,378	+				+0.2
3,301,379	-				+0.6
3,301,461	+				+0.2
3,301,462	-				+0.8
3,301,504	+				+0.1
3,301,735	+		Ga0059261_3165	0.31	+0.4
3,301,735	+		Ga0059261_3165	0.31	-0.0
3,301,735	+		Ga0059261_3165	0.31	+0.4
3,301,735	+		Ga0059261_3165	0.31	+0.6
3,301,736	-		Ga0059261_3165	0.31	+0.5
3,301,736	-		Ga0059261_3165	0.31	+0.5
3,301,736	-		Ga0059261_3165	0.31	-0.1
3,301,736	-		Ga0059261_3165	0.31	+0.2
3,301,935	+		Ga0059261_3165	0.57	+0.0
3,301,936	-		Ga0059261_3165	0.58	+0.5
3,302,199	+				-1.2
3,302,199	+				-0.8
3,302,199	+				-1.5
3,302,199	+				-0.9
3,302,200	-				-1.6
3,302,200	-				+0.1
3,302,200	-				+0.6
3,302,200	-				+0.6
3,302,266	+				-1.1
3,302,266	+				-0.2
3,302,282	+				+1.5
3,302,283	-				-0.3
3,303,162	-				-1.9
3,303,162	-				-1.2
3,303,162	-				-0.3
3,303,162	-				-0.5
3,303,203	-				-0.3
3,303,203	-				-2.1
3,303,203	-				+0.1
3,303,203	-				+0.1
3,303,203	-				-1.2
3,303,203	-				-1.9
3,303,203	-				-1.4
3,303,203	-				+0.1
3,303,205	-				-1.7
3,303,205	-				-1.1
3,303,205	-				+1.1
3,303,205	-				-1.1
3,303,205	-				+0.3
3,303,205	-				-1.3
3,303,205	-				+0.1
3,303,205	-				-0.5
3,303,208	-				-1.2
3,303,208	-				+0.2
3,303,208	-				+0.0
3,303,208	-				+0.1
3,303,208	-				-0.1
3,303,208	-				-0.8
3,303,208	-				+0.1
3,303,208	-				-0.2
3,303,208	-				+0.1