Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS02345 and ABIE51_RS02350 are separated by 69 nucleotides ABIE51_RS02350 and ABIE51_RS02355 are separated by 340 nucleotides ABIE51_RS02355 and ABIE51_RS02360 are separated by 111 nucleotides
ABIE51_RS02345: ABIE51_RS02345 - GH92 family glycosyl hydrolase, at 525,827 to 528,184
_RS02345
ABIE51_RS02350: ABIE51_RS02350 - tRNA-Ile, at 528,254 to 528,326
_RS02350
ABIE51_RS02355: ABIE51_RS02355 - hypothetical protein, at 528,667 to 529,134
_RS02355
ABIE51_RS02360: ABIE51_RS02360 - hypothetical protein, at 529,246 to 530,103
_RS02360
Position (kb) 528
529
530 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 527.706 kb on - strand, within ABIE51_RS02345 at 527.741 kb on + strand, within ABIE51_RS02345 at 527.742 kb on - strand, within ABIE51_RS02345 at 527.753 kb on + strand, within ABIE51_RS02345 at 527.753 kb on + strand, within ABIE51_RS02345 at 527.811 kb on - strand, within ABIE51_RS02345 at 527.870 kb on + strand, within ABIE51_RS02345 at 527.870 kb on + strand, within ABIE51_RS02345 at 527.870 kb on + strand, within ABIE51_RS02345 at 527.871 kb on - strand, within ABIE51_RS02345 at 527.871 kb on - strand, within ABIE51_RS02345 at 527.871 kb on - strand, within ABIE51_RS02345 at 527.871 kb on - strand, within ABIE51_RS02345 at 527.895 kb on - strand, within ABIE51_RS02345 at 527.895 kb on - strand, within ABIE51_RS02345 at 527.895 kb on - strand, within ABIE51_RS02345 at 527.921 kb on + strand, within ABIE51_RS02345 at 527.921 kb on + strand, within ABIE51_RS02345 at 527.921 kb on + strand, within ABIE51_RS02345 at 527.922 kb on - strand, within ABIE51_RS02345 at 528.020 kb on + strand at 528.020 kb on + strand at 528.020 kb on + strand at 528.020 kb on + strand at 528.021 kb on - strand at 528.021 kb on - strand at 528.021 kb on - strand at 528.021 kb on - strand at 528.021 kb on - strand at 528.237 kb on + strand at 528.238 kb on - strand at 528.366 kb on + strand at 528.367 kb on - strand at 528.367 kb on - strand at 528.390 kb on + strand at 528.390 kb on + strand at 528.390 kb on + strand at 528.391 kb on - strand at 528.391 kb on - strand at 528.391 kb on - strand at 528.391 kb on - strand at 528.391 kb on - strand at 528.391 kb on - strand at 528.391 kb on - strand at 528.391 kb on - strand at 528.391 kb on - strand at 528.391 kb on - strand at 528.410 kb on - strand at 528.423 kb on - strand at 528.423 kb on - strand at 528.431 kb on - strand at 528.442 kb on + strand at 528.442 kb on + strand at 528.443 kb on - strand at 528.488 kb on - strand at 528.488 kb on - strand at 528.488 kb on - strand at 528.498 kb on + strand at 528.499 kb on - strand at 528.499 kb on - strand at 528.514 kb on + strand at 528.530 kb on + strand at 528.531 kb on - strand at 528.533 kb on + strand at 528.533 kb on + strand at 528.534 kb on - strand at 528.534 kb on - strand at 528.534 kb on - strand at 528.534 kb on - strand at 528.534 kb on - strand at 528.537 kb on + strand at 528.537 kb on + strand at 528.537 kb on + strand at 528.537 kb on + strand at 528.537 kb on + strand at 528.537 kb on + strand at 528.537 kb on + strand at 528.537 kb on + strand at 528.538 kb on - strand at 528.550 kb on - strand at 528.573 kb on + strand at 528.574 kb on - strand at 528.574 kb on - strand at 528.574 kb on - strand at 528.609 kb on - strand at 528.630 kb on - strand at 528.630 kb on - strand at 528.632 kb on + strand at 528.632 kb on + strand at 528.632 kb on + strand at 528.632 kb on + strand at 528.632 kb on + strand at 528.633 kb on - strand at 528.633 kb on - strand at 528.633 kb on - strand at 528.652 kb on + strand at 528.652 kb on + strand at 528.653 kb on - strand at 528.653 kb on - strand at 528.673 kb on + strand at 528.673 kb on + strand at 528.674 kb on - strand at 528.674 kb on - strand at 528.674 kb on - strand at 528.676 kb on + strand at 528.676 kb on + strand at 528.676 kb on + strand at 528.676 kb on + strand at 528.676 kb on + strand at 528.677 kb on - strand at 528.740 kb on + strand, within ABIE51_RS02355 at 528.740 kb on + strand, within ABIE51_RS02355 at 528.741 kb on - strand, within ABIE51_RS02355 at 528.749 kb on + strand, within ABIE51_RS02355 at 528.749 kb on + strand, within ABIE51_RS02355 at 528.772 kb on + strand, within ABIE51_RS02355 at 528.773 kb on - strand, within ABIE51_RS02355 at 528.849 kb on + strand, within ABIE51_RS02355 at 528.849 kb on + strand, within ABIE51_RS02355 at 528.850 kb on - strand, within ABIE51_RS02355 at 528.861 kb on + strand, within ABIE51_RS02355 at 528.861 kb on + strand, within ABIE51_RS02355 at 528.861 kb on + strand, within ABIE51_RS02355 at 528.861 kb on + strand, within ABIE51_RS02355 at 528.862 kb on - strand, within ABIE51_RS02355 at 528.862 kb on - strand, within ABIE51_RS02355 at 528.862 kb on - strand, within ABIE51_RS02355 at 528.862 kb on - strand, within ABIE51_RS02355 at 528.876 kb on + strand, within ABIE51_RS02355 at 528.877 kb on - strand, within ABIE51_RS02355 at 529.050 kb on - strand, within ABIE51_RS02355 at 529.082 kb on + strand, within ABIE51_RS02355 at 529.094 kb on + strand at 529.094 kb on + strand at 529.095 kb on - strand at 529.148 kb on + strand at 529.304 kb on + strand at 529.305 kb on - strand at 529.324 kb on + strand at 529.325 kb on - strand at 529.336 kb on + strand, within ABIE51_RS02360 at 529.337 kb on - strand, within ABIE51_RS02360 at 529.337 kb on - strand, within ABIE51_RS02360 at 529.337 kb on - strand, within ABIE51_RS02360 at 529.462 kb on + strand, within ABIE51_RS02360 at 529.462 kb on + strand, within ABIE51_RS02360 at 529.462 kb on + strand, within ABIE51_RS02360 at 529.463 kb on - strand, within ABIE51_RS02360 at 529.463 kb on - strand, within ABIE51_RS02360 at 529.533 kb on + strand, within ABIE51_RS02360 at 529.533 kb on + strand, within ABIE51_RS02360 at 529.534 kb on - strand, within ABIE51_RS02360 at 529.534 kb on - strand, within ABIE51_RS02360 at 529.534 kb on - strand, within ABIE51_RS02360 at 529.542 kb on - strand, within ABIE51_RS02360 at 529.542 kb on - strand, within ABIE51_RS02360 at 529.542 kb on - strand, within ABIE51_RS02360 at 529.542 kb on - strand, within ABIE51_RS02360 at 529.581 kb on - strand, within ABIE51_RS02360 at 529.586 kb on + strand, within ABIE51_RS02360 at 529.587 kb on - strand, within ABIE51_RS02360 at 529.587 kb on - strand, within ABIE51_RS02360 at 529.587 kb on - strand, within ABIE51_RS02360 at 529.587 kb on - strand, within ABIE51_RS02360 at 529.587 kb on - strand, within ABIE51_RS02360 at 529.587 kb on - strand, within ABIE51_RS02360 at 529.622 kb on + strand, within ABIE51_RS02360 at 529.693 kb on + strand, within ABIE51_RS02360 at 529.696 kb on + strand, within ABIE51_RS02360 at 529.697 kb on - strand, within ABIE51_RS02360 at 529.697 kb on - strand, within ABIE51_RS02360 at 529.697 kb on - strand, within ABIE51_RS02360 at 529.697 kb on - strand, within ABIE51_RS02360 at 529.697 kb on - strand, within ABIE51_RS02360 at 529.697 kb on - strand, within ABIE51_RS02360 at 529.697 kb on - strand, within ABIE51_RS02360 at 529.697 kb on - strand, within ABIE51_RS02360 at 529.705 kb on + strand, within ABIE51_RS02360 at 529.709 kb on + strand, within ABIE51_RS02360 at 529.709 kb on + strand, within ABIE51_RS02360 at 529.709 kb on + strand, within ABIE51_RS02360 at 529.709 kb on + strand, within ABIE51_RS02360 at 529.709 kb on + strand, within ABIE51_RS02360 at 529.710 kb on - strand, within ABIE51_RS02360 at 529.710 kb on - strand, within ABIE51_RS02360 at 529.710 kb on - strand, within ABIE51_RS02360 at 529.710 kb on - strand, within ABIE51_RS02360 at 529.710 kb on - strand, within ABIE51_RS02360 at 529.775 kb on + strand, within ABIE51_RS02360 at 529.776 kb on - strand, within ABIE51_RS02360 at 529.849 kb on - strand, within ABIE51_RS02360 at 529.937 kb on + strand, within ABIE51_RS02360 at 529.937 kb on + strand, within ABIE51_RS02360 at 529.938 kb on - strand, within ABIE51_RS02360 at 529.943 kb on + strand, within ABIE51_RS02360 at 529.943 kb on + strand, within ABIE51_RS02360 at 529.943 kb on + strand, within ABIE51_RS02360 at 529.943 kb on + strand, within ABIE51_RS02360 at 529.944 kb on - strand, within ABIE51_RS02360 at 529.944 kb on - strand, within ABIE51_RS02360 at 529.953 kb on + strand, within ABIE51_RS02360 at 529.954 kb on - strand, within ABIE51_RS02360 at 530.086 kb on + strand at 530.086 kb on + strand at 530.086 kb on + strand at 530.086 kb on + strand at 530.087 kb on - strand at 530.087 kb on - strand at 530.123 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 527,706 - ABIE51_RS02345 0.80 +0.5 527,741 + ABIE51_RS02345 0.81 -0.3 527,742 - ABIE51_RS02345 0.81 -0.7 527,753 + ABIE51_RS02345 0.82 -0.2 527,753 + ABIE51_RS02345 0.82 -1.1 527,811 - ABIE51_RS02345 0.84 -0.3 527,870 + ABIE51_RS02345 0.87 -0.9 527,870 + ABIE51_RS02345 0.87 +2.3 527,870 + ABIE51_RS02345 0.87 +0.0 527,871 - ABIE51_RS02345 0.87 +0.1 527,871 - ABIE51_RS02345 0.87 -0.2 527,871 - ABIE51_RS02345 0.87 +0.6 527,871 - ABIE51_RS02345 0.87 +0.9 527,895 - ABIE51_RS02345 0.88 -0.6 527,895 - ABIE51_RS02345 0.88 -1.0 527,895 - ABIE51_RS02345 0.88 -0.1 527,921 + ABIE51_RS02345 0.89 -0.4 527,921 + ABIE51_RS02345 0.89 -0.4 527,921 + ABIE51_RS02345 0.89 +0.4 527,922 - ABIE51_RS02345 0.89 +0.2 528,020 + -0.7 528,020 + +0.3 528,020 + -0.0 528,020 + +0.0 528,021 - -0.3 528,021 - -0.2 528,021 - +0.6 528,021 - +1.3 528,021 - +0.3 528,237 + +0.7 528,238 - -0.5 528,366 + +0.5 528,367 - -0.8 528,367 - +1.3 528,390 + -0.3 528,390 + -1.0 528,390 + +0.1 528,391 - +0.5 528,391 - -0.9 528,391 - +2.5 528,391 - +0.1 528,391 - -1.2 528,391 - -0.8 528,391 - +0.7 528,391 - -0.8 528,391 - +0.5 528,391 - +0.8 528,410 - -2.6 528,423 - -0.6 528,423 - +1.2 528,431 - +0.7 528,442 + +0.2 528,442 + +0.5 528,443 - -0.2 528,488 - +0.4 528,488 - -0.4 528,488 - +1.1 528,498 + +0.2 528,499 - +0.0 528,499 - -0.9 528,514 + -0.3 528,530 + -0.1 528,531 - -0.1 528,533 + -0.7 528,533 + +3.5 528,534 - -0.9 528,534 - +2.7 528,534 - -0.0 528,534 - -0.1 528,534 - -0.9 528,537 + -0.2 528,537 + +0.1 528,537 + -0.5 528,537 + -0.9 528,537 + -1.2 528,537 + -0.6 528,537 + -0.8 528,537 + +1.1 528,538 - -0.2 528,550 - -0.8 528,573 + +0.6 528,574 - +1.0 528,574 - -0.8 528,574 - +0.1 528,609 - +1.1 528,630 - -0.5 528,630 - +1.1 528,632 + +0.3 528,632 + -0.3 528,632 + -0.3 528,632 + +0.6 528,632 + -0.5 528,633 - +0.4 528,633 - +0.5 528,633 - -1.3 528,652 + -0.4 528,652 + -0.1 528,653 - -0.0 528,653 - -0.3 528,673 + +0.0 528,673 + -0.2 528,674 - +1.4 528,674 - -0.2 528,674 - -1.2 528,676 + +0.3 528,676 + -0.7 528,676 + +0.1 528,676 + -0.1 528,676 + -0.0 528,677 - +0.1 528,740 + ABIE51_RS02355 0.16 -0.0 528,740 + ABIE51_RS02355 0.16 +0.5 528,741 - ABIE51_RS02355 0.16 -2.0 528,749 + ABIE51_RS02355 0.18 -0.7 528,749 + ABIE51_RS02355 0.18 -0.2 528,772 + ABIE51_RS02355 0.22 +0.8 528,773 - ABIE51_RS02355 0.23 -0.8 528,849 + ABIE51_RS02355 0.39 -0.4 528,849 + ABIE51_RS02355 0.39 +1.2 528,850 - ABIE51_RS02355 0.39 -1.6 528,861 + ABIE51_RS02355 0.41 -0.1 528,861 + ABIE51_RS02355 0.41 +0.3 528,861 + ABIE51_RS02355 0.41 +0.5 528,861 + ABIE51_RS02355 0.41 +0.0 528,862 - ABIE51_RS02355 0.42 +0.1 528,862 - ABIE51_RS02355 0.42 -0.6 528,862 - ABIE51_RS02355 0.42 +0.8 528,862 - ABIE51_RS02355 0.42 -2.8 528,876 + ABIE51_RS02355 0.45 -0.1 528,877 - ABIE51_RS02355 0.45 -1.3 529,050 - ABIE51_RS02355 0.82 -0.8 529,082 + ABIE51_RS02355 0.89 +0.2 529,094 + -0.0 529,094 + +0.5 529,095 - +1.3 529,148 + +0.3 529,304 + -0.7 529,305 - -1.0 529,324 + -1.5 529,325 - -0.4 529,336 + ABIE51_RS02360 0.10 -0.2 529,337 - ABIE51_RS02360 0.11 -0.5 529,337 - ABIE51_RS02360 0.11 -0.0 529,337 - ABIE51_RS02360 0.11 -0.5 529,462 + ABIE51_RS02360 0.25 -0.4 529,462 + ABIE51_RS02360 0.25 -0.1 529,462 + ABIE51_RS02360 0.25 +1.0 529,463 - ABIE51_RS02360 0.25 +0.4 529,463 - ABIE51_RS02360 0.25 +0.8 529,533 + ABIE51_RS02360 0.33 -0.3 529,533 + ABIE51_RS02360 0.33 -0.7 529,534 - ABIE51_RS02360 0.34 -0.1 529,534 - ABIE51_RS02360 0.34 +0.5 529,534 - ABIE51_RS02360 0.34 -0.0 529,542 - ABIE51_RS02360 0.34 -0.5 529,542 - ABIE51_RS02360 0.34 +0.5 529,542 - ABIE51_RS02360 0.34 +0.1 529,542 - ABIE51_RS02360 0.34 +0.3 529,581 - ABIE51_RS02360 0.39 -0.8 529,586 + ABIE51_RS02360 0.40 -0.9 529,587 - ABIE51_RS02360 0.40 -0.1 529,587 - ABIE51_RS02360 0.40 -0.4 529,587 - ABIE51_RS02360 0.40 -0.2 529,587 - ABIE51_RS02360 0.40 +0.8 529,587 - ABIE51_RS02360 0.40 +1.2 529,587 - ABIE51_RS02360 0.40 +0.5 529,622 + ABIE51_RS02360 0.44 -0.4 529,693 + ABIE51_RS02360 0.52 +0.8 529,696 + ABIE51_RS02360 0.52 +0.2 529,697 - ABIE51_RS02360 0.53 +1.1 529,697 - ABIE51_RS02360 0.53 -0.5 529,697 - ABIE51_RS02360 0.53 -0.5 529,697 - ABIE51_RS02360 0.53 -0.2 529,697 - ABIE51_RS02360 0.53 -2.0 529,697 - ABIE51_RS02360 0.53 +0.7 529,697 - ABIE51_RS02360 0.53 +1.0 529,697 - ABIE51_RS02360 0.53 +0.5 529,705 + ABIE51_RS02360 0.53 -0.0 529,709 + ABIE51_RS02360 0.54 +0.4 529,709 + ABIE51_RS02360 0.54 -1.4 529,709 + ABIE51_RS02360 0.54 -1.2 529,709 + ABIE51_RS02360 0.54 -0.3 529,709 + ABIE51_RS02360 0.54 +0.8 529,710 - ABIE51_RS02360 0.54 +0.9 529,710 - ABIE51_RS02360 0.54 +0.1 529,710 - ABIE51_RS02360 0.54 -0.2 529,710 - ABIE51_RS02360 0.54 -0.2 529,710 - ABIE51_RS02360 0.54 +0.6 529,775 + ABIE51_RS02360 0.62 +1.1 529,776 - ABIE51_RS02360 0.62 +0.2 529,849 - ABIE51_RS02360 0.70 +0.1 529,937 + ABIE51_RS02360 0.81 -0.2 529,937 + ABIE51_RS02360 0.81 +1.0 529,938 - ABIE51_RS02360 0.81 +1.2 529,943 + ABIE51_RS02360 0.81 +0.6 529,943 + ABIE51_RS02360 0.81 -0.5 529,943 + ABIE51_RS02360 0.81 -0.5 529,943 + ABIE51_RS02360 0.81 -0.1 529,944 - ABIE51_RS02360 0.81 +1.2 529,944 - ABIE51_RS02360 0.81 -0.3 529,953 + ABIE51_RS02360 0.82 +0.3 529,954 - ABIE51_RS02360 0.83 +0.5 530,086 + +0.5 530,086 + -0.5 530,086 + +1.2 530,086 + -0.5 530,087 - -0.7 530,087 - -1.0 530,123 - -1.5
Or see this region's nucleotide sequence