Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1606

Experiment: Choline chloride 40 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 40 mM
1,682,473	+		Ga0059261_1604	0.76	+1.1
1,682,474	-		Ga0059261_1604	0.76	+0.1
1,682,474	-		Ga0059261_1604	0.76	+0.4
1,682,474	-		Ga0059261_1604	0.76	+0.2
1,682,791	+				+0.5
1,682,791	+				+0.6
1,682,791	+				+0.3
1,682,792	-				-1.9
1,682,792	-				-0.0
1,682,941	-		Ga0059261_1605	0.24	-0.7
1,682,941	-		Ga0059261_1605	0.24	+1.1
1,683,026	-		Ga0059261_1605	0.37	-0.3
1,683,026	-		Ga0059261_1605	0.37	-0.3
1,683,106	+		Ga0059261_1605	0.50	+0.6
1,683,106	+		Ga0059261_1605	0.50	-0.8
1,683,106	+		Ga0059261_1605	0.50	-0.7
1,683,106	+		Ga0059261_1605	0.50	-1.1
1,683,106	+		Ga0059261_1605	0.50	-0.8
1,683,106	+		Ga0059261_1605	0.50	-1.9
1,683,107	-		Ga0059261_1605	0.50	+0.1
1,683,107	-		Ga0059261_1605	0.50	-0.4
1,683,107	-		Ga0059261_1605	0.50	-0.5
1,683,107	-		Ga0059261_1605	0.50	-0.5
1,683,107	-		Ga0059261_1605	0.50	-0.5
1,683,107	-		Ga0059261_1605	0.50	-0.3
1,683,107	-		Ga0059261_1605	0.50	-2.6
1,683,107	-		Ga0059261_1605	0.50	-1.4
1,683,367	+				-1.3
1,683,367	+				+0.1
1,683,367	+				-0.7
1,683,367	+				+0.5
1,683,367	+				-0.1
1,683,367	+				+0.4
1,683,367	+				+1.6
1,683,368	-				+0.5
1,683,368	-				-0.7
1,683,368	-				-0.0
1,683,368	-				+0.2
1,683,368	-				+0.4
1,683,368	-				-0.4
1,683,368	-				+0.2
1,683,368	-				-0.1
1,683,422	+				+0.7
1,683,559	-		Ga0059261_1606	0.23	+0.4
1,683,610	-		Ga0059261_1606	0.34	-1.1
1,683,610	-		Ga0059261_1606	0.34	+0.6
1,683,726	+		Ga0059261_1606	0.60	-0.2
1,683,726	+		Ga0059261_1606	0.60	-0.3
1,683,726	+		Ga0059261_1606	0.60	+0.2
1,683,726	+		Ga0059261_1606	0.60	+0.3
1,683,726	+		Ga0059261_1606	0.60	+0.5
1,683,726	+		Ga0059261_1606	0.60	+1.1
1,683,726	+		Ga0059261_1606	0.60	+1.3
1,683,726	+		Ga0059261_1606	0.60	+0.5
1,683,726	+		Ga0059261_1606	0.60	+0.2
1,683,727	-		Ga0059261_1606	0.60	+0.2
1,683,727	-		Ga0059261_1606	0.60	+0.3
1,683,727	-		Ga0059261_1606	0.60	-0.6
1,683,855	+		Ga0059261_1606	0.89	+2.8
1,683,855	+		Ga0059261_1606	0.89	+0.7
1,683,855	+		Ga0059261_1606	0.89	-0.3
1,683,855	+		Ga0059261_1606	0.89	+1.1
1,683,855	+		Ga0059261_1606	0.89	+0.4
1,683,856	-		Ga0059261_1606	0.89	+0.3
1,683,973	+				-0.0
1,683,973	+				-0.4
1,683,980	+				-0.7
1,684,011	+		Ga0059261_1607	0.14	-0.3
1,684,011	+		Ga0059261_1607	0.14	-0.8
1,684,012	-		Ga0059261_1607	0.14	+1.2
1,684,012	-		Ga0059261_1607	0.14	-0.5
1,684,063	+		Ga0059261_1607	0.20	-0.5
1,684,063	+		Ga0059261_1607	0.20	-0.2
1,684,063	+		Ga0059261_1607	0.20	+0.4
1,684,064	-		Ga0059261_1607	0.20	-0.4
1,684,064	-		Ga0059261_1607	0.20	+0.4
1,684,064	-		Ga0059261_1607	0.20	+0.5
1,684,064	-		Ga0059261_1607	0.20	+0.4
1,684,064	-		Ga0059261_1607	0.20	-0.4
1,684,064	-		Ga0059261_1607	0.20	+0.9
1,684,064	-		Ga0059261_1607	0.20	+0.1
1,684,136	+		Ga0059261_1607	0.29	+0.5
1,684,136	+		Ga0059261_1607	0.29	-0.4
1,684,136	+		Ga0059261_1607	0.29	+0.8
1,684,137	-		Ga0059261_1607	0.29	+0.3
1,684,137	-		Ga0059261_1607	0.29	+0.4
1,684,137	-		Ga0059261_1607	0.29	+0.1
1,684,137	-		Ga0059261_1607	0.29	-0.1
1,684,137	-		Ga0059261_1607	0.29	-0.5
1,684,137	-		Ga0059261_1607	0.29	+1.5
1,684,137	-		Ga0059261_1607	0.29	+0.1
1,684,137	-		Ga0059261_1607	0.29	-0.4
1,684,220	+		Ga0059261_1607	0.39	-0.8
1,684,220	+		Ga0059261_1607	0.39	+0.1
1,684,220	+		Ga0059261_1607	0.39	+0.4
1,684,220	+		Ga0059261_1607	0.39	+0.7
1,684,221	-				-0.9
1,684,221	-		Ga0059261_1607	0.39	+0.2
1,684,221	-		Ga0059261_1607	0.39	+0.5
1,684,221	-		Ga0059261_1607	0.39	-0.1
1,684,221	-		Ga0059261_1607	0.39	-0.6
1,684,221	-		Ga0059261_1607	0.39	+0.1
1,684,221	-		Ga0059261_1607	0.39	+0.8
1,684,221	-		Ga0059261_1607	0.39	-0.2
1,684,292	+		Ga0059261_1607	0.48	+0.8
1,684,292	+		Ga0059261_1607	0.48	-0.1
1,684,292	+		Ga0059261_1607	0.48	+1.6
1,684,292	+		Ga0059261_1607	0.48	+0.1
1,684,292	+		Ga0059261_1607	0.48	+0.3
1,684,292	+		Ga0059261_1607	0.48	-0.2
1,684,292	+		Ga0059261_1607	0.48	+0.2
1,684,292	+		Ga0059261_1607	0.48	-0.0
1,684,292	+		Ga0059261_1607	0.48	-0.3
1,684,293	-		Ga0059261_1607	0.48	-0.5
1,684,293	-		Ga0059261_1607	0.48	+0.6
1,684,293	-		Ga0059261_1607	0.48	+0.1
1,684,293	-		Ga0059261_1607	0.48	-0.0
1,684,293	-		Ga0059261_1607	0.48	-0.5
1,684,293	-		Ga0059261_1607	0.48	+0.8
1,684,293	-		Ga0059261_1607	0.48	-0.9
1,684,293	-		Ga0059261_1607	0.48	-0.6
1,684,293	-		Ga0059261_1607	0.48	+0.4
1,684,293	-		Ga0059261_1607	0.48	+0.3
1,684,339	-		Ga0059261_1607	0.53	-0.2
1,684,454	+		Ga0059261_1607	0.67	+0.3
1,684,454	+		Ga0059261_1607	0.67	+0.5
1,684,454	+		Ga0059261_1607	0.67	-0.8
1,684,454	+		Ga0059261_1607	0.67	+0.6
1,684,454	+		Ga0059261_1607	0.67	-0.0
1,684,454	+		Ga0059261_1607	0.67	-0.4
1,684,454	+		Ga0059261_1607	0.67	-0.6
1,684,454	+		Ga0059261_1607	0.67	-0.3
1,684,454	+		Ga0059261_1607	0.67	-0.1
1,684,454	+		Ga0059261_1607	0.67	-0.0
1,684,454	+				+0.7
1,684,454	+		Ga0059261_1607	0.67	-0.2
1,684,455	-		Ga0059261_1607	0.67	+0.3
1,684,455	-		Ga0059261_1607	0.67	+0.1
1,684,455	-		Ga0059261_1607	0.67	+0.3
1,684,455	-		Ga0059261_1607	0.67	+1.9
1,684,455	-		Ga0059261_1607	0.67	+0.5
1,684,455	-		Ga0059261_1607	0.67	-0.1
1,684,455	-		Ga0059261_1607	0.67	+1.1
1,684,455	-		Ga0059261_1607	0.67	-0.3
1,684,455	-		Ga0059261_1607	0.67	-0.1
1,684,455	-		Ga0059261_1607	0.67	+0.1
1,684,455	-		Ga0059261_1607	0.67	-0.1
1,684,455	-		Ga0059261_1607	0.67	+1.3
1,684,455	-		Ga0059261_1607	0.67	+0.2
1,684,455	-		Ga0059261_1607	0.67	+0.9
1,684,455	-		Ga0059261_1607	0.67	+0.1
1,684,456	+		Ga0059261_1607	0.68	-0.1
1,684,456	+		Ga0059261_1607	0.68	-0.6
1,684,456	+		Ga0059261_1607	0.68	-0.1
1,684,456	+		Ga0059261_1607	0.68	+0.1
1,684,457	-		Ga0059261_1607	0.68	+0.5
1,684,457	-		Ga0059261_1607	0.68	-0.0
1,684,457	-		Ga0059261_1607	0.68	-0.6
1,684,457	-		Ga0059261_1607	0.68	+0.4
1,684,457	-		Ga0059261_1607	0.68	+0.2
1,684,623	+		Ga0059261_1607	0.88	+0.5
1,684,623	+		Ga0059261_1607	0.88	+0.4
1,684,623	+		Ga0059261_1607	0.88	-0.8
1,684,623	+		Ga0059261_1607	0.88	+1.1
1,684,623	+		Ga0059261_1607	0.88	-0.1
1,684,624	-		Ga0059261_1607	0.88	+0.1
1,684,624	-		Ga0059261_1607	0.88	+0.2
1,684,624	-		Ga0059261_1607	0.88	+0.8
1,684,624	-		Ga0059261_1607	0.88	+0.5
1,684,638	+		Ga0059261_1607	0.90	+0.7
1,684,638	+		Ga0059261_1607	0.90	+0.2
1,684,639	-		Ga0059261_1607	0.90	+0.2
1,684,658	+				-0.1
1,684,658	+				+0.4
1,684,658	+				-0.3
1,684,658	+				+0.0
1,684,658	+				+0.9
1,684,658	+				+1.1
1,684,658	+				+0.2
1,684,659	-				+0.9
1,684,659	-				-0.1
1,684,695	+				-0.3
1,684,696	-				+0.1
1,684,790	+				+0.1
1,684,790	+				-0.2
1,684,791	-				-0.2
1,684,791	-				+0.4
1,684,791	-				+0.5
1,684,829	+				-0.4
1,684,829	+				-0.3
1,684,829	+				-0.7
1,684,829	+				+0.2
1,684,829	+				+0.5
1,684,829	+				+0.6
1,684,829	+				-0.0
1,684,829	+				-0.6
1,684,829	+				+0.3
1,684,829	+				-0.0
1,684,829	+				-0.2
1,684,829	+				-0.9
1,684,829	+				-0.4
1,684,829	+				+0.3
1,684,829	+				-0.5
1,684,829	+				-0.2
1,684,829	+				+0.7
1,684,830	-				+0.9
1,684,830	-				+0.1
1,684,830	-				+0.2
1,684,830	-				+0.9
1,684,830	-				-0.6
1,684,830	-				-0.1
1,684,830	-				+0.6
1,684,830	-				+0.7
1,684,830	-				-0.3
1,684,830	-				-0.2
1,684,831	+				+0.2
1,684,831	+				-0.3
1,684,832	-				+0.3
1,684,850	+				-0.7
1,684,850	+				+0.9
1,684,850	+				-0.1