Experiment: Choline chloride 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0897 and Ga0059261_0898 overlap by 4 nucleotides Ga0059261_0898 and Ga0059261_0899 overlap by 1 nucleotides Ga0059261_0899 and Ga0059261_0900 are separated by 118 nucleotides
Ga0059261_0897: Ga0059261_0897 - Membrane protease subunits, stomatin/prohibitin homologs, at 933,992 to 934,981
_0897
Ga0059261_0898: Ga0059261_0898 - Membrane protein implicated in regulation of membrane protease activity, at 934,978 to 935,433
_0898
Ga0059261_0899: Ga0059261_0899 - hypothetical protein, at 935,433 to 936,047
_0899
Ga0059261_0900: Ga0059261_0900 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 936,166 to 937,227
_0900
Position (kb) 934
935
936 Strain fitness (log2 ratio) -1
0
1
2
3 at 934.035 kb on + strand at 934.035 kb on + strand at 934.036 kb on - strand at 934.036 kb on - strand at 934.043 kb on + strand at 934.079 kb on + strand at 934.079 kb on + strand at 934.079 kb on + strand at 934.085 kb on + strand at 934.085 kb on + strand at 934.086 kb on - strand at 934.086 kb on - strand at 934.086 kb on - strand at 934.087 kb on + strand at 934.087 kb on + strand at 934.088 kb on - strand at 934.088 kb on - strand at 934.088 kb on - strand at 934.142 kb on + strand, within Ga0059261_0897 at 934.142 kb on + strand, within Ga0059261_0897 at 934.157 kb on + strand, within Ga0059261_0897 at 934.158 kb on - strand, within Ga0059261_0897 at 934.295 kb on + strand, within Ga0059261_0897 at 934.295 kb on + strand, within Ga0059261_0897 at 934.295 kb on + strand, within Ga0059261_0897 at 934.296 kb on - strand, within Ga0059261_0897 at 934.296 kb on - strand, within Ga0059261_0897 at 934.296 kb on - strand, within Ga0059261_0897 at 934.296 kb on - strand, within Ga0059261_0897 at 934.313 kb on + strand, within Ga0059261_0897 at 934.313 kb on + strand, within Ga0059261_0897 at 934.313 kb on + strand, within Ga0059261_0897 at 934.313 kb on + strand, within Ga0059261_0897 at 934.314 kb on - strand, within Ga0059261_0897 at 934.314 kb on - strand, within Ga0059261_0897 at 934.314 kb on - strand, within Ga0059261_0897 at 934.314 kb on - strand, within Ga0059261_0897 at 934.314 kb on - strand, within Ga0059261_0897 at 934.314 kb on - strand, within Ga0059261_0897 at 934.314 kb on - strand, within Ga0059261_0897 at 934.314 kb on - strand, within Ga0059261_0897 at 934.757 kb on + strand, within Ga0059261_0897 at 934.757 kb on + strand, within Ga0059261_0897 at 934.757 kb on + strand, within Ga0059261_0897 at 934.757 kb on + strand, within Ga0059261_0897 at 934.757 kb on + strand, within Ga0059261_0897 at 934.758 kb on - strand, within Ga0059261_0897 at 934.758 kb on - strand, within Ga0059261_0897 at 934.758 kb on - strand, within Ga0059261_0897 at 934.775 kb on + strand, within Ga0059261_0897 at 934.775 kb on + strand, within Ga0059261_0897 at 934.775 kb on + strand, within Ga0059261_0897 at 934.775 kb on + strand, within Ga0059261_0897 at 934.776 kb on - strand, within Ga0059261_0897 at 934.776 kb on - strand, within Ga0059261_0897 at 934.776 kb on - strand, within Ga0059261_0897 at 934.776 kb on - strand, within Ga0059261_0897 at 935.063 kb on - strand, within Ga0059261_0898 at 935.063 kb on - strand, within Ga0059261_0898 at 935.197 kb on + strand, within Ga0059261_0898 at 935.198 kb on - strand, within Ga0059261_0898 at 935.279 kb on + strand, within Ga0059261_0898 at 935.280 kb on - strand, within Ga0059261_0898 at 935.461 kb on + strand at 935.486 kb on + strand at 935.505 kb on + strand, within Ga0059261_0899 at 935.506 kb on - strand, within Ga0059261_0899 at 935.506 kb on - strand, within Ga0059261_0899 at 935.506 kb on - strand, within Ga0059261_0899 at 935.583 kb on + strand, within Ga0059261_0899 at 935.583 kb on + strand, within Ga0059261_0899 at 935.584 kb on - strand, within Ga0059261_0899 at 935.584 kb on - strand, within Ga0059261_0899 at 935.584 kb on - strand, within Ga0059261_0899 at 935.648 kb on + strand, within Ga0059261_0899 at 935.648 kb on + strand, within Ga0059261_0899 at 935.648 kb on + strand, within Ga0059261_0899 at 935.648 kb on + strand, within Ga0059261_0899 at 935.649 kb on - strand, within Ga0059261_0899 at 935.649 kb on - strand, within Ga0059261_0899 at 935.680 kb on + strand, within Ga0059261_0899 at 935.681 kb on - strand, within Ga0059261_0899 at 935.701 kb on + strand, within Ga0059261_0899 at 935.775 kb on + strand, within Ga0059261_0899 at 935.775 kb on + strand, within Ga0059261_0899 at 935.946 kb on + strand, within Ga0059261_0899 at 936.042 kb on + strand at 936.042 kb on + strand at 936.042 kb on + strand at 936.042 kb on + strand at 936.042 kb on + strand at 936.042 kb on + strand at 936.043 kb on - strand at 936.106 kb on + strand at 936.106 kb on + strand at 936.106 kb on + strand at 936.106 kb on + strand at 936.106 kb on + strand at 936.106 kb on + strand at 936.106 kb on + strand at 936.107 kb on - strand at 936.107 kb on - strand at 936.107 kb on - strand at 936.107 kb on - strand at 936.107 kb on - strand at 936.352 kb on + strand, within Ga0059261_0900 at 936.353 kb on - strand, within Ga0059261_0900 at 936.353 kb on - strand, within Ga0059261_0900 at 936.353 kb on - strand, within Ga0059261_0900 at 936.353 kb on - strand, within Ga0059261_0900 at 936.353 kb on - strand, within Ga0059261_0900 at 936.353 kb on - strand, within Ga0059261_0900 at 936.353 kb on - strand, within Ga0059261_0900 at 936.391 kb on + strand, within Ga0059261_0900 at 936.392 kb on - strand, within Ga0059261_0900 at 936.392 kb on - strand, within Ga0059261_0900 at 936.392 kb on - strand, within Ga0059261_0900
Per-strain Table
Position Strand Gene LocusTag Fraction Choline chloride 40 mM remove 934,035 + +0.1 934,035 + -0.4 934,036 - -0.1 934,036 - +0.4 934,043 + -1.3 934,079 + +0.5 934,079 + -0.1 934,079 + -0.3 934,085 + +0.3 934,085 + -0.1 934,086 - +0.4 934,086 - -0.5 934,086 - +0.3 934,087 + -1.0 934,087 + -0.5 934,088 - +0.6 934,088 - -0.9 934,088 - -0.7 934,142 + Ga0059261_0897 0.15 +0.2 934,142 + Ga0059261_0897 0.15 -0.0 934,157 + Ga0059261_0897 0.17 +1.2 934,158 - Ga0059261_0897 0.17 -0.3 934,295 + Ga0059261_0897 0.31 -0.1 934,295 + Ga0059261_0897 0.31 +0.2 934,295 + Ga0059261_0897 0.31 -0.1 934,296 - Ga0059261_0897 0.31 +0.7 934,296 - Ga0059261_0897 0.31 +0.9 934,296 - Ga0059261_0897 0.31 -0.1 934,296 - Ga0059261_0897 0.31 +0.6 934,313 + Ga0059261_0897 0.32 +0.3 934,313 + Ga0059261_0897 0.32 +0.1 934,313 + Ga0059261_0897 0.32 -0.3 934,313 + Ga0059261_0897 0.32 -0.4 934,314 - Ga0059261_0897 0.33 -1.1 934,314 - Ga0059261_0897 0.33 +0.1 934,314 - Ga0059261_0897 0.33 -0.1 934,314 - Ga0059261_0897 0.33 -0.6 934,314 - Ga0059261_0897 0.33 +0.6 934,314 - Ga0059261_0897 0.33 +0.7 934,314 - Ga0059261_0897 0.33 -0.2 934,314 - Ga0059261_0897 0.33 -1.5 934,757 + Ga0059261_0897 0.77 +0.7 934,757 + Ga0059261_0897 0.77 -0.3 934,757 + Ga0059261_0897 0.77 -0.7 934,757 + Ga0059261_0897 0.77 -0.7 934,757 + Ga0059261_0897 0.77 +0.6 934,758 - Ga0059261_0897 0.77 +2.9 934,758 - Ga0059261_0897 0.77 -0.4 934,758 - Ga0059261_0897 0.77 +0.4 934,775 + Ga0059261_0897 0.79 +0.9 934,775 + Ga0059261_0897 0.79 -0.2 934,775 + Ga0059261_0897 0.79 +0.4 934,775 + Ga0059261_0897 0.79 +0.2 934,776 - Ga0059261_0897 0.79 +0.7 934,776 - Ga0059261_0897 0.79 +0.4 934,776 - Ga0059261_0897 0.79 +1.5 934,776 - Ga0059261_0897 0.79 +1.2 935,063 - Ga0059261_0898 0.19 +0.3 935,063 - Ga0059261_0898 0.19 -0.9 935,197 + Ga0059261_0898 0.48 +0.3 935,198 - Ga0059261_0898 0.48 -0.3 935,279 + Ga0059261_0898 0.66 -0.1 935,280 - Ga0059261_0898 0.66 +1.6 935,461 + +0.6 935,486 + -0.6 935,505 + Ga0059261_0899 0.12 +0.4 935,506 - Ga0059261_0899 0.12 -1.0 935,506 - Ga0059261_0899 0.12 +0.6 935,506 - Ga0059261_0899 0.12 -0.1 935,583 + Ga0059261_0899 0.24 +0.2 935,583 + Ga0059261_0899 0.24 +0.1 935,584 - Ga0059261_0899 0.25 -0.1 935,584 - Ga0059261_0899 0.25 +0.9 935,584 - Ga0059261_0899 0.25 -0.1 935,648 + Ga0059261_0899 0.35 -0.5 935,648 + Ga0059261_0899 0.35 -0.3 935,648 + Ga0059261_0899 0.35 +0.1 935,648 + Ga0059261_0899 0.35 +0.3 935,649 - Ga0059261_0899 0.35 -0.0 935,649 - Ga0059261_0899 0.35 +0.2 935,680 + Ga0059261_0899 0.40 +1.2 935,681 - Ga0059261_0899 0.40 +0.6 935,701 + Ga0059261_0899 0.44 +0.7 935,775 + Ga0059261_0899 0.56 +0.1 935,775 + Ga0059261_0899 0.56 +0.1 935,946 + Ga0059261_0899 0.83 -0.5 936,042 + +0.1 936,042 + -0.6 936,042 + +0.4 936,042 + +0.7 936,042 + -0.2 936,042 + -0.2 936,043 - -0.7 936,106 + +2.1 936,106 + -0.2 936,106 + -0.0 936,106 + +0.2 936,106 + -1.0 936,106 + -0.2 936,106 + -0.1 936,107 - +0.5 936,107 - -0.4 936,107 - -0.3 936,107 - +0.3 936,107 - +0.4 936,352 + Ga0059261_0900 0.18 +0.0 936,353 - Ga0059261_0900 0.18 -0.5 936,353 - Ga0059261_0900 0.18 -1.1 936,353 - Ga0059261_0900 0.18 -0.3 936,353 - Ga0059261_0900 0.18 -0.1 936,353 - Ga0059261_0900 0.18 +0.2 936,353 - Ga0059261_0900 0.18 +0.4 936,353 - Ga0059261_0900 0.18 +0.9 936,391 + Ga0059261_0900 0.21 +0.1 936,392 - Ga0059261_0900 0.21 -0.2 936,392 - Ga0059261_0900 0.21 +0.1 936,392 - Ga0059261_0900 0.21 -0.6
Or see this region's nucleotide sequence