Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03450

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
3,614,504	+		CCNA_03449	0.37	+1.1
3,614,504	+		CCNA_03449	0.37	-1.3
3,614,504	+		CCNA_03449	0.37	-1.6
3,614,504	+		CCNA_03449	0.37	+0.4
3,614,504	+		CCNA_03449	0.37	+0.2
3,614,504	+		CCNA_03449	0.37	-0.2
3,614,511	+		CCNA_03449	0.37	+1.2
3,614,511	+		CCNA_03449	0.37	-1.6
3,614,512	-		CCNA_03449	0.37	+1.9
3,614,512	-		CCNA_03449	0.37	-1.1
3,614,512	-		CCNA_03449	0.37	+0.8
3,614,512	-		CCNA_03449	0.37	-3.0
3,614,512	-		CCNA_03449	0.37	-0.4
3,614,512	-		CCNA_03449	0.37	+1.8
3,614,512	-		CCNA_03449	0.37	+1.7
3,614,512	-		CCNA_03449	0.37	-0.9
3,614,532	+		CCNA_03449	0.39	+2.3
3,614,532	+		CCNA_03449	0.39	-1.9
3,614,532	+		CCNA_03449	0.39	+1.0
3,614,552	+		CCNA_03449	0.40	+1.1
3,614,552	+		CCNA_03449	0.40	-1.2
3,614,557	+		CCNA_03449	0.40	+3.7
3,614,557	+		CCNA_03449	0.40	-2.3
3,614,558	+		CCNA_03449	0.40	-0.2
3,614,560	-		CCNA_03449	0.40	-0.2
3,614,560	-		CCNA_03449	0.40	-1.6
3,614,565	-		CCNA_03449	0.41	-0.7
3,614,568	-		CCNA_03449	0.41	+0.2
3,614,575	+		CCNA_03449	0.41	+1.1
3,614,583	-				+0.6
3,614,599	-		CCNA_03449	0.43	-3.5
3,614,605	+		CCNA_03449	0.43	-3.8
3,614,622	+		CCNA_03449	0.44	+1.3
3,614,640	-		CCNA_03449	0.46	-0.7
3,614,645	-		CCNA_03449	0.46	-1.9
3,614,650	+		CCNA_03449	0.46	-1.4
3,614,680	+		CCNA_03449	0.48	+2.5
3,614,680	+		CCNA_03449	0.48	-1.0
3,614,680	+		CCNA_03449	0.48	-0.2
3,614,680	+		CCNA_03449	0.48	+0.1
3,614,688	-		CCNA_03449	0.49	+2.1
3,614,688	-		CCNA_03449	0.49	+0.6
3,614,697	-		CCNA_03449	0.49	-2.3
3,614,737	-		CCNA_03449	0.52	+2.7
3,614,739	-		CCNA_03449	0.52	-1.0
3,614,744	-		CCNA_03449	0.52	+1.1
3,614,744	-		CCNA_03449	0.52	-1.6
3,614,771	+		CCNA_03449	0.54	-0.6
3,614,771	+		CCNA_03449	0.54	-1.6
3,614,809	+		CCNA_03449	0.57	-1.1
3,614,816	-		CCNA_03449	0.57	+0.8
3,614,819	+		CCNA_03449	0.57	-1.9
3,614,854	+		CCNA_03449	0.60	-1.3
3,614,854	+		CCNA_03449	0.60	+0.3
3,614,909	+		CCNA_03449	0.63	+1.2
3,614,914	+		CCNA_03449	0.64	-0.9
3,614,939	+		CCNA_03449	0.65	-2.5
3,614,947	-				+2.1
3,614,967	-		CCNA_03449	0.67	+0.1
3,615,004	+				+1.1
3,615,007	-		CCNA_03449	0.70	-3.2
3,615,032	+		CCNA_03449	0.71	-0.4
3,615,033	+		CCNA_03449	0.71	+1.9
3,615,110	+		CCNA_03449	0.76	-2.5
3,615,110	+		CCNA_03449	0.76	+1.7
3,615,118	-		CCNA_03449	0.77	+0.9
3,615,141	+		CCNA_03449	0.78	+2.1
3,615,217	+		CCNA_03449	0.83	-1.8
3,615,238	+		CCNA_03449	0.85	+1.2
3,615,242	-		CCNA_03449	0.85	-2.6
3,615,269	+		CCNA_03449	0.87	-2.6
3,615,312	-		CCNA_03449	0.89	-0.6
3,615,314	+		CCNA_03449	0.90	-1.2
3,615,314	+		CCNA_03449	0.90	-1.8
3,615,319	+				-2.5
3,615,322	-				-1.5
3,615,322	-				+0.9
3,615,322	-				+1.7
3,615,322	-				+1.7
3,615,322	-				+2.5
3,615,322	-				+1.0
3,615,366	+				+0.0
3,615,400	+				-0.9
3,615,426	-				-0.7
3,615,447	-				-0.3
3,615,475	+				+3.9
3,615,488	-				+1.0
3,615,561	-		CCNA_03450	0.27	+0.1
3,615,567	+		CCNA_03450	0.28	-2.0
3,615,574	-				-0.2
3,615,612	-		CCNA_03450	0.42	+3.3
3,615,626	+		CCNA_03450	0.46	+0.4
3,615,647	-		CCNA_03450	0.52	-2.2
3,615,667	-		CCNA_03450	0.58	+1.8
3,615,727	+		CCNA_03450	0.76	+1.9
3,615,727	+		CCNA_03450	0.76	-2.6
3,615,732	+		CCNA_03450	0.77	-0.7
3,615,732	+		CCNA_03450	0.77	-0.5
3,615,732	+		CCNA_03450	0.77	+0.3
3,615,732	+		CCNA_03450	0.77	-0.3
3,615,732	+		CCNA_03450	0.77	+3.2
3,615,732	+		CCNA_03450	0.77	+0.1
3,615,732	+		CCNA_03450	0.77	+0.4
3,615,732	+		CCNA_03450	0.77	+1.2
3,615,802	-				-0.5
3,615,802	-				-2.1
3,615,802	-				+1.4
3,615,804	+				-0.8
3,615,804	+				+3.3
3,615,804	+				-2.3
3,615,804	+				-0.2
3,615,804	+				+2.2
3,615,804	+				+2.5
3,615,804	+				-0.2
3,615,804	+				-2.3
3,615,812	-				-1.2
3,615,812	-				+1.9
3,615,812	-				+0.9
3,615,812	-				-0.7
3,615,812	-				+3.8
3,615,817	-				-2.2
3,615,849	+				-1.8
3,615,891	+				+2.3
3,615,896	+				+0.0
3,615,898	+				+3.1
3,615,899	-				+1.9
3,615,948	-				+1.7
3,615,997	-				-1.0
3,615,997	-				+0.2
3,616,001	+				+1.1
3,616,001	+				-0.9
3,616,009	-				+1.7
3,616,009	-				+2.3
3,616,075	-				+4.0
3,616,075	-				+0.8
3,616,077	+				+1.6
3,616,085	-				+0.7
3,616,102	+				-0.2
3,616,102	+				-0.6
3,616,102	+				-0.2
3,616,102	+				-0.7
3,616,102	+				+2.8
3,616,102	+				+1.2
3,616,102	+				+2.5
3,616,102	+				+2.0
3,616,102	+				+2.8
3,616,102	+				-1.8
3,616,110	-				-1.6
3,616,123	-				-2.4
3,616,138	+				-2.4
3,616,146	+				-0.4
3,616,146	-				-0.4
3,616,146	-				+0.6
3,616,146	-				-1.7
3,616,161	+				-1.0
3,616,163	+				-2.8
3,616,178	+				-0.6
3,616,191	-				-1.7
3,616,217	-				-0.3
3,616,257	-		CCNA_03451	0.25	+0.7
3,616,257	-		CCNA_03451	0.25	+2.7
3,616,263	+		CCNA_03451	0.28	+0.8
3,616,266	-		CCNA_03451	0.29	+2.0
3,616,285	-		CCNA_03451	0.37	-1.2
3,616,292	+		CCNA_03451	0.40	+0.9
3,616,292	+		CCNA_03451	0.40	-1.4
3,616,292	+		CCNA_03451	0.40	+0.0
3,616,314	-		CCNA_03451	0.50	-1.6
3,616,322	+		CCNA_03451	0.54	-2.5
3,616,330	-		CCNA_03451	0.57	-1.2
3,616,330	-		CCNA_03451	0.57	+1.1
3,616,366	-		CCNA_03451	0.73	-2.0
3,616,369	+		CCNA_03451	0.75	+0.5
3,616,378	+		CCNA_03451	0.79	-1.3
3,616,392	+		CCNA_03451	0.85	-1.2
3,616,392	+		CCNA_03451	0.85	-0.7
3,616,392	+		CCNA_03451	0.85	+0.9
3,616,392	+		CCNA_03451	0.85	-1.9
3,616,392	+		CCNA_03451	0.85	+0.8
3,616,392	+		CCNA_03451	0.85	-3.0
3,616,400	-		CCNA_03451	0.88	+2.1
3,616,400	-		CCNA_03451	0.88	-1.3
3,616,400	-		CCNA_03451	0.88	+0.6
3,616,400	-		CCNA_03451	0.88	-1.2
3,616,401	-		CCNA_03451	0.89	-0.4
3,616,416	+				-0.1
3,616,441	+				+0.6
3,616,441	+				-2.8
3,616,505	-		CCNA_03452	0.21	+2.3
3,616,505	-		CCNA_03452	0.21	+0.3
3,616,505	-		CCNA_03452	0.21	-1.0
3,616,505	-		CCNA_03452	0.21	+0.7
3,616,505	-		CCNA_03452	0.21	+1.6
3,616,505	-		CCNA_03452	0.21	-1.4
3,616,600	+		CCNA_03452	0.61	-0.1
3,616,610	+		CCNA_03452	0.65	+2.2
3,616,652	+		CCNA_03452	0.82	+1.2
3,616,696	-				-1.1
3,616,709	+				+1.8
3,616,709	+				+2.1
3,616,717	-				-0.6
3,616,765	-				-2.2