Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1127

Experiment: Choline chloride 40 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 40 mM
1,152,027	+		Ga0059261_1126	0.85	+0.1
1,152,027	+		Ga0059261_1126	0.85	+0.2
1,152,027	+		Ga0059261_1126	0.85	+2.5
1,152,027	+		Ga0059261_1126	0.85	+0.3
1,152,028	-		Ga0059261_1126	0.85	-0.2
1,152,028	-		Ga0059261_1126	0.85	+0.3
1,152,028	-		Ga0059261_1126	0.85	+0.3
1,152,028	-		Ga0059261_1126	0.85	+0.4
1,152,105	+				+0.7
1,152,150	+				-0.9
1,152,150	+				+2.3
1,152,151	-				+0.3
1,152,151	-				+0.9
1,152,151	-				+0.3
1,152,151	-				-0.7
1,152,162	+				-1.5
1,152,162	+				-0.7
1,152,162	+				-0.4
1,152,162	+				+0.1
1,152,162	+				-0.7
1,152,163	-				+0.9
1,152,163	-				+0.3
1,152,163	-				+0.3
1,152,163	-				-0.5
1,152,168	+				+0.8
1,152,169	-				-0.1
1,152,169	-				-0.4
1,152,231	+				+1.3
1,152,231	+				-0.1
1,152,231	+				+0.2
1,152,231	+				-0.7
1,152,231	+				-0.4
1,152,232	-				-1.9
1,152,232	-				-1.3
1,152,232	-				+0.0
1,152,390	+		Ga0059261_1127	0.18	+0.1
1,152,459	+		Ga0059261_1127	0.23	+0.5
1,152,459	+		Ga0059261_1127	0.23	-0.2
1,152,460	-		Ga0059261_1127	0.23	+0.5
1,152,477	+		Ga0059261_1127	0.24	+0.3
1,152,478	-		Ga0059261_1127	0.24	+0.6
1,152,478	-		Ga0059261_1127	0.24	+0.0
1,152,478	-		Ga0059261_1127	0.24	-1.2
1,152,478	-		Ga0059261_1127	0.24	+1.3
1,152,478	-		Ga0059261_1127	0.24	-0.7
1,152,478	-		Ga0059261_1127	0.24	-0.3
1,152,478	-		Ga0059261_1127	0.24	+0.0
1,152,537	+		Ga0059261_1127	0.28	+0.6
1,152,537	+		Ga0059261_1127	0.28	+0.2
1,152,537	+		Ga0059261_1127	0.28	+0.2
1,152,537	+				+1.9
1,152,537	+		Ga0059261_1127	0.28	-0.1
1,152,537	+		Ga0059261_1127	0.28	+0.5
1,152,537	+		Ga0059261_1127	0.28	-0.1
1,152,537	+		Ga0059261_1127	0.28	+1.0
1,152,537	+		Ga0059261_1127	0.28	-0.1
1,152,538	-		Ga0059261_1127	0.28	+0.6
1,152,538	-		Ga0059261_1127	0.28	+0.1
1,152,538	-		Ga0059261_1127	0.28	-0.4
1,152,538	-		Ga0059261_1127	0.28	-0.8
1,152,538	-		Ga0059261_1127	0.28	+0.3
1,152,538	-		Ga0059261_1127	0.28	-0.3
1,152,642	+		Ga0059261_1127	0.35	+0.2
1,152,642	+		Ga0059261_1127	0.35	-0.5
1,152,643	-		Ga0059261_1127	0.35	+0.2
1,152,643	-		Ga0059261_1127	0.35	+0.3
1,152,643	-		Ga0059261_1127	0.35	+1.6
1,152,708	+		Ga0059261_1127	0.40	+0.1
1,152,708	+		Ga0059261_1127	0.40	-0.7
1,152,709	-		Ga0059261_1127	0.40	-0.7
1,152,709	-		Ga0059261_1127	0.40	-0.8
1,152,726	+		Ga0059261_1127	0.41	+0.1
1,152,726	+		Ga0059261_1127	0.41	-0.2
1,152,726	+		Ga0059261_1127	0.41	-0.4
1,152,727	-		Ga0059261_1127	0.41	-0.3
1,152,727	-		Ga0059261_1127	0.41	+0.4
1,152,727	-		Ga0059261_1127	0.41	+0.3
1,152,831	+		Ga0059261_1127	0.48	-0.3
1,152,831	+		Ga0059261_1127	0.48	-0.2
1,152,831	+		Ga0059261_1127	0.48	+0.9
1,152,831	+		Ga0059261_1127	0.48	-0.3
1,152,831	+		Ga0059261_1127	0.48	+0.1
1,152,831	+		Ga0059261_1127	0.48	+0.7
1,152,831	+		Ga0059261_1127	0.48	+0.1
1,152,831	+		Ga0059261_1127	0.48	+0.4
1,152,831	+		Ga0059261_1127	0.48	-0.3
1,152,831	+		Ga0059261_1127	0.48	+0.3
1,152,832	-		Ga0059261_1127	0.49	-0.8
1,152,832	-		Ga0059261_1127	0.49	+0.1
1,152,832	-		Ga0059261_1127	0.49	-1.1
1,152,832	-		Ga0059261_1127	0.49	-0.4
1,152,832	-		Ga0059261_1127	0.49	-0.0
1,152,832	-		Ga0059261_1127	0.49	+0.7
1,152,837	+		Ga0059261_1127	0.49	-0.4
1,152,837	+		Ga0059261_1127	0.49	-1.2
1,152,837	+		Ga0059261_1127	0.49	+1.8
1,152,837	+		Ga0059261_1127	0.49	-0.1
1,152,837	+		Ga0059261_1127	0.49	+0.6
1,152,837	+		Ga0059261_1127	0.49	-1.7
1,152,837	+		Ga0059261_1127	0.49	-0.6
1,152,837	+		Ga0059261_1127	0.49	-0.5
1,152,837	+		Ga0059261_1127	0.49	+1.7
1,152,837	+		Ga0059261_1127	0.49	+0.3
1,152,837	+		Ga0059261_1127	0.49	+1.1
1,152,837	+		Ga0059261_1127	0.49	+0.3
1,152,837	+		Ga0059261_1127	0.49	+0.9
1,152,838	-		Ga0059261_1127	0.49	-0.5
1,152,838	-		Ga0059261_1127	0.49	+0.2
1,152,838	-		Ga0059261_1127	0.49	+0.2
1,152,838	-		Ga0059261_1127	0.49	-1.9
1,152,838	-		Ga0059261_1127	0.49	+0.2
1,152,838	-		Ga0059261_1127	0.49	-0.2
1,152,838	-		Ga0059261_1127	0.49	-0.4
1,152,838	-		Ga0059261_1127	0.49	-1.4
1,152,940	+		Ga0059261_1127	0.56	-1.7
1,152,940	+		Ga0059261_1127	0.56	-0.2
1,152,941	-		Ga0059261_1127	0.56	+0.2
1,153,037	-		Ga0059261_1127	0.63	-0.1
1,153,139	-		Ga0059261_1127	0.70	-2.2
1,153,164	+		Ga0059261_1127	0.72	+0.4
1,153,164	+		Ga0059261_1127	0.72	-0.4
1,153,164	+		Ga0059261_1127	0.72	-1.3
1,153,165	-		Ga0059261_1127	0.72	-0.5
1,153,165	-		Ga0059261_1127	0.72	+0.7
1,153,165	-		Ga0059261_1127	0.72	-0.3
1,153,165	-		Ga0059261_1127	0.72	-1.4
1,153,165	-		Ga0059261_1127	0.72	-0.3
1,153,172	+		Ga0059261_1127	0.72	+0.5
1,153,172	+		Ga0059261_1127	0.72	-1.1
1,153,173	-		Ga0059261_1127	0.72	+0.5
1,153,173	-		Ga0059261_1127	0.72	-0.0
1,153,173	-		Ga0059261_1127	0.72	+0.7
1,153,194	-		Ga0059261_1127	0.74	+0.0
1,153,230	+		Ga0059261_1127	0.76	+0.2
1,153,231	-		Ga0059261_1127	0.76	+0.7
1,153,231	-		Ga0059261_1127	0.76	-0.3
1,153,281	+		Ga0059261_1127	0.80	-0.1
1,153,281	+		Ga0059261_1127	0.80	-0.1
1,153,281	+		Ga0059261_1127	0.80	+0.2
1,153,281	+		Ga0059261_1127	0.80	-0.2
1,153,281	+		Ga0059261_1127	0.80	+0.5
1,153,281	+		Ga0059261_1127	0.80	+0.6
1,153,281	+		Ga0059261_1127	0.80	+0.2
1,153,282	-		Ga0059261_1127	0.80	-1.1
1,153,597	-				-1.4
1,153,597	-				+0.7
1,153,598	+				+0.3
1,153,598	+				+0.1
1,153,598	+				-0.2
1,153,598	+				+0.7
1,153,599	-				+1.2
1,153,599	-				+1.0
1,153,599	-				+1.0
1,153,848	+		Ga0059261_1128	0.13	+0.6
1,153,848	+		Ga0059261_1128	0.13	+0.1
1,153,849	-		Ga0059261_1128	0.13	+1.5
1,153,849	-		Ga0059261_1128	0.13	-0.4
1,153,871	+		Ga0059261_1128	0.16	-0.2
1,153,871	+		Ga0059261_1128	0.16	-0.2
1,153,871	+		Ga0059261_1128	0.16	+0.2
1,153,872	-		Ga0059261_1128	0.16	-1.0
1,153,872	-		Ga0059261_1128	0.16	-0.4
1,153,872	-		Ga0059261_1128	0.16	-0.1
1,153,872	-		Ga0059261_1128	0.16	+1.0
1,154,099	+		Ga0059261_1128	0.42	+0.1
1,154,099	+		Ga0059261_1128	0.42	+0.2
1,154,099	+		Ga0059261_1128	0.42	-0.8
1,154,099	+		Ga0059261_1128	0.42	+1.6
1,154,100	-		Ga0059261_1128	0.42	+0.6
1,154,101	+		Ga0059261_1128	0.42	+0.1
1,154,101	+		Ga0059261_1128	0.42	+0.3
1,154,101	+		Ga0059261_1128	0.42	+0.6
1,154,101	+		Ga0059261_1128	0.42	-1.3
1,154,101	+		Ga0059261_1128	0.42	+0.8
1,154,101	+		Ga0059261_1128	0.42	-0.4
1,154,102	-		Ga0059261_1128	0.42	-0.5
1,154,102	-		Ga0059261_1128	0.42	-0.1
1,154,140	+		Ga0059261_1128	0.46	-0.1
1,154,140	+		Ga0059261_1128	0.46	+0.3
1,154,140	+		Ga0059261_1128	0.46	-0.7
1,154,140	+		Ga0059261_1128	0.46	+0.3
1,154,141	-		Ga0059261_1128	0.46	+0.3
1,154,141	-		Ga0059261_1128	0.46	+0.4
1,154,141	-				+0.9
1,154,141	-		Ga0059261_1128	0.46	+0.6
1,154,249	-		Ga0059261_1128	0.59	-0.3
1,154,374	+		Ga0059261_1128	0.73	-0.2
1,154,374	+		Ga0059261_1128	0.73	+0.4
1,154,374	+		Ga0059261_1128	0.73	-0.4
1,154,374	+		Ga0059261_1128	0.73	-0.3
1,154,374	+		Ga0059261_1128	0.73	-0.9
1,154,374	+		Ga0059261_1128	0.73	+1.3
1,154,374	+		Ga0059261_1128	0.73	-0.1
1,154,375	-		Ga0059261_1128	0.73	+0.2
1,154,375	-		Ga0059261_1128	0.73	-0.8
1,154,375	-		Ga0059261_1128	0.73	-0.1
1,154,375	-		Ga0059261_1128	0.73	+0.9
1,154,375	-		Ga0059261_1128	0.73	+0.4
1,154,375	-		Ga0059261_1128	0.73	+0.2
1,154,375	-		Ga0059261_1128	0.73	-0.1
1,154,375	-		Ga0059261_1128	0.73	-0.6
1,154,375	-		Ga0059261_1128	0.73	-0.5
1,154,375	-		Ga0059261_1128	0.73	+1.1
1,154,394	+		Ga0059261_1128	0.75	+0.1
1,154,394	+		Ga0059261_1128	0.75	-0.7
1,154,394	+		Ga0059261_1128	0.75	-0.7
1,154,395	-				+0.9
1,154,395	-		Ga0059261_1128	0.75	+0.3
1,154,446	+		Ga0059261_1128	0.81	+0.3
1,154,446	+		Ga0059261_1128	0.81	+0.3
1,154,447	-		Ga0059261_1128	0.81	+1.3
1,154,447	-		Ga0059261_1128	0.81	+0.3
1,154,447	-		Ga0059261_1128	0.81	-0.1