Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1584

Experiment: Choline chloride 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 20 mM
1,658,880	+		Ga0059261_1583	0.73	+0.3
1,658,880	+		Ga0059261_1583	0.73	-0.0
1,658,880	+		Ga0059261_1583	0.73	-0.5
1,658,880	+		Ga0059261_1583	0.73	+0.0
1,658,881	-		Ga0059261_1583	0.73	+0.4
1,658,881	-		Ga0059261_1583	0.73	+1.0
1,658,910	+		Ga0059261_1583	0.74	+0.4
1,659,004	+		Ga0059261_1583	0.77	+0.2
1,659,005	-		Ga0059261_1583	0.78	+0.2
1,659,005	-		Ga0059261_1583	0.78	+0.5
1,659,005	-		Ga0059261_1583	0.78	-0.4
1,659,006	+		Ga0059261_1583	0.78	+0.6
1,659,006	+		Ga0059261_1583	0.78	-0.2
1,659,006	+		Ga0059261_1583	0.78	+0.5
1,659,006	+		Ga0059261_1583	0.78	-1.3
1,659,006	+		Ga0059261_1583	0.78	-1.1
1,659,006	+		Ga0059261_1583	0.78	+0.4
1,659,007	-		Ga0059261_1583	0.78	-0.6
1,659,007	-		Ga0059261_1583	0.78	-0.1
1,659,007	-		Ga0059261_1583	0.78	-0.8
1,659,007	-		Ga0059261_1583	0.78	-0.0
1,659,007	-		Ga0059261_1583	0.78	+0.3
1,659,007	-		Ga0059261_1583	0.78	-0.6
1,659,007	-		Ga0059261_1583	0.78	+0.4
1,659,007	-		Ga0059261_1583	0.78	+1.4
1,659,108	+		Ga0059261_1583	0.81	-1.4
1,659,108	+		Ga0059261_1583	0.81	-0.1
1,659,186	+		Ga0059261_1583	0.84	+1.1
1,659,186	+		Ga0059261_1583	0.84	+0.3
1,659,186	+		Ga0059261_1583	0.84	+0.1
1,659,186	+		Ga0059261_1583	0.84	-0.1
1,659,186	+		Ga0059261_1583	0.84	-0.1
1,659,186	+		Ga0059261_1583	0.84	-0.5
1,659,187	-		Ga0059261_1583	0.84	+0.1
1,659,187	-		Ga0059261_1583	0.84	-0.9
1,659,187	-		Ga0059261_1583	0.84	+0.2
1,659,187	-		Ga0059261_1583	0.84	+0.6
1,659,187	-		Ga0059261_1583	0.84	+2.1
1,659,187	-		Ga0059261_1583	0.84	-0.2
1,659,187	-		Ga0059261_1583	0.84	-0.4
1,659,220	-		Ga0059261_1583	0.85	-1.9
1,659,220	-		Ga0059261_1583	0.85	+0.4
1,659,388	-				+0.3
1,659,636	+				+0.2
1,659,636	+				+0.1
1,659,636	+				+1.3
1,659,636	+				-0.1
1,659,636	+				-0.9
1,659,637	-				+0.4
1,659,637	-				+0.5
1,659,637	-				+0.5
1,659,643	+				+0.7
1,659,643	+				-0.0
1,659,643	+				+0.4
1,659,643	+				+0.4
1,659,643	+				+0.9
1,659,643	+				-0.5
1,659,643	+				-0.4
1,659,643	+				+0.9
1,659,643	+				+0.8
1,659,643	+				+0.5
1,659,643	+				+0.3
1,659,643	+				-0.6
1,659,643	+				+0.4
1,659,643	+				-0.3
1,659,644	-				+0.3
1,659,644	-				+0.4
1,659,644	-				-0.3
1,659,644	-				+0.7
1,659,644	-				+1.7
1,659,644	-				-0.5
1,659,644	-				-0.3
1,659,644	-				-0.1
1,659,644	-				-0.4
1,659,644	-				-0.1
1,659,709	+				-0.6
1,659,709	+				+1.0
1,659,709	+				-0.9
1,659,709	+				-0.2
1,659,709	+				+1.0
1,659,709	+				+0.0
1,659,710	-				-0.4
1,659,710	-				+0.1
1,659,710	-				-2.1
1,659,710	-				-0.1
1,659,710	-				-0.1
1,659,710	-				-0.5
1,659,710	-				+0.4
1,659,747	+				+1.1
1,659,747	+				+0.5
1,659,747	+				-0.4
1,659,747	+				+0.3
1,659,748	-				+0.4
1,659,748	-				+0.5
1,659,748	-				+0.3
1,659,748	-				-0.3
1,659,748	-				-0.5
1,659,748	-				+0.6
1,659,748	-				-0.5
1,659,748	-				+0.1
1,659,748	-				+0.3
1,659,748	-				+0.1
1,659,748	-				+0.7
1,659,751	+				-0.8
1,659,751	+				+0.0
1,659,751	+				-1.2
1,659,751	+				+0.2
1,659,751	+				-0.9
1,659,751	+				+0.6
1,659,751	+				+0.7
1,659,751	+				+0.2
1,659,751	+				+0.2
1,659,752	-				+0.5
1,659,752	-				+0.6
1,659,752	-				-0.9
1,659,752	-				+0.7
1,659,752	-				+0.5
1,659,752	-				+0.9
1,659,752	-				+0.2
1,659,752	-				+0.7
1,659,752	-				+1.1
1,659,752	-				+0.9
1,659,877	+				+0.3
1,660,019	+		Ga0059261_1584	0.14	-0.8
1,660,020	-		Ga0059261_1584	0.14	-0.2
1,660,226	+		Ga0059261_1584	0.34	+0.5
1,660,226	+		Ga0059261_1584	0.34	+0.6
1,660,226	+		Ga0059261_1584	0.34	-0.5
1,660,227	-		Ga0059261_1584	0.34	-0.3
1,660,227	-		Ga0059261_1584	0.34	+0.6
1,660,227	-		Ga0059261_1584	0.34	+1.1
1,660,227	-		Ga0059261_1584	0.34	+0.1
1,660,268	+		Ga0059261_1584	0.38	-0.2
1,660,277	+		Ga0059261_1584	0.39	+0.2
1,660,277	+		Ga0059261_1584	0.39	-0.1
1,660,277	+		Ga0059261_1584	0.39	-2.1
1,660,278	-		Ga0059261_1584	0.39	+0.6
1,660,278	-		Ga0059261_1584	0.39	-0.5
1,660,286	+		Ga0059261_1584	0.40	+0.0
1,660,287	-		Ga0059261_1584	0.40	+0.4
1,660,287	-		Ga0059261_1584	0.40	-0.7
1,660,321	+		Ga0059261_1584	0.43	+0.4
1,660,322	-		Ga0059261_1584	0.43	+1.1
1,660,603	+		Ga0059261_1584	0.70	+0.3
1,660,603	+				+0.1
1,660,733	-		Ga0059261_1584	0.83	+0.9
1,660,773	+		Ga0059261_1584	0.87	-0.2
1,660,774	-		Ga0059261_1584	0.87	-0.1
1,660,774	-		Ga0059261_1584	0.87	+0.0
1,660,829	-				-0.2
1,660,854	+				+1.3
1,660,854	+				-0.1
1,660,854	+				+0.1
1,660,854	+				+0.0
1,660,854	+				-0.6
1,660,854	+				-0.3
1,660,855	-				-0.1
1,660,855	-				+0.1
1,660,855	-				+0.0
1,660,855	-				+0.9
1,660,855	-				+1.1
1,660,855	-				-0.6
1,660,904	+				+0.1
1,660,905	-				+0.3
1,661,080	+				-0.6
1,661,080	+				+1.1
1,661,080	+				+0.0
1,661,080	+				-0.0
1,661,080	+				+0.4
1,661,080	+				-2.2
1,661,080	+				-0.2
1,661,080	+				+0.8
1,661,080	+				+1.3
1,661,081	-				+0.6
1,661,081	-				+0.4
1,661,081	-				+0.8
1,661,081	-				+0.1
1,661,081	-				-0.6
1,661,081	-				+0.5
1,661,211	+				-0.2
1,661,279	+		Ga0059261_1585	0.13	+0.8
1,661,279	+		Ga0059261_1585	0.13	-0.0
1,661,279	+		Ga0059261_1585	0.13	+0.5
1,661,279	+				+1.1
1,661,279	+		Ga0059261_1585	0.13	+0.4
1,661,279	+		Ga0059261_1585	0.13	+0.5
1,661,279	+		Ga0059261_1585	0.13	+1.1
1,661,279	+		Ga0059261_1585	0.13	+0.0
1,661,280	-		Ga0059261_1585	0.13	-0.1
1,661,280	-		Ga0059261_1585	0.13	+1.4
1,661,280	-		Ga0059261_1585	0.13	-0.5
1,661,280	-				+1.7
1,661,280	-		Ga0059261_1585	0.13	-0.3
1,661,280	-				+1.5
1,661,280	-		Ga0059261_1585	0.13	+0.6
1,661,280	-		Ga0059261_1585	0.13	+0.8
1,661,325	+		Ga0059261_1585	0.16	-0.5
1,661,325	+		Ga0059261_1585	0.16	+0.7
1,661,326	-		Ga0059261_1585	0.16	+0.3
1,661,326	-		Ga0059261_1585	0.16	+1.2
1,661,326	-		Ga0059261_1585	0.16	-0.8
1,661,502	+		Ga0059261_1585	0.28	+1.7
1,661,582	-		Ga0059261_1585	0.34	+0.6
1,661,582	-		Ga0059261_1585	0.34	+0.1
1,661,583	+		Ga0059261_1585	0.34	+0.9
1,661,626	-		Ga0059261_1585	0.37	+0.5
1,661,626	-		Ga0059261_1585	0.37	-0.1
1,661,695	-		Ga0059261_1585	0.41	-0.2
1,661,695	-		Ga0059261_1585	0.41	+0.1
1,661,695	-		Ga0059261_1585	0.41	+0.1
1,661,853	+		Ga0059261_1585	0.52	-0.3
1,661,859	+		Ga0059261_1585	0.52	+0.4
1,661,859	+		Ga0059261_1585	0.52	+0.9
1,661,859	+		Ga0059261_1585	0.52	+0.1
1,661,859	+		Ga0059261_1585	0.52	+0.3
1,661,859	+		Ga0059261_1585	0.52	+0.3
1,661,859	+		Ga0059261_1585	0.52	-0.2
1,661,859	+		Ga0059261_1585	0.52	+0.3
1,661,859	+		Ga0059261_1585	0.52	-0.5
1,661,859	+		Ga0059261_1585	0.52	+0.4
1,661,859	+		Ga0059261_1585	0.52	+0.8
1,661,860	-		Ga0059261_1585	0.52	+0.0
1,661,860	-		Ga0059261_1585	0.52	+0.0
1,661,860	-		Ga0059261_1585	0.52	-0.8
1,661,860	-		Ga0059261_1585	0.52	+0.1
1,661,860	-		Ga0059261_1585	0.52	+0.4
1,661,860	-		Ga0059261_1585	0.52	+0.5
1,661,860	-		Ga0059261_1585	0.52	-0.1
1,661,860	-		Ga0059261_1585	0.52	+0.8
1,661,860	-		Ga0059261_1585	0.52	+0.0