Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003215

Experiment: 4-Hydroxybenzoic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C)
3,634,621	+				+2.0
3,634,621	+				+1.0
3,634,651	+				-0.2
3,634,651	+				-0.3
3,634,651	+				-0.4
3,634,651	+				+2.6
3,634,651	+				-0.1
3,634,652	-				+0.7
3,634,652	-				-3.3
3,634,652	-				-0.0
3,634,652	-				-0.7
3,634,652	-				-0.8
3,634,652	-				-0.5
3,634,652	-				+0.7
3,634,652	-				-0.0
3,634,652	-				+0.3
3,634,715	-				-1.8
3,634,716	+				-1.8
3,634,716	+				+2.4
3,634,716	+				-0.4
3,634,717	-				-0.1
3,634,717	-				-1.3
3,634,717	-				-0.5
3,634,717	-				-0.9
3,634,738	+				-0.9
3,634,738	+				-0.5
3,634,769	+				-1.4
3,634,769	+				-1.6
3,634,769	+				-1.4
3,635,573	-				-1.8
3,635,704	+		ABIE53_003215	0.15	-0.0
3,635,704	+		ABIE53_003215	0.15	+0.3
3,635,704	+		ABIE53_003215	0.15	-1.4
3,635,758	-		ABIE53_003215	0.23	-1.5
3,635,758	-		ABIE53_003215	0.23	-1.9
3,635,758	-		ABIE53_003215	0.23	+0.3
3,635,814	+		ABIE53_003215	0.31	-0.0
3,635,814	+		ABIE53_003215	0.31	+0.1
3,635,814	+		ABIE53_003215	0.31	+0.6
3,635,814	+		ABIE53_003215	0.31	+0.4
3,635,814	+		ABIE53_003215	0.31	-0.6
3,635,815	-		ABIE53_003215	0.31	-1.6
3,635,815	-		ABIE53_003215	0.31	-0.0
3,635,815	-		ABIE53_003215	0.31	+0.5
3,635,815	-		ABIE53_003215	0.31	+0.8
3,635,815	-		ABIE53_003215	0.31	+0.3
3,635,815	-		ABIE53_003215	0.31	-1.7
3,635,815	-		ABIE53_003215	0.31	-1.3
3,635,815	-		ABIE53_003215	0.31	-0.8
3,635,815	-		ABIE53_003215	0.31	-1.8
3,635,815	-		ABIE53_003215	0.31	-1.0
3,635,878	-		ABIE53_003215	0.40	-0.3
3,635,878	-		ABIE53_003215	0.40	+0.8
3,635,892	+		ABIE53_003215	0.42	+0.5
3,635,892	+		ABIE53_003215	0.42	+0.2
3,635,892	+		ABIE53_003215	0.42	-0.8
3,635,892	+		ABIE53_003215	0.42	+0.1
3,635,892	+		ABIE53_003215	0.42	-0.9
3,635,893	-		ABIE53_003215	0.42	-1.0
3,635,893	-		ABIE53_003215	0.42	-1.4
3,635,893	-		ABIE53_003215	0.42	-0.3
3,635,893	-		ABIE53_003215	0.42	-0.6
3,635,931	+		ABIE53_003215	0.48	+0.2
3,635,932	-		ABIE53_003215	0.48	-1.4
3,635,973	+		ABIE53_003215	0.54	+1.1
3,635,973	+		ABIE53_003215	0.54	+3.1
3,635,973	+		ABIE53_003215	0.54	-1.1
3,635,973	+		ABIE53_003215	0.54	+0.1
3,635,973	+		ABIE53_003215	0.54	+0.3
3,635,973	+		ABIE53_003215	0.54	-0.8
3,635,973	+		ABIE53_003215	0.54	-0.2
3,635,973	+		ABIE53_003215	0.54	-0.1
3,635,973	+		ABIE53_003215	0.54	-0.2
3,635,973	+		ABIE53_003215	0.54	-1.3
3,635,974	-		ABIE53_003215	0.54	+0.7
3,635,974	-		ABIE53_003215	0.54	+0.4
3,635,974	-		ABIE53_003215	0.54	+1.8
3,635,974	-		ABIE53_003215	0.54	-1.7
3,635,974	-		ABIE53_003215	0.54	-0.2
3,635,974	-		ABIE53_003215	0.54	-1.4
3,635,974	-		ABIE53_003215	0.54	-3.3
3,635,974	-		ABIE53_003215	0.54	-0.2
3,635,976	+		ABIE53_003215	0.54	-0.6
3,635,976	+		ABIE53_003215	0.54	-0.6
3,635,977	-		ABIE53_003215	0.54	-0.8
3,636,018	+		ABIE53_003215	0.60	+1.0
3,636,019	-		ABIE53_003215	0.60	-1.3
3,636,019	-		ABIE53_003215	0.60	-0.0
3,636,036	+		ABIE53_003215	0.63	+1.4
3,636,036	+		ABIE53_003215	0.63	+0.3
3,636,105	+		ABIE53_003215	0.73	-0.9
3,636,105	+		ABIE53_003215	0.73	-0.9
3,636,105	+		ABIE53_003215	0.73	-0.1
3,636,105	+		ABIE53_003215	0.73	-2.1
3,636,105	+		ABIE53_003215	0.73	-0.1
3,636,105	+		ABIE53_003215	0.73	-1.1
3,636,105	+		ABIE53_003215	0.73	+1.0
3,636,105	+		ABIE53_003215	0.73	+0.3
3,636,105	+		ABIE53_003215	0.73	+1.4
3,636,105	+		ABIE53_003215	0.73	+1.8
3,636,105	+		ABIE53_003215	0.73	+0.1
3,636,105	+		ABIE53_003215	0.73	-0.4
3,636,105	+		ABIE53_003215	0.73	-0.2
3,636,105	+		ABIE53_003215	0.73	-2.0
3,636,106	-		ABIE53_003215	0.73	-1.8
3,636,106	-		ABIE53_003215	0.73	+1.6
3,636,106	-		ABIE53_003215	0.73	-0.8
3,636,106	-		ABIE53_003215	0.73	-1.9
3,636,106	-		ABIE53_003215	0.73	+1.1
3,636,106	-		ABIE53_003215	0.73	-0.7
3,636,106	-		ABIE53_003215	0.73	-0.4
3,636,106	-		ABIE53_003215	0.73	+0.0
3,636,106	-		ABIE53_003215	0.73	+1.0
3,636,106	-		ABIE53_003215	0.73	-1.6
3,636,106	-		ABIE53_003215	0.73	-0.2
3,636,106	-		ABIE53_003215	0.73	-0.0
3,636,106	-		ABIE53_003215	0.73	+1.6
3,636,106	-		ABIE53_003215	0.73	+1.0
3,636,106	-		ABIE53_003215	0.73	-0.7
3,636,106	-		ABIE53_003215	0.73	-1.3
3,636,156	+		ABIE53_003215	0.80	-0.1
3,636,156	+		ABIE53_003215	0.80	-1.4
3,636,156	+		ABIE53_003215	0.80	+1.6
3,636,156	+		ABIE53_003215	0.80	-1.2
3,636,156	+		ABIE53_003215	0.80	+1.0
3,636,156	+		ABIE53_003215	0.80	-1.2
3,636,157	-		ABIE53_003215	0.80	-0.5
3,636,216	+		ABIE53_003215	0.89	-1.0
3,636,216	+		ABIE53_003215	0.89	-0.7
3,636,216	+		ABIE53_003215	0.89	+0.2
3,636,216	+		ABIE53_003215	0.89	-1.5
3,636,216	+		ABIE53_003215	0.89	+1.6
3,636,216	+		ABIE53_003215	0.89	-1.5
3,636,217	-		ABIE53_003215	0.89	+0.3
3,636,217	-		ABIE53_003215	0.89	-1.4
3,636,217	-		ABIE53_003215	0.89	-0.8
3,636,217	-		ABIE53_003215	0.89	+0.6
3,636,217	-		ABIE53_003215	0.89	+0.1
3,636,217	-		ABIE53_003215	0.89	+1.6
3,636,217	-		ABIE53_003215	0.89	+2.4
3,636,217	-		ABIE53_003215	0.89	+0.3
3,636,217	-		ABIE53_003215	0.89	-0.5
3,636,283	+				+0.7
3,636,283	+				+0.1
3,636,283	+				-0.9
3,636,283	+				+0.6
3,636,284	-				+1.6
3,636,284	-				+1.0
3,636,300	+				-0.1
3,636,300	+				-0.4
3,636,301	-				-1.8
3,636,301	-				+0.3
3,636,301	-				-0.3
3,636,338	+				-0.6
3,636,338	+				-0.6
3,636,338	+				-0.8
3,636,338	+				+0.2
3,636,338	+				-0.9
3,636,338	+				-0.1
3,636,338	+				-0.8
3,636,338	+				+1.4
3,636,338	+				+1.9
3,636,338	+				-0.1
3,636,338	+				-0.7
3,636,338	+				+2.0
3,636,338	+				+0.2
3,636,338	+				-1.2
3,636,338	+				+0.6
3,636,339	-				-0.0
3,636,339	-				+0.6
3,636,339	-				+0.6
3,636,339	-				+0.6
3,636,339	-				-0.2
3,636,339	-				-0.2
3,636,339	-				+0.5
3,636,339	-				-0.2
3,636,339	-				-0.8
3,636,339	-				+1.2
3,636,339	-				+1.6
3,636,339	-				+0.6
3,636,339	-				-0.9
3,636,339	-				-0.6
3,636,339	-				-0.0
3,636,342	+				+0.2
3,636,342	+				-0.7
3,636,342	+				-2.5
3,636,342	+				+1.7
3,636,342	+				-2.4
3,636,342	+				-0.0
3,636,342	+				+0.0
3,636,342	+				+0.2
3,636,342	+				+2.3
3,636,342	+				-0.0
3,636,342	+				+0.4
3,636,343	-				-0.6
3,636,343	-				+0.2
3,636,343	-				+0.0
3,636,343	-				-2.4
3,636,343	-				+2.9
3,636,343	-				-1.0
3,636,343	-				+0.6
3,636,343	-				+1.0
3,636,343	-				+2.1
3,636,343	-				-0.4
3,636,493	+				-0.3
3,636,493	+				-2.6
3,636,493	+				-0.6
3,636,493	+				+0.6
3,636,493	+				-0.4
3,636,493	+				+0.1
3,636,493	+				+0.4
3,636,493	+				+0.2
3,636,494	-				+1.0
3,636,494	-				-0.1
3,636,494	-				-0.2
3,636,494	-				-0.7
3,636,494	-				+1.6
3,636,494	-				-0.4
3,636,494	-				+0.6
3,636,494	-				+2.0
3,636,494	-				-0.4
3,636,494	-				-2.0
3,636,494	-				+1.7
3,636,494	-				+1.6
3,636,555	+				-0.6
3,636,556	+				+0.6
3,636,608	+				-0.0
3,636,608	+				+0.6
3,636,609	-				+0.3
3,636,678	+				+0.2
3,636,678	+				+0.7
3,636,678	+				+1.6
3,636,679	-				-0.0
3,636,886	+		ABIE53_003216	0.14	-0.3
3,636,886	+		ABIE53_003216	0.14	-1.3
3,636,886	+		ABIE53_003216	0.14	-0.1
3,636,886	+		ABIE53_003216	0.14	+0.1
3,636,887	-		ABIE53_003216	0.14	+2.2
3,636,887	-		ABIE53_003216	0.14	+0.1
3,636,905	+		ABIE53_003216	0.15	-1.4
3,636,905	+		ABIE53_003216	0.15	+2.8
3,636,905	+		ABIE53_003216	0.15	+0.5
3,636,905	+		ABIE53_003216	0.15	-0.9
3,636,905	+		ABIE53_003216	0.15	+1.6
3,636,905	+		ABIE53_003216	0.15	+0.0
3,636,905	+		ABIE53_003216	0.15	+0.5
3,636,905	+		ABIE53_003216	0.15	+1.4
3,636,905	+		ABIE53_003216	0.15	-1.9
3,636,906	-		ABIE53_003216	0.15	+2.3
3,636,906	-		ABIE53_003216	0.15	-0.9
3,636,906	-		ABIE53_003216	0.15	+1.0
3,636,906	-		ABIE53_003216	0.15	+0.3
3,636,906	-		ABIE53_003216	0.15	-0.7
3,636,906	-		ABIE53_003216	0.15	+0.6
3,636,906	-		ABIE53_003216	0.15	-0.4
3,636,906	-		ABIE53_003216	0.15	+0.3
3,636,906	-		ABIE53_003216	0.15	-0.4
3,636,906	-		ABIE53_003216	0.15	-0.8
3,636,906	-		ABIE53_003216	0.15	-0.8
3,636,906	-		ABIE53_003216	0.15	-1.4
3,636,906	-		ABIE53_003216	0.15	+1.0
3,636,965	+		ABIE53_003216	0.17	+1.7
3,636,965	+		ABIE53_003216	0.17	-0.9
3,636,965	+		ABIE53_003216	0.17	+0.6
3,636,965	+		ABIE53_003216	0.17	-0.0
3,636,965	+		ABIE53_003216	0.17	-0.0
3,636,965	+		ABIE53_003216	0.17	+0.6
3,636,966	-		ABIE53_003216	0.17	+2.3
3,636,966	-		ABIE53_003216	0.17	-1.0
3,636,966	-		ABIE53_003216	0.17	-0.2
3,636,966	-		ABIE53_003216	0.17	+0.6
3,636,966	-		ABIE53_003216	0.17	-0.2
3,636,966	-		ABIE53_003216	0.17	-0.0
3,636,966	-		ABIE53_003216	0.17	-0.0
3,636,966	-		ABIE53_003216	0.17	-0.3
3,636,966	-		ABIE53_003216	0.17	-1.8
3,636,998	+		ABIE53_003216	0.18	+0.6
3,636,998	+		ABIE53_003216	0.18	-0.0
3,636,998	+		ABIE53_003216	0.18	-0.5
3,636,998	+		ABIE53_003216	0.18	-0.0
3,636,999	-		ABIE53_003216	0.18	-0.9
3,636,999	-		ABIE53_003216	0.18	-1.8
3,636,999	-		ABIE53_003216	0.18	+3.1
3,636,999	-		ABIE53_003216	0.18	+1.0
3,637,130	+		ABIE53_003216	0.23	-0.1
3,637,130	+		ABIE53_003216	0.23	-0.4
3,637,130	+		ABIE53_003216	0.23	+0.6
3,637,130	+		ABIE53_003216	0.23	+0.8
3,637,130	+		ABIE53_003216	0.23	+1.3
3,637,131	-		ABIE53_003216	0.23	+0.3
3,637,131	-		ABIE53_003216	0.23	-0.4