Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07780

Experiment: R2A control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A control
1,689,762	+				-0.2
1,689,762	+				+1.2
1,689,762	+				-0.2
1,689,762	+				+0.1
1,689,762	+				-1.1
1,689,762	+				-0.6
1,689,762	+				-0.6
1,689,762	+				-0.3
1,689,762	+				+0.4
1,689,762	+				-0.3
1,689,762	+				-1.6
1,689,762	+				-0.2
1,689,762	+				-0.5
1,689,762	+				+0.3
1,689,762	+				-0.6
1,689,762	+				+0.1
1,689,763	-				-1.2
1,689,763	-				-1.2
1,689,763	-				-1.2
1,689,763	-				+0.1
1,689,763	-				-0.0
1,689,763	-				-0.1
1,689,763	-				-0.7
1,689,763	-				+0.1
1,689,763	-				-1.0
1,689,763	-				+0.4
1,689,763	-				-0.9
1,689,763	-				+0.1
1,689,763	-				+1.7
1,689,942	-				+1.2
1,689,942	-				+1.2
1,689,942	-				+0.6
1,690,224	+				+1.6
1,690,225	-				-0.2
1,690,227	-				+0.1
1,690,242	+				-0.9
1,690,243	-				-0.3
1,690,243	-				+1.0
1,690,244	+				-0.3
1,690,244	+				-0.1
1,690,244	+				+0.1
1,690,257	-				+0.3
1,690,286	+				+0.1
1,690,525	+		LRK54_RS07775	0.56	-2.6
1,690,525	+		LRK54_RS07775	0.56	-0.4
1,690,525	+		LRK54_RS07775	0.56	-1.4
1,690,525	+		LRK54_RS07775	0.56	-0.9
1,690,525	+		LRK54_RS07775	0.56	-0.6
1,690,525	+		LRK54_RS07775	0.56	-1.5
1,690,525	+		LRK54_RS07775	0.56	-2.0
1,690,526	-		LRK54_RS07775	0.56	-2.6
1,690,526	-		LRK54_RS07775	0.56	-1.1
1,690,526	-		LRK54_RS07775	0.56	-1.1
1,690,526	-		LRK54_RS07775	0.56	-1.8
1,690,526	-		LRK54_RS07775	0.56	-2.6
1,690,526	-		LRK54_RS07775	0.56	-3.2
1,690,526	-		LRK54_RS07775	0.56	-0.2
1,690,687	+				-2.0
1,690,687	+				-0.1
1,690,687	+				-1.0
1,690,688	-				-0.9
1,690,688	-				-0.5
1,690,688	-				-0.7
1,690,688	-				-1.3
1,690,688	-				-0.5
1,690,688	-				-0.6
1,690,688	-				-0.2
1,690,688	-				-1.4
1,691,142	+		LRK54_RS07780	0.27	-0.3
1,691,142	+		LRK54_RS07780	0.27	-0.4
1,691,142	+		LRK54_RS07780	0.27	-0.1
1,691,142	+		LRK54_RS07780	0.27	-0.3
1,691,142	+		LRK54_RS07780	0.27	+0.2
1,691,142	+		LRK54_RS07780	0.27	+0.3
1,691,142	+		LRK54_RS07780	0.27	-0.3
1,691,142	+		LRK54_RS07780	0.27	+0.2
1,691,142	+		LRK54_RS07780	0.27	+0.6
1,691,142	+		LRK54_RS07780	0.27	+0.2
1,691,142	+		LRK54_RS07780	0.27	-0.1
1,691,142	+		LRK54_RS07780	0.27	-0.2
1,691,142	+		LRK54_RS07780	0.27	+0.1
1,691,142	+		LRK54_RS07780	0.27	-0.5
1,691,142	+		LRK54_RS07780	0.27	-0.1
1,691,142	+		LRK54_RS07780	0.27	-0.3
1,691,142	+		LRK54_RS07780	0.27	-0.9
1,691,142	+		LRK54_RS07780	0.27	+0.8
1,691,142	+		LRK54_RS07780	0.27	-0.1
1,691,142	+		LRK54_RS07780	0.27	-0.0
1,691,142	+		LRK54_RS07780	0.27	-0.4
1,691,142	+		LRK54_RS07780	0.27	-0.2
1,691,142	+		LRK54_RS07780	0.27	+0.2
1,691,142	+		LRK54_RS07780	0.27	+0.5
1,691,142	+		LRK54_RS07780	0.27	-0.1
1,691,142	+		LRK54_RS07780	0.27	+0.4
1,691,142	+		LRK54_RS07780	0.27	-0.2
1,691,142	+		LRK54_RS07780	0.27	+0.3
1,691,142	+		LRK54_RS07780	0.27	-0.1
1,691,143	-		LRK54_RS07780	0.27	+0.0
1,691,143	-		LRK54_RS07780	0.27	+0.1
1,691,143	-		LRK54_RS07780	0.27	+0.3
1,691,143	-		LRK54_RS07780	0.27	-0.0
1,691,143	-		LRK54_RS07780	0.27	+0.0
1,691,143	-		LRK54_RS07780	0.27	-1.3
1,691,143	-		LRK54_RS07780	0.27	+0.3
1,691,143	-		LRK54_RS07780	0.27	+0.3
1,691,148	+		LRK54_RS07780	0.28	-1.0
1,691,286	+		LRK54_RS07780	0.37	+0.3
1,691,286	+		LRK54_RS07780	0.37	-0.3
1,691,286	+		LRK54_RS07780	0.37	-0.5
1,691,286	+		LRK54_RS07780	0.37	-0.7
1,691,286	+		LRK54_RS07780	0.37	-0.7
1,691,286	+		LRK54_RS07780	0.37	-1.0
1,691,287	-		LRK54_RS07780	0.37	+0.6
1,691,287	-		LRK54_RS07780	0.37	-1.0
1,691,287	-		LRK54_RS07780	0.37	-0.3
1,691,287	-		LRK54_RS07780	0.37	-0.4
1,691,287	-		LRK54_RS07780	0.37	-0.1
1,691,301	+		LRK54_RS07780	0.38	+0.5
1,691,766	+		LRK54_RS07780	0.70	+0.3
1,691,766	+		LRK54_RS07780	0.70	-0.8
1,691,766	+		LRK54_RS07780	0.70	-0.1
1,691,766	+		LRK54_RS07780	0.70	-0.2
1,691,766	+		LRK54_RS07780	0.70	-0.6
1,691,766	+		LRK54_RS07780	0.70	-0.1
1,691,766	+		LRK54_RS07780	0.70	+0.7
1,691,766	+		LRK54_RS07780	0.70	-0.8
1,691,766	+		LRK54_RS07780	0.70	-1.4
1,691,766	+		LRK54_RS07780	0.70	-0.9
1,691,767	-		LRK54_RS07780	0.70	-0.2
1,691,767	-		LRK54_RS07780	0.70	+0.6
1,691,767	-		LRK54_RS07780	0.70	-0.0
1,691,767	-		LRK54_RS07780	0.70	+1.0
1,691,767	-		LRK54_RS07780	0.70	-0.4
1,691,767	-		LRK54_RS07780	0.70	+0.6
1,691,767	-		LRK54_RS07780	0.70	+0.0
1,691,847	+		LRK54_RS07780	0.76	-1.2
1,691,847	+		LRK54_RS07780	0.76	+0.3
1,691,847	+		LRK54_RS07780	0.76	-0.9
1,691,847	+		LRK54_RS07780	0.76	-0.0
1,691,847	+		LRK54_RS07780	0.76	-1.3
1,691,847	+		LRK54_RS07780	0.76	-0.6
1,691,847	+		LRK54_RS07780	0.76	-0.6
1,691,847	+		LRK54_RS07780	0.76	+0.4
1,691,847	+		LRK54_RS07780	0.76	-1.5
1,691,847	+		LRK54_RS07780	0.76	-0.8
1,691,847	+		LRK54_RS07780	0.76	-0.7
1,691,847	+		LRK54_RS07780	0.76	-1.3
1,691,848	-		LRK54_RS07780	0.76	-0.0
1,691,848	-		LRK54_RS07780	0.76	-0.7
1,691,848	-		LRK54_RS07780	0.76	+0.3
1,691,848	-		LRK54_RS07780	0.76	-0.3
1,691,848	-		LRK54_RS07780	0.76	+0.1
1,691,848	-		LRK54_RS07780	0.76	+0.8
1,691,848	-		LRK54_RS07780	0.76	-1.2
1,691,848	-		LRK54_RS07780	0.76	-0.8
1,691,848	-		LRK54_RS07780	0.76	-0.2
1,691,848	-		LRK54_RS07780	0.76	-0.1
1,691,848	-		LRK54_RS07780	0.76	+0.5
1,691,848	-		LRK54_RS07780	0.76	-0.5
1,691,849	-		LRK54_RS07780	0.76	-0.2
1,691,868	+		LRK54_RS07780	0.78	-0.3
1,691,868	+		LRK54_RS07780	0.78	-1.8
1,691,868	+		LRK54_RS07780	0.78	-0.6
1,691,868	+		LRK54_RS07780	0.78	-0.8
1,691,868	+		LRK54_RS07780	0.78	-1.1
1,691,868	+		LRK54_RS07780	0.78	-0.4
1,691,868	+		LRK54_RS07780	0.78	+0.0
1,691,868	+		LRK54_RS07780	0.78	-1.1
1,691,868	+		LRK54_RS07780	0.78	+0.3
1,691,868	+		LRK54_RS07780	0.78	-4.3
1,691,868	+		LRK54_RS07780	0.78	-0.8
1,691,869	-		LRK54_RS07780	0.78	+0.3
1,691,869	-		LRK54_RS07780	0.78	-0.1
1,691,869	-		LRK54_RS07780	0.78	-0.3
1,691,869	-		LRK54_RS07780	0.78	+0.2
1,691,869	-		LRK54_RS07780	0.78	-0.8
1,691,869	-		LRK54_RS07780	0.78	+0.1
1,691,869	-		LRK54_RS07780	0.78	-0.3
1,691,869	-		LRK54_RS07780	0.78	+0.7
1,691,869	-		LRK54_RS07780	0.78	-0.2
1,691,869	-		LRK54_RS07780	0.78	-0.3
1,691,869	-		LRK54_RS07780	0.78	+0.1
1,691,869	-		LRK54_RS07780	0.78	-0.0
1,691,869	-		LRK54_RS07780	0.78	+0.4
1,691,869	-		LRK54_RS07780	0.78	+0.4
1,691,869	-		LRK54_RS07780	0.78	+0.6
1,691,869	-		LRK54_RS07780	0.78	+0.3
1,692,027	+		LRK54_RS07780	0.89	-0.1
1,692,027	+		LRK54_RS07780	0.89	-0.6
1,692,027	+		LRK54_RS07780	0.89	-0.7
1,692,027	+		LRK54_RS07780	0.89	-1.2
1,692,027	+		LRK54_RS07780	0.89	-0.3
1,692,027	+		LRK54_RS07780	0.89	-0.7
1,692,027	+		LRK54_RS07780	0.89	-1.0
1,692,028	-		LRK54_RS07780	0.89	-0.4
1,692,028	-		LRK54_RS07780	0.89	+1.5
1,692,028	-		LRK54_RS07780	0.89	-1.0
1,692,028	-		LRK54_RS07780	0.89	-0.3
1,692,028	-		LRK54_RS07780	0.89	-1.3
1,692,028	-		LRK54_RS07780	0.89	+0.7
1,692,286	+				+0.3
1,692,286	+				-0.2
1,692,287	-				-0.0
1,692,287	-				+1.0
1,692,287	-				+0.2
1,692,333	+		LRK54_RS07785	0.11	+0.4
1,692,333	+		LRK54_RS07785	0.11	+0.4
1,692,333	+		LRK54_RS07785	0.11	+1.6
1,692,333	+		LRK54_RS07785	0.11	-2.2
1,692,333	+		LRK54_RS07785	0.11	+0.2
1,692,333	+		LRK54_RS07785	0.11	+0.0
1,692,333	+		LRK54_RS07785	0.11	-1.5
1,692,333	+		LRK54_RS07785	0.11	-0.2
1,692,333	+		LRK54_RS07785	0.11	-1.4
1,692,333	+		LRK54_RS07785	0.11	-0.3
1,692,333	+		LRK54_RS07785	0.11	+0.4
1,692,333	+		LRK54_RS07785	0.11	+0.1
1,692,333	+		LRK54_RS07785	0.11	-0.8
1,692,333	+		LRK54_RS07785	0.11	-0.0
1,692,333	+		LRK54_RS07785	0.11	-0.0
1,692,334	-		LRK54_RS07785	0.11	+0.4
1,692,334	-		LRK54_RS07785	0.11	-0.3
1,692,334	-		LRK54_RS07785	0.11	-0.0
1,692,334	-		LRK54_RS07785	0.11	-0.7
1,692,334	-		LRK54_RS07785	0.11	-1.1
1,692,334	-		LRK54_RS07785	0.11	+0.6
1,692,334	-		LRK54_RS07785	0.11	+1.0
1,692,334	-		LRK54_RS07785	0.11	+0.9
1,692,334	-		LRK54_RS07785	0.11	-0.2
1,692,334	-		LRK54_RS07785	0.11	+0.6
1,692,334	-		LRK54_RS07785	0.11	+0.5
1,692,334	-		LRK54_RS07785	0.11	+0.7
1,692,334	-		LRK54_RS07785	0.11	-0.5
1,692,334	-		LRK54_RS07785	0.11	+0.6
1,692,354	+		LRK54_RS07785	0.13	-0.4
1,692,355	-		LRK54_RS07785	0.13	+0.4
1,692,355	-		LRK54_RS07785	0.13	+0.7
1,692,355	-		LRK54_RS07785	0.13	-0.6
1,692,355	-		LRK54_RS07785	0.13	+0.6
1,692,355	-		LRK54_RS07785	0.13	+0.0
1,692,355	-		LRK54_RS07785	0.13	+0.5
1,692,355	-		LRK54_RS07785	0.13	-0.1
1,692,375	+		LRK54_RS07785	0.15	-0.7
1,692,375	+		LRK54_RS07785	0.15	+2.0
1,692,375	+		LRK54_RS07785	0.15	-0.8
1,692,375	+		LRK54_RS07785	0.15	-0.2
1,692,375	+		LRK54_RS07785	0.15	-0.8
1,692,375	+		LRK54_RS07785	0.15	-0.7
1,692,375	+		LRK54_RS07785	0.15	-0.7
1,692,375	+		LRK54_RS07785	0.15	-0.5
1,692,375	+		LRK54_RS07785	0.15	-0.3
1,692,375	+		LRK54_RS07785	0.15	-0.4
1,692,375	+		LRK54_RS07785	0.15	-0.3
1,692,375	+		LRK54_RS07785	0.15	+0.9
1,692,375	+		LRK54_RS07785	0.15	-0.0
1,692,375	+		LRK54_RS07785	0.15	+0.6
1,692,375	+		LRK54_RS07785	0.15	-0.2
1,692,376	-		LRK54_RS07785	0.15	-0.3
1,692,376	-		LRK54_RS07785	0.15	-0.4
1,692,376	-		LRK54_RS07785	0.15	+0.9
1,692,376	-		LRK54_RS07785	0.15	+0.2
1,692,376	-		LRK54_RS07785	0.15	-1.0
1,692,376	-		LRK54_RS07785	0.15	+0.3
1,692,376	-		LRK54_RS07785	0.15	+0.1
1,692,376	-		LRK54_RS07785	0.15	-0.1
1,692,376	-		LRK54_RS07785	0.15	+1.8
1,692,376	-		LRK54_RS07785	0.15	+0.1
1,692,376	-		LRK54_RS07785	0.15	+0.7
1,692,376	-		LRK54_RS07785	0.15	+0.4
1,692,376	-		LRK54_RS07785	0.15	-1.1
1,692,564	+		LRK54_RS07785	0.30	-1.1
1,692,564	+		LRK54_RS07785	0.30	-1.0
1,692,564	+		LRK54_RS07785	0.30	-0.7
1,692,564	+		LRK54_RS07785	0.30	+0.6
1,692,564	+		LRK54_RS07785	0.30	-1.5
1,692,564	+		LRK54_RS07785	0.30	-0.2
1,692,564	+		LRK54_RS07785	0.30	-1.3
1,692,564	+		LRK54_RS07785	0.30	+0.1
1,692,564	+		LRK54_RS07785	0.30	+0.4
1,692,565	-		LRK54_RS07785	0.30	+0.0
1,692,565	-		LRK54_RS07785	0.30	+0.1
1,692,565	-		LRK54_RS07785	0.30	+0.4
1,692,565	-		LRK54_RS07785	0.30	+0.0
1,692,565	-		LRK54_RS07785	0.30	+0.2
1,692,565	-		LRK54_RS07785	0.30	+0.9
1,692,565	-		LRK54_RS07785	0.30	+0.1
1,692,636	+		LRK54_RS07785	0.36	-0.5
1,692,636	+		LRK54_RS07785	0.36	-1.3
1,692,636	+		LRK54_RS07785	0.36	+0.2
1,692,636	+		LRK54_RS07785	0.36	-0.2
1,692,637	-		LRK54_RS07785	0.37	-0.5
1,692,637	-		LRK54_RS07785	0.37	+0.5
1,692,750	+		LRK54_RS07785	0.46	-0.1
1,692,750	+		LRK54_RS07785	0.46	-0.5
1,692,750	+		LRK54_RS07785	0.46	+0.4
1,692,750	+		LRK54_RS07785	0.46	-0.6
1,692,751	-		LRK54_RS07785	0.46	+0.0
1,692,751	-		LRK54_RS07785	0.46	+0.2
1,692,751	-		LRK54_RS07785	0.46	+0.1
1,692,751	-		LRK54_RS07785	0.46	+0.0
1,692,751	-		LRK54_RS07785	0.46	-0.7
1,692,751	-		LRK54_RS07785	0.46	+0.4
1,692,751	-		LRK54_RS07785	0.46	-0.3
1,692,751	-		LRK54_RS07785	0.46	-0.1
1,692,751	-		LRK54_RS07785	0.46	-0.3
1,692,751	-		LRK54_RS07785	0.46	-0.2
1,692,751	-		LRK54_RS07785	0.46	-0.1
1,692,751	-		LRK54_RS07785	0.46	-0.5
1,692,751	-		LRK54_RS07785	0.46	-0.2
1,692,882	+		LRK54_RS07785	0.57	-0.1
1,692,882	+		LRK54_RS07785	0.57	-0.4
1,692,882	+		LRK54_RS07785	0.57	-0.1
1,692,882	+		LRK54_RS07785	0.57	-0.5
1,692,882	+		LRK54_RS07785	0.57	-0.0
1,692,882	+		LRK54_RS07785	0.57	-0.9
1,692,882	+		LRK54_RS07785	0.57	-0.0
1,692,882	+		LRK54_RS07785	0.57	-1.0
1,692,882	+		LRK54_RS07785	0.57	-0.3
1,692,882	+		LRK54_RS07785	0.57	+0.8
1,692,882	+		LRK54_RS07785	0.57	-0.6
1,692,882	+		LRK54_RS07785	0.57	-0.6
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