Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16015

Experiment: Fumarate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fumarate (C)
3,618,519	+		AO356_16010	0.34	+1.1
3,618,519	+		AO356_16010	0.34	-1.4
3,618,520	-		AO356_16010	0.34	+0.7
3,618,520	-		AO356_16010	0.34	+0.4
3,618,520	-		AO356_16010	0.34	+0.5
3,618,520	-		AO356_16010	0.34	+1.1
3,618,520	-		AO356_16010	0.34	+0.1
3,618,520	-		AO356_16010	0.34	+2.7
3,618,520	-		AO356_16010	0.34	-0.9
3,618,534	-		AO356_16010	0.35	-0.5
3,618,534	-		AO356_16010	0.35	+0.7
3,618,534	-		AO356_16010	0.35	+0.2
3,618,542	+		AO356_16010	0.36	-2.1
3,618,543	-		AO356_16010	0.36	-1.6
3,618,543	-		AO356_16010	0.36	-0.3
3,618,543	-		AO356_16010	0.36	-0.8
3,618,601	-		AO356_16010	0.41	-0.7
3,618,601	-		AO356_16010	0.41	+0.1
3,618,601	-		AO356_16010	0.41	-0.6
3,618,623	+		AO356_16010	0.43	-0.1
3,618,623	+		AO356_16010	0.43	-0.5
3,618,623	+		AO356_16010	0.43	-0.2
3,618,623	+		AO356_16010	0.43	-2.1
3,618,624	-		AO356_16010	0.43	+0.0
3,618,624	-		AO356_16010	0.43	+1.0
3,618,624	-		AO356_16010	0.43	+0.7
3,618,624	-		AO356_16010	0.43	+0.9
3,618,702	-		AO356_16010	0.49	-0.9
3,618,702	-		AO356_16010	0.49	-0.1
3,618,788	+		AO356_16010	0.56	-0.4
3,618,789	-		AO356_16010	0.56	+0.9
3,618,804	+		AO356_16010	0.57	-1.4
3,618,855	+		AO356_16010	0.62	+0.4
3,618,855	+		AO356_16010	0.62	+0.2
3,618,855	+		AO356_16010	0.62	-0.9
3,618,856	-		AO356_16010	0.62	+0.3
3,618,856	-		AO356_16010	0.62	+0.6
3,618,856	-		AO356_16010	0.62	+0.0
3,618,856	-		AO356_16010	0.62	-0.3
3,618,881	-		AO356_16010	0.64	-1.2
3,618,924	+		AO356_16010	0.67	-0.7
3,618,925	-		AO356_16010	0.67	-0.6
3,618,940	-		AO356_16010	0.69	+0.0
3,619,288	+				+0.7
3,619,288	+				-0.2
3,619,288	+				-0.0
3,619,288	+				+1.2
3,619,288	+				+1.1
3,619,288	+				-1.4
3,619,288	+				-1.0
3,619,289	-				-0.2
3,619,289	-				+0.4
3,619,289	-				+0.6
3,619,289	-				-0.9
3,619,289	-				-0.6
3,619,289	-				+0.2
3,619,289	-				-0.4
3,619,289	-				+0.1
3,619,289	-				+0.5
3,619,289	-				-0.3
3,619,289	-				+0.3
3,619,289	-				-0.6
3,619,289	-				+0.6
3,619,289	-				+0.0
3,619,290	+				+0.1
3,619,290	+				+0.2
3,619,290	+				+0.1
3,619,290	+				+0.3
3,619,290	+				-0.1
3,619,290	+				-2.1
3,619,291	-				-0.6
3,619,291	-				-0.1
3,619,291	-				+0.3
3,619,291	-				+0.1
3,619,291	-				-0.9
3,619,291	-				+0.3
3,619,291	-				+0.3
3,619,291	-				+0.1
3,619,502	+		AO356_16015	0.10	-0.1
3,619,502	+		AO356_16015	0.10	-0.3
3,619,502	+		AO356_16015	0.10	+0.4
3,619,503	-		AO356_16015	0.10	-0.7
3,619,524	-		AO356_16015	0.12	+0.2
3,619,524	-		AO356_16015	0.12	+0.3
3,619,524	-		AO356_16015	0.12	-0.2
3,619,559	+		AO356_16015	0.14	-1.1
3,619,559	+		AO356_16015	0.14	-0.2
3,619,559	+		AO356_16015	0.14	-0.9
3,619,560	-		AO356_16015	0.14	-0.6
3,619,993	-		AO356_16015	0.39	-0.4
3,620,002	-		AO356_16015	0.40	+0.5
3,620,015	+		AO356_16015	0.40	-0.1
3,620,016	-		AO356_16015	0.40	-1.2
3,620,093	+		AO356_16015	0.45	+0.4
3,620,093	+		AO356_16015	0.45	-0.1
3,620,093	+		AO356_16015	0.45	+0.1
3,620,093	+		AO356_16015	0.45	+0.6
3,620,093	+		AO356_16015	0.45	+0.8
3,620,093	+		AO356_16015	0.45	-1.4
3,620,093	+		AO356_16015	0.45	+0.2
3,620,093	+		AO356_16015	0.45	-1.1
3,620,093	+		AO356_16015	0.45	-0.6
3,620,093	+		AO356_16015	0.45	-1.3
3,620,093	+		AO356_16015	0.45	+0.4
3,620,094	-		AO356_16015	0.45	-0.4
3,620,094	-		AO356_16015	0.45	+0.2
3,620,094	-		AO356_16015	0.45	-0.9
3,620,094	-		AO356_16015	0.45	-0.4
3,620,094	-		AO356_16015	0.45	+0.2
3,620,094	-		AO356_16015	0.45	+0.1
3,620,094	-		AO356_16015	0.45	+0.2
3,620,094	-		AO356_16015	0.45	+0.4
3,620,094	-		AO356_16015	0.45	+0.6
3,620,094	-		AO356_16015	0.45	-0.4
3,620,094	-		AO356_16015	0.45	+0.2
3,620,094	-		AO356_16015	0.45	+0.0
3,620,284	-		AO356_16015	0.56	-0.5
3,620,284	-		AO356_16015	0.56	-1.7
3,620,284	-		AO356_16015	0.56	+0.5
3,620,402	+		AO356_16015	0.63	+0.4
3,620,403	-		AO356_16015	0.63	-0.6
3,620,403	-		AO356_16015	0.63	+1.0
3,620,403	-		AO356_16015	0.63	+0.4
3,620,595	+		AO356_16015	0.74	-0.1
3,620,595	+		AO356_16015	0.74	-0.2
3,620,596	-		AO356_16015	0.74	+0.6
3,620,596	-		AO356_16015	0.74	+0.1
3,620,596	-		AO356_16015	0.74	+0.4
3,620,645	-		AO356_16015	0.77	-0.4
3,620,645	-		AO356_16015	0.77	+0.9
3,620,674	-		AO356_16015	0.79	+0.4
3,620,912	+				+0.4
3,620,912	+				+0.2
3,620,912	+				+0.9
3,620,912	+				-0.1
3,620,912	+				-0.3
3,620,912	+				+0.0
3,620,913	-				-0.1
3,620,913	-				+0.0
3,620,913	-				+0.2
3,620,951	+				+0.4
3,620,951	+				+0.7
3,620,952	-				+0.1
3,620,952	-				-0.9
3,621,064	+				+0.7
3,621,064	+				+0.1
3,621,064	+				-0.8
3,621,064	+				-0.1
3,621,064	+				+0.6
3,621,064	+				-0.7
3,621,064	+				-0.6
3,621,064	+				-0.1
3,621,064	+				+0.6
3,621,064	+				+0.7
3,621,065	-				+0.3
3,621,065	-				-0.3
3,621,065	-				-0.6
3,621,065	-				+1.3
3,621,065	-				+0.4
3,621,065	-				+0.4
3,621,065	-				-0.2
3,621,065	-				-0.4
3,621,065	-				+0.6
3,621,065	-				+0.5
3,621,066	+				+0.3
3,621,066	+				-1.0
3,621,066	+				+0.3
3,621,066	+				+0.3
3,621,067	-				-0.3
3,621,067	-				+0.6
3,621,067	-				-0.4
3,621,067	-				-0.0
3,621,071	+				-0.2
3,621,071	+				-0.2
3,621,072	-				+0.6
3,621,072	-				-0.8
3,621,123	+				-1.0
3,621,123	+				-0.5
3,621,124	-				+0.2
3,621,140	+				-0.0
3,621,141	-				-0.1
3,621,141	-				-0.8
3,621,173	+				+0.1
3,621,256	+				+0.6
3,621,256	+				+0.4
3,621,256	+				+0.1
3,621,256	+				-2.3
3,621,256	+				-0.7
3,621,256	+				-0.0
3,621,257	-				-0.0
3,621,257	-				-0.4
3,621,257	-				+0.7
3,621,257	-				+0.1
3,621,257	-				+0.8
3,621,257	-				-0.2
3,621,257	-				-1.8
3,621,262	+				-0.0
3,621,262	+				+0.9
3,621,263	-				+0.3
3,621,263	-				+0.5
3,621,263	-				+1.2
3,621,263	-				-0.4
3,621,277	+				+0.7
3,621,277	+				+1.1
3,621,278	-				+1.3
3,621,345	-		AO356_16020	0.21	+1.4
3,621,353	+		AO356_16020	0.23	-0.8
3,621,353	+		AO356_16020	0.23	-0.9
3,621,354	-		AO356_16020	0.24	+0.1
3,621,354	-		AO356_16020	0.24	-0.1
3,621,408	+		AO356_16020	0.37	-1.8
3,621,409	-		AO356_16020	0.37	+1.0
3,621,409	-		AO356_16020	0.37	+0.2
3,621,413	+		AO356_16020	0.38	-0.1
3,621,413	+		AO356_16020	0.38	+0.6
3,621,414	-		AO356_16020	0.38	-0.4
3,621,475	+		AO356_16020	0.53	+0.8
3,621,475	+		AO356_16020	0.53	+1.2
3,621,476	-		AO356_16020	0.53	-0.2
3,621,476	-		AO356_16020	0.53	-0.8
3,621,476	-		AO356_16020	0.53	+0.4
3,621,476	-		AO356_16020	0.53	+0.4
3,621,476	-		AO356_16020	0.53	-1.3
3,621,476	-		AO356_16020	0.53	+0.5
3,621,476	-		AO356_16020	0.53	-1.1
3,621,538	+		AO356_16020	0.68	+0.5
3,621,539	-		AO356_16020	0.69	+0.3
3,621,622	+		AO356_16020	0.89	-1.2
3,621,622	+		AO356_16020	0.89	+1.4
3,621,622	+		AO356_16020	0.89	-0.5
3,621,623	-		AO356_16020	0.89	+0.1
3,621,623	-		AO356_16020	0.89	-0.8
3,621,623	-		AO356_16020	0.89	+0.3
3,621,623	-		AO356_16020	0.89	-1.6
3,621,623	-		AO356_16020	0.89	+0.2
3,621,706	-				+0.9
3,621,730	-				-0.5
3,621,730	-				+1.4
3,621,839	-				+0.5
3,621,873	-				+0.1
3,621,929	+				+0.3
3,621,930	-				-0.8
3,621,930	-				+0.9
3,621,930	-				+0.5
3,621,935	+				-0.6
3,621,935	+				-0.2
3,621,935	+				-2.8
3,621,936	-				-0.2
3,621,936	-				+0.3
3,621,950	+				+0.1
3,621,950	+				-0.5
3,622,031	+		AO356_16025	0.27	-0.5
3,622,031	+		AO356_16025	0.27	+0.3
3,622,031	+		AO356_16025	0.27	-2.3
3,622,031	+		AO356_16025	0.27	-0.1
3,622,031	+		AO356_16025	0.27	-0.3
3,622,031	+		AO356_16025	0.27	-1.1
3,622,032	-		AO356_16025	0.27	+0.4
3,622,032	-		AO356_16025	0.27	-0.1
3,622,032	-		AO356_16025	0.27	-0.3
3,622,032	-		AO356_16025	0.27	+0.4
3,622,032	-		AO356_16025	0.27	-0.6
3,622,032	-		AO356_16025	0.27	-0.6
3,622,032	-		AO356_16025	0.27	+0.2
3,622,032	-		AO356_16025	0.27	-0.8